RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 KANK1Q14678 1352 aa17.44■□□□□ 0.38
TRAPPC12-219ENST00000479955 GGT6Q6P531 493 aa17.44■□□□□ 0.38
TRAPPC12-219ENST00000479955 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
TRAPPC12-219ENST00000479955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRAPPC12-219ENST00000479955 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
TRAPPC12-219ENST00000479955 RNF17Q9BXT8 1623 aaKnown RBP17.42■□□□□ 0.38
TRAPPC12-219ENST00000479955 DEPDC5O75140 1603 aa17.41■□□□□ 0.38
TRAPPC12-219ENST00000479955 UNC13BO14795 1591 aa17.4■□□□□ 0.38
TRAPPC12-219ENST00000479955 NUP155O75694 1391 aa17.4■□□□□ 0.38
TRAPPC12-219ENST00000479955 FAM135AQ9P2D6 1515 aa17.39■□□□□ 0.37
TRAPPC12-219ENST00000479955 MLECQ14165 292 aa17.39■□□□□ 0.37
TRAPPC12-219ENST00000479955 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
TRAPPC12-219ENST00000479955 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
TRAPPC12-219ENST00000479955 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC12-219ENST00000479955 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
TRAPPC12-219ENST00000479955 KDM5DQ9BY66 1539 aa17.35■□□□□ 0.37
TRAPPC12-219ENST00000479955 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
TRAPPC12-219ENST00000479955 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
TRAPPC12-219ENST00000479955 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
TRAPPC12-219ENST00000479955 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
TRAPPC12-219ENST00000479955 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.37
TRAPPC12-219ENST00000479955 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
TRAPPC12-219ENST00000479955 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
TRAPPC12-219ENST00000479955 ABCC3O15438 1527 aa17.3■□□□□ 0.36
TRAPPC12-219ENST00000479955 TET3O43151 1660 aa17.29■□□□□ 0.36
TRAPPC12-219ENST00000479955 ADAMTSL3P82987 1691 aa17.29■□□□□ 0.36
TRAPPC12-219ENST00000479955 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
TRAPPC12-219ENST00000479955 PZPP20742 1482 aa17.28■□□□□ 0.36
TRAPPC12-219ENST00000479955 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
TRAPPC12-219ENST00000479955 CEP152O94986 1710 aa17.27■□□□□ 0.36
TRAPPC12-219ENST00000479955 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.35
TRAPPC12-219ENST00000479955 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
TRAPPC12-219ENST00000479955 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
TRAPPC12-219ENST00000479955 PKD2Q13563 968 aa17.26■□□□□ 0.35
TRAPPC12-219ENST00000479955 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
TRAPPC12-219ENST00000479955 CAMSAP1Q5T5Y3 1602 aa17.25■□□□□ 0.35
TRAPPC12-219ENST00000479955 EFCAB6Q5THR3 1501 aa17.25■□□□□ 0.35
TRAPPC12-219ENST00000479955 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
TRAPPC12-219ENST00000479955 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-219ENST00000479955 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-219ENST00000479955 E9PCH4 1651 aa17.2■□□□□ 0.34
TRAPPC12-219ENST00000479955 NPATQ14207 1427 aa17.2■□□□□ 0.34
TRAPPC12-219ENST00000479955 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-219ENST00000479955 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
TRAPPC12-219ENST00000479955 C3P01024 1663 aa17.17■□□□□ 0.34
TRAPPC12-219ENST00000479955 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
TRAPPC12-219ENST00000479955 PTPRMP28827 1452 aa17.16■□□□□ 0.34
TRAPPC12-219ENST00000479955 PTPRTO14522 1441 aa17.15■□□□□ 0.34
TRAPPC12-219ENST00000479955 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-219ENST00000479955 FOXD1Q16676 465 aa17.15■□□□□ 0.34
TRAPPC12-219ENST00000479955 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
TRAPPC12-219ENST00000479955 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-219ENST00000479955 NOS1P29475 1434 aa17.14■□□□□ 0.33
TRAPPC12-219ENST00000479955 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
TRAPPC12-219ENST00000479955 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
TRAPPC12-219ENST00000479955 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
TRAPPC12-219ENST00000479955 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-219ENST00000479955 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
TRAPPC12-219ENST00000479955 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
TRAPPC12-219ENST00000479955 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
TRAPPC12-219ENST00000479955 TNRQ92752 1358 aa17.12■□□□□ 0.33
TRAPPC12-219ENST00000479955 TRPM2O94759 1503 aa17.11■□□□□ 0.33
TRAPPC12-219ENST00000479955 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
TRAPPC12-219ENST00000479955 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-219ENST00000479955 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
TRAPPC12-219ENST00000479955 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
TRAPPC12-219ENST00000479955 SYNMO15061 1565 aa17.06■□□□□ 0.32
TRAPPC12-219ENST00000479955 IDI1Q13907 227 aa17.06■□□□□ 0.32
TRAPPC12-219ENST00000479955 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
TRAPPC12-219ENST00000479955 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
TRAPPC12-219ENST00000479955 KIF1BO60333 1816 aa17.03■□□□□ 0.32
TRAPPC12-219ENST00000479955 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-219ENST00000479955 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
TRAPPC12-219ENST00000479955 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
TRAPPC12-219ENST00000479955 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
TRAPPC12-219ENST00000479955 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-219ENST00000479955 TIMELESSQ9UNS1 1208 aa17.01■□□□□ 0.31
TRAPPC12-219ENST00000479955 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
TRAPPC12-219ENST00000479955 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
TRAPPC12-219ENST00000479955 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
TRAPPC12-219ENST00000479955 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
TRAPPC12-219ENST00000479955 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
TRAPPC12-219ENST00000479955 UGGT1Q9NYU2 1555 aa17■□□□□ 0.31
TRAPPC12-219ENST00000479955 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
TRAPPC12-219ENST00000479955 RPGRIP1LQ68CZ1 1315 aa16.98■□□□□ 0.31
TRAPPC12-219ENST00000479955 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
TRAPPC12-219ENST00000479955 ADGRB3O60242 1522 aa16.97■□□□□ 0.31
TRAPPC12-219ENST00000479955 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-219ENST00000479955 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-219ENST00000479955 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.31
TRAPPC12-219ENST00000479955 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
TRAPPC12-219ENST00000479955 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
TRAPPC12-219ENST00000479955 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC12-219ENST00000479955 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
TRAPPC12-219ENST00000479955 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
TRAPPC12-219ENST00000479955 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC12-219ENST00000479955 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRAPPC12-219ENST00000479955 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
TRAPPC12-219ENST00000479955 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC12-219ENST00000479955 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms