RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PKD2Q13563 968 aa16.35■□□□□ 0.21
APTX-223ENST00000479656 A2MP01023 1474 aa16.34■□□□□ 0.21
APTX-223ENST00000479656 KDM5DQ9BY66 1539 aa16.33■□□□□ 0.2
APTX-223ENST00000479656 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
APTX-223ENST00000479656 UNC13BO14795 1591 aa16.32■□□□□ 0.2
APTX-223ENST00000479656 ABCA6Q8N139 1617 aa16.32■□□□□ 0.2
APTX-223ENST00000479656 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
APTX-223ENST00000479656 DIP2CQ9Y2E4 1556 aa16.29■□□□□ 0.2
APTX-223ENST00000479656 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
APTX-223ENST00000479656 ANKRD30BQ9BXX2 1392 aa16.29■□□□□ 0.2
APTX-223ENST00000479656 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
APTX-223ENST00000479656 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
APTX-223ENST00000479656 GGT6Q6P531 493 aa16.27■□□□□ 0.19
APTX-223ENST00000479656 IQGAP3Q86VI3 1631 aa16.26■□□□□ 0.19
APTX-223ENST00000479656 KANK1Q14678 1352 aa16.25■□□□□ 0.19
APTX-223ENST00000479656 ATP10AO60312 1499 aa16.25■□□□□ 0.19
APTX-223ENST00000479656 DEPDC5O75140 1603 aa16.25■□□□□ 0.19
APTX-223ENST00000479656 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
APTX-223ENST00000479656 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
APTX-223ENST00000479656 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
APTX-223ENST00000479656 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
APTX-223ENST00000479656 VWDEQ8N2E2 1590 aa16.2■□□□□ 0.18
APTX-223ENST00000479656 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
APTX-223ENST00000479656 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
APTX-223ENST00000479656 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
APTX-223ENST00000479656 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
APTX-223ENST00000479656 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
APTX-223ENST00000479656 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
APTX-223ENST00000479656 REREQ9P2R6 1566 aa16.16■□□□□ 0.18
APTX-223ENST00000479656 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
APTX-223ENST00000479656 L3MBTL2Q969R5 705 aa16.15■□□□□ 0.18
APTX-223ENST00000479656 E9PCH4 1651 aa16.15■□□□□ 0.18
APTX-223ENST00000479656 TET3O43151 1660 aa16.15■□□□□ 0.18
APTX-223ENST00000479656 MLECQ14165 292 aa16.14■□□□□ 0.17
APTX-223ENST00000479656 AGLP35573 1532 aa16.13■□□□□ 0.17
APTX-223ENST00000479656 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
APTX-223ENST00000479656 CEP152O94986 1710 aa16.13■□□□□ 0.17
APTX-223ENST00000479656 SIGLEC1Q9BZZ2 1709 aa16.12■□□□□ 0.17
APTX-223ENST00000479656 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
APTX-223ENST00000479656 ABCC3O15438 1527 aa16.11■□□□□ 0.17
APTX-223ENST00000479656 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
APTX-223ENST00000479656 EFCAB6Q5THR3 1501 aa16.1■□□□□ 0.17
APTX-223ENST00000479656 PTPRTO14522 1441 aa16.09■□□□□ 0.17
APTX-223ENST00000479656 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.17
APTX-223ENST00000479656 NPATQ14207 1427 aa16.08■□□□□ 0.16
APTX-223ENST00000479656 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
APTX-223ENST00000479656 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
APTX-223ENST00000479656 CAMSAP1Q5T5Y3 1602 aa16.05■□□□□ 0.16
APTX-223ENST00000479656 TRPM2O94759 1503 aa16.05■□□□□ 0.16
APTX-223ENST00000479656 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
APTX-223ENST00000479656 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
APTX-223ENST00000479656 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
APTX-223ENST00000479656 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
APTX-223ENST00000479656 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
APTX-223ENST00000479656 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
APTX-223ENST00000479656 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
APTX-223ENST00000479656 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
APTX-223ENST00000479656 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
APTX-223ENST00000479656 FBXO31Q5XUX0 539 aaPredicted RBP16.01■□□□□ 0.15
APTX-223ENST00000479656 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
APTX-223ENST00000479656 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
APTX-223ENST00000479656 CLTCQ00610 1675 aaKnown RBP16■□□□□ 0.15
APTX-223ENST00000479656 NOS1P29475 1434 aa16■□□□□ 0.15
APTX-223ENST00000479656 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
APTX-223ENST00000479656 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
APTX-223ENST00000479656 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
APTX-223ENST00000479656 ZMYM3Q14202 1370 aa15.97■□□□□ 0.15
APTX-223ENST00000479656 IDI1Q13907 227 aa15.95■□□□□ 0.14
APTX-223ENST00000479656 SYNMO15061 1565 aa15.95■□□□□ 0.14
APTX-223ENST00000479656 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
APTX-223ENST00000479656 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
APTX-223ENST00000479656 PREX1Q8TCU6 1659 aa15.93■□□□□ 0.14
APTX-223ENST00000479656 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
APTX-223ENST00000479656 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
APTX-223ENST00000479656 KIF1BO60333 1816 aa15.92■□□□□ 0.14
APTX-223ENST00000479656 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
APTX-223ENST00000479656 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
APTX-223ENST00000479656 NEURL4Q96JN8 1562 aa15.9■□□□□ 0.14
APTX-223ENST00000479656 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
APTX-223ENST00000479656 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
APTX-223ENST00000479656 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
APTX-223ENST00000479656 SPATA31D1Q6ZQQ2 1576 aa15.88■□□□□ 0.13
APTX-223ENST00000479656 ADGRB3O60242 1522 aa15.88■□□□□ 0.13
APTX-223ENST00000479656 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
APTX-223ENST00000479656 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
APTX-223ENST00000479656 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
APTX-223ENST00000479656 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
APTX-223ENST00000479656 NBPF1Q3BBV0 1214 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 RALGAPBQ86X10 1494 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
APTX-223ENST00000479656 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.13
APTX-223ENST00000479656 TNRQ92752 1358 aa15.83■□□□□ 0.13
APTX-223ENST00000479656 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
APTX-223ENST00000479656 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
APTX-223ENST00000479656 TRPM1Q7Z4N2 1603 aa15.82■□□□□ 0.12
APTX-223ENST00000479656 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
APTX-223ENST00000479656 C3P01024 1663 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms