RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 RBM33Q96EV2 1170 aaKnown RBP10.7□□□□□ -0.7
CMSS1-204ENST00000479555 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
CMSS1-204ENST00000479555 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
CMSS1-204ENST00000479555 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
CMSS1-204ENST00000479555 BCAMP50895 628 aa10.65□□□□□ -0.7
CMSS1-204ENST00000479555 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
CMSS1-204ENST00000479555 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
CMSS1-204ENST00000479555 SEPT9Q9UHD8 586 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-204ENST00000479555 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
CMSS1-204ENST00000479555 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
CMSS1-204ENST00000479555 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
CMSS1-204ENST00000479555 EPAS1Q99814 870 aa10.62□□□□□ -0.71
CMSS1-204ENST00000479555 NBR1Q14596 966 aa10.61□□□□□ -0.71
CMSS1-204ENST00000479555 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
CMSS1-204ENST00000479555 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-204ENST00000479555 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
CMSS1-204ENST00000479555 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
CMSS1-204ENST00000479555 PDIA6Q15084 440 aa10.58□□□□□ -0.72
CMSS1-204ENST00000479555 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
CMSS1-204ENST00000479555 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
CMSS1-204ENST00000479555 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
CMSS1-204ENST00000479555 MAP3K7O43318 606 aa10.57□□□□□ -0.72
CMSS1-204ENST00000479555 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
CMSS1-204ENST00000479555 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-204ENST00000479555 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CMSS1-204ENST00000479555 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
CMSS1-204ENST00000479555 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
CMSS1-204ENST00000479555 GRXCR2A6NFK2 248 aa10.53□□□□□ -0.72
CMSS1-204ENST00000479555 E2F4Q16254 413 aa10.53□□□□□ -0.72
CMSS1-204ENST00000479555 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
CMSS1-204ENST00000479555 A0A0G2JS52 829 aa10.52□□□□□ -0.73
CMSS1-204ENST00000479555 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
CMSS1-204ENST00000479555 SMAPO00193 183 aa10.51□□□□□ -0.73
CMSS1-204ENST00000479555 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
CMSS1-204ENST00000479555 FAM98CQ17RN3 349 aaKnown RBP10.5□□□□□ -0.73
CMSS1-204ENST00000479555 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
CMSS1-204ENST00000479555 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-204ENST00000479555 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-204ENST00000479555 CDHR5Q9HBB8 845 aa10.49□□□□□ -0.73
CMSS1-204ENST00000479555 WDR70Q9NW82 654 aa10.48□□□□□ -0.73
CMSS1-204ENST00000479555 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
CMSS1-204ENST00000479555 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
CMSS1-204ENST00000479555 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
CMSS1-204ENST00000479555 LRCH3Q96II8 777 aa10.45□□□□□ -0.74
CMSS1-204ENST00000479555 ITGBL1O95965 494 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-204ENST00000479555 PACS2Q86VP3 889 aa10.44□□□□□ -0.74
CMSS1-204ENST00000479555 OSBPP22059 807 aa10.43□□□□□ -0.74
CMSS1-204ENST00000479555 PRSS12P56730 875 aa10.43□□□□□ -0.74
CMSS1-204ENST00000479555 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
CMSS1-204ENST00000479555 ARIH1Q9Y4X5 557 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-204ENST00000479555 SAMD7Q7Z3H4 446 aa10.41□□□□□ -0.74
CMSS1-204ENST00000479555 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
CMSS1-204ENST00000479555 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
CMSS1-204ENST00000479555 TATDN2Q93075 761 aa10.38□□□□□ -0.75
CMSS1-204ENST00000479555 KCNC4Q03721 635 aa10.37□□□□□ -0.75
CMSS1-204ENST00000479555 NYAP1Q6ZVC0 841 aa10.37□□□□□ -0.75
CMSS1-204ENST00000479555 IRX2Q9BZI1 471 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-204ENST00000479555 RGS20O76081 388 aa10.36□□□□□ -0.75
CMSS1-204ENST00000479555 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
CMSS1-204ENST00000479555 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
CMSS1-204ENST00000479555 RNF40O75150 1001 aa10.35□□□□□ -0.75
CMSS1-204ENST00000479555 PPP4CP60510 307 aa10.35□□□□□ -0.75
CMSS1-204ENST00000479555 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-204ENST00000479555 PADI6Q6TGC4 694 aa10.34□□□□□ -0.75
CMSS1-204ENST00000479555 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
CMSS1-204ENST00000479555 NPDC1Q9NQX5 325 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-204ENST00000479555 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
CMSS1-204ENST00000479555 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
CMSS1-204ENST00000479555 MTRQ99707 1265 aa10.29□□□□□ -0.76
CMSS1-204ENST00000479555 APLP1P51693 650 aa10.28□□□□□ -0.76
CMSS1-204ENST00000479555 ZNF516Q92618 1163 aa10.28□□□□□ -0.76
CMSS1-204ENST00000479555 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
CMSS1-204ENST00000479555 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
CMSS1-204ENST00000479555 RBM27Q9P2N5 1060 aaKnown RBP10.26□□□□□ -0.77
CMSS1-204ENST00000479555 NKX2-3Q8TAU0 364 aa10.23□□□□□ -0.77
CMSS1-204ENST00000479555 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
CMSS1-204ENST00000479555 IL21Q9HBE4 155 aa10.22□□□□□ -0.77
CMSS1-204ENST00000479555 COPS2P61201 443 aa10.21□□□□□ -0.77
CMSS1-204ENST00000479555 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
CMSS1-204ENST00000479555 EYA1Q99502 592 aa10.21□□□□□ -0.77
CMSS1-204ENST00000479555 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
CMSS1-204ENST00000479555 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
CMSS1-204ENST00000479555 Q6ZNB5 142 aa10.19□□□□□ -0.78
CMSS1-204ENST00000479555 PTGDRQ13258 359 aa10.17□□□□□ -0.78
CMSS1-204ENST00000479555 PRKD2Q9BZL6 878 aa10.17□□□□□ -0.78
CMSS1-204ENST00000479555 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
CMSS1-204ENST00000479555 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
CMSS1-204ENST00000479555 SEMA3EO15041 775 aa10.15□□□□□ -0.78
CMSS1-204ENST00000479555 LCE2BO14633 110 aa10.14□□□□□ -0.79
CMSS1-204ENST00000479555 ADGRG1Q9Y653 693 aa10.13□□□□□ -0.79
CMSS1-204ENST00000479555 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
CMSS1-204ENST00000479555 GFRA3O60609 400 aa10.11□□□□□ -0.79
CMSS1-204ENST00000479555 TLL1O43897 1013 aa10.1□□□□□ -0.79
CMSS1-204ENST00000479555 BLOC1S3Q6QNY0 202 aa10.1□□□□□ -0.79
CMSS1-204ENST00000479555 RCCD1A6NED2 376 aa10.09□□□□□ -0.79
CMSS1-204ENST00000479555 DNAJB2P25686 324 aa10.09□□□□□ -0.79
CMSS1-204ENST00000479555 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
CMSS1-204ENST00000479555 ZPR1O75312 459 aa10.08□□□□□ -0.8
CMSS1-204ENST00000479555 TMEM134Q9H6X4 195 aa10.08□□□□□ -0.8
CMSS1-204ENST00000479555 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms