RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-203ENST00000478909 CFTRP13569 1480 aa9.62□□□□□ -0.87
CMSS1-203ENST00000478909 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
CMSS1-203ENST00000478909 KIF21BO75037 1637 aa9.62□□□□□ -0.87
CMSS1-203ENST00000478909 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
CMSS1-203ENST00000478909 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
CMSS1-203ENST00000478909 SYNJ1O43426 1573 aa9.61□□□□□ -0.87
CMSS1-203ENST00000478909 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
CMSS1-203ENST00000478909 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
CMSS1-203ENST00000478909 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
CMSS1-203ENST00000478909 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
CMSS1-203ENST00000478909 PSEN2P49810 448 aa9.59□□□□□ -0.87
CMSS1-203ENST00000478909 FOSBP53539 338 aa9.59□□□□□ -0.87
CMSS1-203ENST00000478909 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
CMSS1-203ENST00000478909 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
CMSS1-203ENST00000478909 JPH4Q96JJ6 628 aa9.56□□□□□ -0.88
CMSS1-203ENST00000478909 DPYSL4O14531 572 aa9.55□□□□□ -0.88
CMSS1-203ENST00000478909 PTGER2P43116 358 aa9.55□□□□□ -0.88
CMSS1-203ENST00000478909 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
CMSS1-203ENST00000478909 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
CMSS1-203ENST00000478909 SOGA1O94964 1423 aa9.55□□□□□ -0.88
CMSS1-203ENST00000478909 HRCP23327 699 aa9.54□□□□□ -0.88
CMSS1-203ENST00000478909 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CMSS1-203ENST00000478909 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
CMSS1-203ENST00000478909 ADGRD1Q6QNK2 874 aa9.53□□□□□ -0.88
CMSS1-203ENST00000478909 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
CMSS1-203ENST00000478909 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
CMSS1-203ENST00000478909 CEP162Q5TB80 1403 aa9.52□□□□□ -0.89
CMSS1-203ENST00000478909 ZDHHC16Q969W1 377 aa9.52□□□□□ -0.89
CMSS1-203ENST00000478909 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
CMSS1-203ENST00000478909 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 TK2O00142 265 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 ADAM33Q9BZ11 813 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
CMSS1-203ENST00000478909 E2F4Q16254 413 aa9.5□□□□□ -0.89
CMSS1-203ENST00000478909 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
CMSS1-203ENST00000478909 HRO43593 1189 aa9.48□□□□□ -0.89
CMSS1-203ENST00000478909 PTPREP23469 700 aa9.48□□□□□ -0.89
CMSS1-203ENST00000478909 KIF27Q86VH2 1401 aa9.48□□□□□ -0.89
CMSS1-203ENST00000478909 CUX1P39880 1505 aa9.47□□□□□ -0.89
CMSS1-203ENST00000478909 PHF14O94880 888 aa9.47□□□□□ -0.89
CMSS1-203ENST00000478909 ZEB1P37275 1124 aaPredicted RBP9.47□□□□□ -0.89
CMSS1-203ENST00000478909 PDIA6Q15084 440 aa9.46□□□□□ -0.9
CMSS1-203ENST00000478909 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
CMSS1-203ENST00000478909 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
CMSS1-203ENST00000478909 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
CMSS1-203ENST00000478909 LAMC3Q9Y6N6 1575 aa9.45□□□□□ -0.9
CMSS1-203ENST00000478909 DDX12PQ92771 950 aa9.44□□□□□ -0.9
CMSS1-203ENST00000478909 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
CMSS1-203ENST00000478909 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
CMSS1-203ENST00000478909 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
CMSS1-203ENST00000478909 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
CMSS1-203ENST00000478909 RUSC2Q8N2Y8 1516 aa9.44□□□□□ -0.9
CMSS1-203ENST00000478909 EPAS1Q99814 870 aa9.43□□□□□ -0.9
CMSS1-203ENST00000478909 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
CMSS1-203ENST00000478909 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
CMSS1-203ENST00000478909 CLIP1P30622 1438 aa9.4□□□□□ -0.9
CMSS1-203ENST00000478909 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
CMSS1-203ENST00000478909 UBTFP17480 764 aaKnown RBP9.4□□□□□ -0.9
CMSS1-203ENST00000478909 COL9A1P20849 921 aa9.4□□□□□ -0.9
CMSS1-203ENST00000478909 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
CMSS1-203ENST00000478909 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
CMSS1-203ENST00000478909 PLCB2Q00722 1185 aa9.39□□□□□ -0.91
CMSS1-203ENST00000478909 FANCD2Q9BXW9 1451 aa9.39□□□□□ -0.91
CMSS1-203ENST00000478909 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
CMSS1-203ENST00000478909 NBR1Q14596 966 aa9.38□□□□□ -0.91
CMSS1-203ENST00000478909 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
CMSS1-203ENST00000478909 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
CMSS1-203ENST00000478909 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
CMSS1-203ENST00000478909 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
CMSS1-203ENST00000478909 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
CMSS1-203ENST00000478909 KCTD12Q96CX2 325 aaKnown RBP9.35□□□□□ -0.91
CMSS1-203ENST00000478909 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
CMSS1-203ENST00000478909 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
CMSS1-203ENST00000478909 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
CMSS1-203ENST00000478909 ABCA10Q8WWZ4 1543 aa9.34□□□□□ -0.91
CMSS1-203ENST00000478909 CUL7Q14999 1698 aa9.33□□□□□ -0.92
CMSS1-203ENST00000478909 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
CMSS1-203ENST00000478909 MAP3K7O43318 606 aa9.33□□□□□ -0.92
CMSS1-203ENST00000478909 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
CMSS1-203ENST00000478909 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
CMSS1-203ENST00000478909 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
CMSS1-203ENST00000478909 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
CMSS1-203ENST00000478909 HCSTQ9UBK5 93 aa9.32□□□□□ -0.92
CMSS1-203ENST00000478909 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
CMSS1-203ENST00000478909 CUX2O14529 1486 aa9.32□□□□□ -0.92
CMSS1-203ENST00000478909 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
CMSS1-203ENST00000478909 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
CMSS1-203ENST00000478909 WDR97A6NE52 1622 aa9.3□□□□□ -0.92
CMSS1-203ENST00000478909 MAP3K1Q13233 1512 aa9.3□□□□□ -0.92
CMSS1-203ENST00000478909 OSBPP22059 807 aa9.29□□□□□ -0.92
CMSS1-203ENST00000478909 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
CMSS1-203ENST00000478909 IGF1RP08069 1367 aa9.28□□□□□ -0.92
CMSS1-203ENST00000478909 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
CMSS1-203ENST00000478909 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
CMSS1-203ENST00000478909 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
CMSS1-203ENST00000478909 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
CMSS1-203ENST00000478909 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms