RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GOLGA8CPA6NN73 597 aa10.85□□□□□ -0.67
CDC42BPA-212ENST00000478573 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
CDC42BPA-212ENST00000478573 COL9A1P20849 921 aa10.84□□□□□ -0.67
CDC42BPA-212ENST00000478573 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-212ENST00000478573 EPAS1Q99814 870 aa10.84□□□□□ -0.67
CDC42BPA-212ENST00000478573 PROX2Q3B8N5 592 aa10.83□□□□□ -0.68
CDC42BPA-212ENST00000478573 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
CDC42BPA-212ENST00000478573 PTPN5P54829 565 aa10.82□□□□□ -0.68
CDC42BPA-212ENST00000478573 NBR1Q14596 966 aa10.82□□□□□ -0.68
CDC42BPA-212ENST00000478573 BHMG1C9JSJ3 638 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-212ENST00000478573 PDIA6Q15084 440 aa10.81□□□□□ -0.68
CDC42BPA-212ENST00000478573 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
CDC42BPA-212ENST00000478573 WNT2BQ93097 391 aa10.8□□□□□ -0.68
CDC42BPA-212ENST00000478573 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-212ENST00000478573 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
CDC42BPA-212ENST00000478573 MAP3K7O43318 606 aa10.78□□□□□ -0.68
CDC42BPA-212ENST00000478573 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
CDC42BPA-212ENST00000478573 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
CDC42BPA-212ENST00000478573 TSHZ2Q9NRE2 1034 aa10.76□□□□□ -0.69
CDC42BPA-212ENST00000478573 EN1Q05925 392 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-212ENST00000478573 THSD4Q6ZMP0 1018 aa10.75□□□□□ -0.69
CDC42BPA-212ENST00000478573 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-212ENST00000478573 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CDC42BPA-212ENST00000478573 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
CDC42BPA-212ENST00000478573 SEPT9Q9UHD8 586 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPA-212ENST00000478573 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
CDC42BPA-212ENST00000478573 ARIH1Q9Y4X5 557 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPA-212ENST00000478573 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-212ENST00000478573 BCAMP50895 628 aa10.67□□□□□ -0.7
CDC42BPA-212ENST00000478573 LAPTM4BQ86VI4 370 aa10.67□□□□□ -0.7
CDC42BPA-212ENST00000478573 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-212ENST00000478573 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-212ENST00000478573 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
CDC42BPA-212ENST00000478573 PACS2Q86VP3 889 aa10.64□□□□□ -0.71
CDC42BPA-212ENST00000478573 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
CDC42BPA-212ENST00000478573 OSBPP22059 807 aa10.62□□□□□ -0.71
CDC42BPA-212ENST00000478573 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-212ENST00000478573 KCNV2Q8TDN2 545 aa10.62□□□□□ -0.71
CDC42BPA-212ENST00000478573 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
CDC42BPA-212ENST00000478573 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
CDC42BPA-212ENST00000478573 SMAPO00193 183 aa10.6□□□□□ -0.71
CDC42BPA-212ENST00000478573 PRSS12P56730 875 aa10.6□□□□□ -0.71
CDC42BPA-212ENST00000478573 CERKQ8TCT0 537 aa10.6□□□□□ -0.71
CDC42BPA-212ENST00000478573 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-212ENST00000478573 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
CDC42BPA-212ENST00000478573 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-212ENST00000478573 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
CDC42BPA-212ENST00000478573 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
CDC42BPA-212ENST00000478573 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-212ENST00000478573 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
CDC42BPA-212ENST00000478573 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
CDC42BPA-212ENST00000478573 NBPF26B4DH59 902 aa10.55□□□□□ -0.72
CDC42BPA-212ENST00000478573 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
CDC42BPA-212ENST00000478573 TATDN2Q93075 761 aa10.54□□□□□ -0.72
CDC42BPA-212ENST00000478573 P3H3Q8IVL6 736 aa10.53□□□□□ -0.72
CDC42BPA-212ENST00000478573 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
CDC42BPA-212ENST00000478573 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
CDC42BPA-212ENST00000478573 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
CDC42BPA-212ENST00000478573 TSR3Q9UJK0 312 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-212ENST00000478573 RNF40O75150 1001 aa10.51□□□□□ -0.73
CDC42BPA-212ENST00000478573 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
CDC42BPA-212ENST00000478573 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
CDC42BPA-212ENST00000478573 PPP4CP60510 307 aa10.49□□□□□ -0.73
CDC42BPA-212ENST00000478573 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
CDC42BPA-212ENST00000478573 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
CDC42BPA-212ENST00000478573 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
CDC42BPA-212ENST00000478573 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-212ENST00000478573 A0A0G2JS52 829 aa10.46□□□□□ -0.73
CDC42BPA-212ENST00000478573 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
CDC42BPA-212ENST00000478573 NUTM2FA1L443 756 aa10.45□□□□□ -0.74
CDC42BPA-212ENST00000478573 SEMA3EO15041 775 aa10.45□□□□□ -0.74
CDC42BPA-212ENST00000478573 ITGBL1O95965 494 aaPredicted RBP10.45□□□□□ -0.74
CDC42BPA-212ENST00000478573 KCNC4Q03721 635 aa10.43□□□□□ -0.74
CDC42BPA-212ENST00000478573 TTC13Q8NBP0 860 aa10.42□□□□□ -0.74
CDC42BPA-212ENST00000478573 PTGDRQ13258 359 aa10.41□□□□□ -0.74
CDC42BPA-212ENST00000478573 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
CDC42BPA-212ENST00000478573 RGS20O76081 388 aa10.36□□□□□ -0.75
CDC42BPA-212ENST00000478573 SLC4A3P48751 1232 aa10.36□□□□□ -0.75
CDC42BPA-212ENST00000478573 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
CDC42BPA-212ENST00000478573 EYA1Q99502 592 aa10.36□□□□□ -0.75
CDC42BPA-212ENST00000478573 APLP1P51693 650 aa10.35□□□□□ -0.75
CDC42BPA-212ENST00000478573 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
CDC42BPA-212ENST00000478573 FCHSD2O94868 740 aa10.34□□□□□ -0.75
CDC42BPA-212ENST00000478573 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-212ENST00000478573 MTRQ99707 1265 aa10.34□□□□□ -0.75
CDC42BPA-212ENST00000478573 TJAP1Q5JTD0 557 aa10.33□□□□□ -0.76
CDC42BPA-212ENST00000478573 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
CDC42BPA-212ENST00000478573 RBM26Q5T8P6 1007 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-212ENST00000478573 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
CDC42BPA-212ENST00000478573 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-212ENST00000478573 DNAJB2P25686 324 aa10.31□□□□□ -0.76
CDC42BPA-212ENST00000478573 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
CDC42BPA-212ENST00000478573 IL21Q9HBE4 155 aa10.31□□□□□ -0.76
CDC42BPA-212ENST00000478573 COPS2P61201 443 aa10.29□□□□□ -0.76
CDC42BPA-212ENST00000478573 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
CDC42BPA-212ENST00000478573 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-212ENST00000478573 RCCD1A6NED2 376 aa10.28□□□□□ -0.76
CDC42BPA-212ENST00000478573 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
CDC42BPA-212ENST00000478573 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
CDC42BPA-212ENST00000478573 HIC1Q14526 733 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms