RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
CCNL1-220ENST00000478454 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
CCNL1-220ENST00000478454 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CCNL1-220ENST00000478454 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
CCNL1-220ENST00000478454 AXIN2Q9Y2T1 843 aa9.42□□□□□ -0.9
CCNL1-220ENST00000478454 COL9A1P20849 921 aa9.41□□□□□ -0.9
CCNL1-220ENST00000478454 POTEGQ6S5H5 508 aa9.41□□□□□ -0.9
CCNL1-220ENST00000478454 POTEMA6NI47 508 aa9.4□□□□□ -0.9
CCNL1-220ENST00000478454 PSEN2P49810 448 aa9.4□□□□□ -0.9
CCNL1-220ENST00000478454 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
CCNL1-220ENST00000478454 PTGDRQ13258 359 aa9.39□□□□□ -0.91
CCNL1-220ENST00000478454 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
CCNL1-220ENST00000478454 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
CCNL1-220ENST00000478454 PRKCSHP14314 528 aaPredicted RBP9.37□□□□□ -0.91
CCNL1-220ENST00000478454 FECHP22830 423 aa9.37□□□□□ -0.91
CCNL1-220ENST00000478454 PTPREP23469 700 aa9.37□□□□□ -0.91
CCNL1-220ENST00000478454 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
CCNL1-220ENST00000478454 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
CCNL1-220ENST00000478454 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
CCNL1-220ENST00000478454 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 ZMYND10O75800 440 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 FCHSD2O94868 740 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
CCNL1-220ENST00000478454 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
CCNL1-220ENST00000478454 PBX2P40425 430 aa9.31□□□□□ -0.92
CCNL1-220ENST00000478454 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
CCNL1-220ENST00000478454 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 GNPATO15228 680 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 PRSS12P56730 875 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 HIC1Q14526 733 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
CCNL1-220ENST00000478454 PADI6Q6TGC4 694 aa9.29□□□□□ -0.92
CCNL1-220ENST00000478454 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
CCNL1-220ENST00000478454 TTC13Q8NBP0 860 aa9.29□□□□□ -0.92
CCNL1-220ENST00000478454 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
CCNL1-220ENST00000478454 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.921e-10■■□□□ 12.6
CCNL1-220ENST00000478454 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
CCNL1-220ENST00000478454 VPS9D1Q9Y2B5 631 aa9.27□□□□□ -0.93
CCNL1-220ENST00000478454 TRIM6-TRIM34B2RNG4 842 aa9.26□□□□□ -0.93
CCNL1-220ENST00000478454 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
CCNL1-220ENST00000478454 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CCNL1-220ENST00000478454 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
CCNL1-220ENST00000478454 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
CCNL1-220ENST00000478454 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
CCNL1-220ENST00000478454 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
CCNL1-220ENST00000478454 ADGRD1Q6QNK2 874 aa9.23□□□□□ -0.93
CCNL1-220ENST00000478454 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
CCNL1-220ENST00000478454 TK2O00142 265 aa9.22□□□□□ -0.93
CCNL1-220ENST00000478454 IRF6O14896 467 aa9.22□□□□□ -0.93
CCNL1-220ENST00000478454 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
CCNL1-220ENST00000478454 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
CCNL1-220ENST00000478454 SMAPO00193 183 aa9.21□□□□□ -0.94
CCNL1-220ENST00000478454 HRO43593 1189 aa9.21□□□□□ -0.94
CCNL1-220ENST00000478454 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
CCNL1-220ENST00000478454 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.94
CCNL1-220ENST00000478454 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
CCNL1-220ENST00000478454 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
CCNL1-220ENST00000478454 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
CCNL1-220ENST00000478454 CCDC102AQ96A19 550 aa9.2□□□□□ -0.94
CCNL1-220ENST00000478454 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
CCNL1-220ENST00000478454 TATDN2Q93075 761 aa9.19□□□□□ -0.94
CCNL1-220ENST00000478454 EYA1Q99502 592 aa9.19□□□□□ -0.94
CCNL1-220ENST00000478454 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
CCNL1-220ENST00000478454 SEPT9Q9UHD8 586 aaPredicted RBP9.18□□□□□ -0.94
CCNL1-220ENST00000478454 METTL3Q86U44 580 aaKnown RBP9.17□□□□□ -0.94
CCNL1-220ENST00000478454 NLRP7Q8WX94 980 aa9.17□□□□□ -0.94
CCNL1-220ENST00000478454 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
CCNL1-220ENST00000478454 PXYLP1Q8TE99 480 aa9.16□□□□□ -0.94
CCNL1-220ENST00000478454 AK7Q96M32 723 aa9.15□□□□□ -0.94
CCNL1-220ENST00000478454 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
CCNL1-220ENST00000478454 TRIM66O15016 1216 aa9.14□□□□□ -0.95
CCNL1-220ENST00000478454 OATP04181 439 aa9.13□□□□□ -0.95
CCNL1-220ENST00000478454 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
CCNL1-220ENST00000478454 PCDH10Q9P2E7 1040 aa9.12□□□□□ -0.95
CCNL1-220ENST00000478454 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
CCNL1-220ENST00000478454 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
CCNL1-220ENST00000478454 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
CCNL1-220ENST00000478454 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
CCNL1-220ENST00000478454 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
CCNL1-220ENST00000478454 AMHR2Q16671 573 aa9.09□□□□□ -0.95
CCNL1-220ENST00000478454 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
CCNL1-220ENST00000478454 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
CCNL1-220ENST00000478454 PDE4DQ08499 809 aa9.08□□□□□ -0.96
CCNL1-220ENST00000478454 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
CCNL1-220ENST00000478454 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
CCNL1-220ENST00000478454 MDM2Q00987 491 aaPredicted RBP9.07□□□□□ -0.96
CCNL1-220ENST00000478454 TMUB1Q9BVT8 246 aa9.07□□□□□ -0.96
CCNL1-220ENST00000478454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
CCNL1-220ENST00000478454 DNAJB2P25686 324 aa9.06□□□□□ -0.96
CCNL1-220ENST00000478454 SAMD7Q7Z3H4 446 aa9.06□□□□□ -0.96
CCNL1-220ENST00000478454 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
CCNL1-220ENST00000478454 PARP9Q8IXQ6 854 aa9.05□□□□□ -0.96
CCNL1-220ENST00000478454 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
CCNL1-220ENST00000478454 STAC3Q96MF2 364 aa9.04□□□□□ -0.96
CCNL1-220ENST00000478454 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
CCNL1-220ENST00000478454 BCAMP50895 628 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms