RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
COL27A1-204ENST00000477421 TROQ12816 1431 aaPredicted RBP14.34□□□□□ -0.11
COL27A1-204ENST00000477421 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
COL27A1-204ENST00000477421 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
COL27A1-204ENST00000477421 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL27A1-204ENST00000477421 HOMEZQ8IX15 550 aa14.34□□□□□ -0.11
COL27A1-204ENST00000477421 ZBTB7CA1YPR0 619 aa14.33□□□□□ -0.12
COL27A1-204ENST00000477421 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
COL27A1-204ENST00000477421 MAPK8IP3Q9UPT6 1336 aa14.33□□□□□ -0.12
COL27A1-204ENST00000477421 TPRNQ4KMQ1 711 aa14.33□□□□□ -0.12
COL27A1-204ENST00000477421 CDCA7LQ96GN5 454 aa14.32□□□□□ -0.12
COL27A1-204ENST00000477421 CLUAP1Q96AJ1 413 aa14.32□□□□□ -0.12
COL27A1-204ENST00000477421 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
COL27A1-204ENST00000477421 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
COL27A1-204ENST00000477421 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
COL27A1-204ENST00000477421 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
COL27A1-204ENST00000477421 ABCC5O15440 1437 aa14.3□□□□□ -0.12
COL27A1-204ENST00000477421 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
COL27A1-204ENST00000477421 APAF1O14727 1248 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 BCL2L13Q9BXK5 485 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 IQGAP2Q13576 1575 aa14.29□□□□□ -0.12
COL27A1-204ENST00000477421 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
COL27A1-204ENST00000477421 KIAA1107Q9UPP5 1409 aa14.28□□□□□ -0.12
COL27A1-204ENST00000477421 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.12
COL27A1-204ENST00000477421 CFAP70Q5T0N1 1121 aa14.27□□□□□ -0.12
COL27A1-204ENST00000477421 TMEM132EQ6IEE7 984 aa14.27□□□□□ -0.12
COL27A1-204ENST00000477421 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
COL27A1-204ENST00000477421 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
COL27A1-204ENST00000477421 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
COL27A1-204ENST00000477421 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
COL27A1-204ENST00000477421 AKNAQ7Z591 1439 aa14.25□□□□□ -0.13
COL27A1-204ENST00000477421 NUTM2FA1L443 756 aa14.25□□□□□ -0.13
COL27A1-204ENST00000477421 PNISRQ8TF01 805 aaKnown RBP14.25□□□□□ -0.13
COL27A1-204ENST00000477421 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
COL27A1-204ENST00000477421 ADAMTS8Q9UP79 889 aa14.25□□□□□ -0.13
COL27A1-204ENST00000477421 CUL7Q14999 1698 aa14.24□□□□□ -0.13
COL27A1-204ENST00000477421 PDE3BQ13370 1112 aa14.24□□□□□ -0.13
COL27A1-204ENST00000477421 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
COL27A1-204ENST00000477421 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
COL27A1-204ENST00000477421 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
COL27A1-204ENST00000477421 ARHGAP5Q13017 1502 aa14.22□□□□□ -0.13
COL27A1-204ENST00000477421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL27A1-204ENST00000477421 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
COL27A1-204ENST00000477421 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
COL27A1-204ENST00000477421 SLC4A3P48751 1232 aa14.21□□□□□ -0.14
COL27A1-204ENST00000477421 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
COL27A1-204ENST00000477421 TCERG1O14776 1098 aaKnown RBP14.2□□□□□ -0.14
COL27A1-204ENST00000477421 DEKP35659 375 aaKnown RBP14.2□□□□□ -0.14
COL27A1-204ENST00000477421 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
COL27A1-204ENST00000477421 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
COL27A1-204ENST00000477421 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
COL27A1-204ENST00000477421 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
COL27A1-204ENST00000477421 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
COL27A1-204ENST00000477421 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
COL27A1-204ENST00000477421 PDE4AP27815 886 aa14.17□□□□□ -0.14
COL27A1-204ENST00000477421 LMOD2Q6P5Q4 547 aa14.17□□□□□ -0.14
COL27A1-204ENST00000477421 COG6Q9Y2V7 657 aa14.17□□□□□ -0.14
COL27A1-204ENST00000477421 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
COL27A1-204ENST00000477421 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-204ENST00000477421 BECN1Q14457 450 aa14.16□□□□□ -0.14
COL27A1-204ENST00000477421 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-204ENST00000477421 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-204ENST00000477421 SCAPERQ9BY12 1400 aa14.15□□□□□ -0.14
COL27A1-204ENST00000477421 MAGI1Q96QZ7 1491 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-204ENST00000477421 APBB1O00213 710 aa14.15□□□□□ -0.15
COL27A1-204ENST00000477421 ITPRIPQ8IWB1 547 aa14.15□□□□□ -0.15
COL27A1-204ENST00000477421 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-204ENST00000477421 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
COL27A1-204ENST00000477421 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
COL27A1-204ENST00000477421 BRD4O60885 1362 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-204ENST00000477421 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
COL27A1-204ENST00000477421 SKAP1Q86WV1 359 aa14.13□□□□□ -0.15
COL27A1-204ENST00000477421 RPRD2Q5VT52 1461 aaKnown RBP14.13□□□□□ -0.15
COL27A1-204ENST00000477421 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
COL27A1-204ENST00000477421 RAPGEF3O95398 923 aa14.12□□□□□ -0.15
COL27A1-204ENST00000477421 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
COL27A1-204ENST00000477421 GGNBP2Q9H3C7 697 aa14.11□□□□□ -0.15
COL27A1-204ENST00000477421 NUP153P49790 1475 aaKnown RBP14.11□□□□□ -0.15
COL27A1-204ENST00000477421 GPATCH8Q9UKJ3 1502 aaKnown RBP14.11□□□□□ -0.15
COL27A1-204ENST00000477421 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
COL27A1-204ENST00000477421 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
COL27A1-204ENST00000477421 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
COL27A1-204ENST00000477421 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
COL27A1-204ENST00000477421 MTHFSP49914 203 aa14.09□□□□□ -0.15
COL27A1-204ENST00000477421 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.15
COL27A1-204ENST00000477421 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
COL27A1-204ENST00000477421 E9PSI1 815 aa14.07□□□□□ -0.16
COL27A1-204ENST00000477421 EVC2Q86UK5 1308 aa14.07□□□□□ -0.16
COL27A1-204ENST00000477421 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-204ENST00000477421 BCAR3O75815 825 aa14.06□□□□□ -0.16
COL27A1-204ENST00000477421 PLEKHH2Q8IVE3 1493 aa14.05□□□□□ -0.16
COL27A1-204ENST00000477421 FAM69CQ0P6D2 419 aa14.05□□□□□ -0.16
COL27A1-204ENST00000477421 MS4A1P11836 297 aa14.04□□□□□ -0.16
COL27A1-204ENST00000477421 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
COL27A1-204ENST00000477421 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
COL27A1-204ENST00000477421 ATP10BO94823 1461 aa14.04□□□□□ -0.16
COL27A1-204ENST00000477421 CENPQQ7L2Z9 268 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms