RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
PGK1-204ENST00000477335 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
PGK1-204ENST00000477335 A2MP01023 1474 aa13.92□□□□□ -0.18
PGK1-204ENST00000477335 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
PGK1-204ENST00000477335 DHX29Q7Z478 1369 aaKnown RBP13.91□□□□□ -0.18
PGK1-204ENST00000477335 ERBINQ96RT1 1412 aa13.9□□□□□ -0.18
PGK1-204ENST00000477335 ATP10AO60312 1499 aa13.89□□□□□ -0.19
PGK1-204ENST00000477335 MROH1Q8NDA8 1641 aa13.87□□□□□ -0.19
PGK1-204ENST00000477335 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
PGK1-204ENST00000477335 HRCP23327 699 aa13.86□□□□□ -0.19
PGK1-204ENST00000477335 UNC13BO14795 1591 aa13.86□□□□□ -0.19
PGK1-204ENST00000477335 EIF2AK4Q9P2K8 1649 aaKnown RBP13.86□□□□□ -0.19
PGK1-204ENST00000477335 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
PGK1-204ENST00000477335 PZPP20742 1482 aa13.85□□□□□ -0.19
PGK1-204ENST00000477335 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
PGK1-204ENST00000477335 DEPDC5O75140 1603 aa13.84□□□□□ -0.19
PGK1-204ENST00000477335 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
PGK1-204ENST00000477335 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
PGK1-204ENST00000477335 RNF17Q9BXT8 1623 aaKnown RBP13.83□□□□□ -0.2
PGK1-204ENST00000477335 KIF3BO15066 747 aa13.83□□□□□ -0.2
PGK1-204ENST00000477335 AGLP35573 1532 aa13.83□□□□□ -0.2
PGK1-204ENST00000477335 VWDEQ8N2E2 1590 aa13.82□□□□□ -0.2
PGK1-204ENST00000477335 PRDM15P57071 1507 aaPredicted RBP13.81□□□□□ -0.2
PGK1-204ENST00000477335 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
PGK1-204ENST00000477335 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
PGK1-204ENST00000477335 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
PGK1-204ENST00000477335 NUP155O75694 1391 aa13.8□□□□□ -0.2
PGK1-204ENST00000477335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■□□□□ 9.9
PGK1-204ENST00000477335 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
PGK1-204ENST00000477335 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
PGK1-204ENST00000477335 GGT6Q6P531 493 aa13.76□□□□□ -0.21
PGK1-204ENST00000477335 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
PGK1-204ENST00000477335 ABCC3O15438 1527 aa13.75□□□□□ -0.21
PGK1-204ENST00000477335 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
PGK1-204ENST00000477335 CEP152O94986 1710 aa13.74□□□□□ -0.21
PGK1-204ENST00000477335 MLECQ14165 292 aa13.73□□□□□ -0.21
PGK1-204ENST00000477335 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
PGK1-204ENST00000477335 PKD2Q13563 968 aa13.72□□□□□ -0.21
PGK1-204ENST00000477335 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
PGK1-204ENST00000477335 CCER1Q8TC90 406 aaPredicted RBP13.71□□□□□ -0.21
PGK1-204ENST00000477335 E9PCH4 1651 aa13.71□□□□□ -0.21
PGK1-204ENST00000477335 TET3O43151 1660 aa13.71□□□□□ -0.21
PGK1-204ENST00000477335 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
PGK1-204ENST00000477335 KANK1Q14678 1352 aa13.7□□□□□ -0.22
PGK1-204ENST00000477335 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
PGK1-204ENST00000477335 PLA2R1Q13018 1463 aa13.69□□□□□ -0.22
PGK1-204ENST00000477335 CAMSAP1Q5T5Y3 1602 aa13.69□□□□□ -0.22
PGK1-204ENST00000477335 ANKRD30BQ9BXX2 1392 aa13.69□□□□□ -0.22
PGK1-204ENST00000477335 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
PGK1-204ENST00000477335 ZC3H13Q5T200 1668 aaKnown RBP13.69□□□□□ -0.22
PGK1-204ENST00000477335 NPATQ14207 1427 aa13.68□□□□□ -0.22
PGK1-204ENST00000477335 WASHC2CQ9Y4E1 1318 aa13.67□□□□□ -0.22
PGK1-204ENST00000477335 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
PGK1-204ENST00000477335 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
PGK1-204ENST00000477335 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
PGK1-204ENST00000477335 PTPRTO14522 1441 aa13.64□□□□□ -0.23
PGK1-204ENST00000477335 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
PGK1-204ENST00000477335 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
PGK1-204ENST00000477335 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
PGK1-204ENST00000477335 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
PGK1-204ENST00000477335 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
PGK1-204ENST00000477335 NOS1P29475 1434 aa13.62□□□□□ -0.23
PGK1-204ENST00000477335 SYNMO15061 1565 aa13.62□□□□□ -0.23
PGK1-204ENST00000477335 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
PGK1-204ENST00000477335 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
PGK1-204ENST00000477335 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
PGK1-204ENST00000477335 TRPM2O94759 1503 aa13.61□□□□□ -0.23
PGK1-204ENST00000477335 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
PGK1-204ENST00000477335 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
PGK1-204ENST00000477335 ERVK-7P63135 1459 aa13.61□□□□□ -0.23
PGK1-204ENST00000477335 MROH2AA6NES4 1674 aa13.6□□□□□ -0.23
PGK1-204ENST00000477335 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
PGK1-204ENST00000477335 CLTCL1P53675 1640 aa13.6□□□□□ -0.23
PGK1-204ENST00000477335 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
PGK1-204ENST00000477335 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
PGK1-204ENST00000477335 C3P01024 1663 aa13.59□□□□□ -0.23
PGK1-204ENST00000477335 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
PGK1-204ENST00000477335 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.24
PGK1-204ENST00000477335 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
PGK1-204ENST00000477335 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
PGK1-204ENST00000477335 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
PGK1-204ENST00000477335 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
PGK1-204ENST00000477335 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
PGK1-204ENST00000477335 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
PGK1-204ENST00000477335 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
PGK1-204ENST00000477335 PTPRMP28827 1452 aa13.52□□□□□ -0.25
PGK1-204ENST00000477335 ADGRB3O60242 1522 aa13.51□□□□□ -0.25
PGK1-204ENST00000477335 TNRQ92752 1358 aa13.51□□□□□ -0.25
PGK1-204ENST00000477335 IDI1Q13907 227 aa13.51□□□□□ -0.25
PGK1-204ENST00000477335 L3MBTL2Q969R5 705 aa13.48□□□□□ -0.25
PGK1-204ENST00000477335 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
PGK1-204ENST00000477335 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
PGK1-204ENST00000477335 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.26
PGK1-204ENST00000477335 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
PGK1-204ENST00000477335 A2ML1A8K2U0 1454 aa13.45□□□□□ -0.26
PGK1-204ENST00000477335 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
PGK1-204ENST00000477335 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
PGK1-204ENST00000477335 MYO5BQ9ULV0 1848 aa13.45□□□□□ -0.26
PGK1-204ENST00000477335 KIF1BO60333 1816 aa13.44□□□□□ -0.26
PGK1-204ENST00000477335 NLRP1Q9C000 1473 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms