RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
COPS6-208ENST00000474823 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
COPS6-208ENST00000474823 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
COPS6-208ENST00000474823 ANKRD50Q9ULJ7 1429 aa15.88■□□□□ 0.13
COPS6-208ENST00000474823 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
COPS6-208ENST00000474823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■□□□□ 9.9
COPS6-208ENST00000474823 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
COPS6-208ENST00000474823 KANK1Q14678 1352 aa15.84■□□□□ 0.13
COPS6-208ENST00000474823 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
COPS6-208ENST00000474823 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
COPS6-208ENST00000474823 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
COPS6-208ENST00000474823 KDM5DQ9BY66 1539 aa15.83■□□□□ 0.12
COPS6-208ENST00000474823 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
COPS6-208ENST00000474823 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
COPS6-208ENST00000474823 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
COPS6-208ENST00000474823 PRDM15P57071 1507 aaPredicted RBP15.79■□□□□ 0.12
COPS6-208ENST00000474823 NAIPQ13075 1403 aa15.79■□□□□ 0.12
COPS6-208ENST00000474823 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
COPS6-208ENST00000474823 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
COPS6-208ENST00000474823 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
COPS6-208ENST00000474823 ABCC3O15438 1527 aa15.78■□□□□ 0.12
COPS6-208ENST00000474823 C3P01024 1663 aa15.77■□□□□ 0.12
COPS6-208ENST00000474823 GCC2Q8IWJ2 1684 aa15.76■□□□□ 0.11
COPS6-208ENST00000474823 NUP155O75694 1391 aa15.75■□□□□ 0.11
COPS6-208ENST00000474823 NPATQ14207 1427 aa15.74■□□□□ 0.11
COPS6-208ENST00000474823 UNC13BO14795 1591 aa15.74■□□□□ 0.11
COPS6-208ENST00000474823 CEP152O94986 1710 aa15.74■□□□□ 0.11
COPS6-208ENST00000474823 PZPP20742 1482 aa15.73■□□□□ 0.11
COPS6-208ENST00000474823 VWDEQ8N2E2 1590 aa15.73■□□□□ 0.11
COPS6-208ENST00000474823 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
COPS6-208ENST00000474823 SETD1BQ9UPS6 1966 aaKnown RBP15.72■□□□□ 0.11
COPS6-208ENST00000474823 LMTK2Q8IWU2 1503 aa15.72■□□□□ 0.11
COPS6-208ENST00000474823 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
COPS6-208ENST00000474823 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
COPS6-208ENST00000474823 ARHGAP31Q2M1Z3 1444 aa15.7■□□□□ 0.1
COPS6-208ENST00000474823 UHRF1BP1Q6BDS2 1440 aa15.7■□□□□ 0.1
COPS6-208ENST00000474823 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
COPS6-208ENST00000474823 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
COPS6-208ENST00000474823 TNRQ92752 1358 aa15.69■□□□□ 0.1
COPS6-208ENST00000474823 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
COPS6-208ENST00000474823 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
COPS6-208ENST00000474823 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
COPS6-208ENST00000474823 EFCAB6Q5THR3 1501 aa15.67■□□□□ 0.1
COPS6-208ENST00000474823 TET3O43151 1660 aa15.67■□□□□ 0.1
COPS6-208ENST00000474823 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
COPS6-208ENST00000474823 RPRD2Q5VT52 1461 aaKnown RBP15.65■□□□□ 0.1
COPS6-208ENST00000474823 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
COPS6-208ENST00000474823 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
COPS6-208ENST00000474823 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
COPS6-208ENST00000474823 SPATA31D1Q6ZQQ2 1576 aa15.64■□□□□ 0.09
COPS6-208ENST00000474823 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
COPS6-208ENST00000474823 MYO3AQ8NEV4 1616 aa15.62■□□□□ 0.09
COPS6-208ENST00000474823 NLRP1Q9C000 1473 aa15.62■□□□□ 0.09
COPS6-208ENST00000474823 HSPA2P54652 639 aa15.61■□□□□ 0.09
COPS6-208ENST00000474823 A2ML1A8K2U0 1454 aa15.6■□□□□ 0.09
COPS6-208ENST00000474823 HRCP23327 699 aa15.6■□□□□ 0.09
COPS6-208ENST00000474823 PKD2Q13563 968 aa15.6■□□□□ 0.09
COPS6-208ENST00000474823 E9PCH4 1651 aa15.6■□□□□ 0.09
COPS6-208ENST00000474823 NOS1P29475 1434 aa15.6■□□□□ 0.09
COPS6-208ENST00000474823 CEP170BQ9Y4F5 1589 aaPredicted RBP15.59■□□□□ 0.09
COPS6-208ENST00000474823 SLC52A1Q9NWF4 448 aa15.59■□□□□ 0.09
COPS6-208ENST00000474823 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
COPS6-208ENST00000474823 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
COPS6-208ENST00000474823 ZNF142P52746 1687 aaPredicted RBP15.57■□□□□ 0.08
COPS6-208ENST00000474823 THEMISQ8N1K5 641 aaPredicted RBP15.57■□□□□ 0.08
COPS6-208ENST00000474823 IDI1Q13907 227 aa15.56■□□□□ 0.08
COPS6-208ENST00000474823 UGGT1Q9NYU2 1555 aa15.56■□□□□ 0.08
COPS6-208ENST00000474823 SYNMO15061 1565 aa15.54■□□□□ 0.08
COPS6-208ENST00000474823 PTPRTO14522 1441 aa15.52■□□□□ 0.08
COPS6-208ENST00000474823 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
COPS6-208ENST00000474823 SPHKAPQ2M3C7 1700 aa15.51■□□□□ 0.07
COPS6-208ENST00000474823 FOXD1Q16676 465 aa15.51■□□□□ 0.07
COPS6-208ENST00000474823 PLA2R1Q13018 1463 aa15.51■□□□□ 0.07
COPS6-208ENST00000474823 PIK3C2BO00750 1634 aa15.5■□□□□ 0.07
COPS6-208ENST00000474823 ANKLE2Q86XL3 938 aa15.5■□□□□ 0.07
COPS6-208ENST00000474823 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
COPS6-208ENST00000474823 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
COPS6-208ENST00000474823 TRPM2O94759 1503 aa15.48■□□□□ 0.07
COPS6-208ENST00000474823 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
COPS6-208ENST00000474823 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
COPS6-208ENST00000474823 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
COPS6-208ENST00000474823 KDM5AP29375 1690 aaKnown RBP15.47■□□□□ 0.07
COPS6-208ENST00000474823 HDGFP51858 240 aaKnown RBP15.46■□□□□ 0.07
COPS6-208ENST00000474823 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
COPS6-208ENST00000474823 TMEM2Q9UHN6 1383 aa15.46■□□□□ 0.07
COPS6-208ENST00000474823 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
COPS6-208ENST00000474823 TXNDC2Q86VQ3 553 aa15.45■□□□□ 0.06
COPS6-208ENST00000474823 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
COPS6-208ENST00000474823 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
COPS6-208ENST00000474823 SLIT1O75093 1534 aa15.43■□□□□ 0.06
COPS6-208ENST00000474823 CLTCL1P53675 1640 aa15.43■□□□□ 0.06
COPS6-208ENST00000474823 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
COPS6-208ENST00000474823 ARHGAP23Q9P227 1491 aa15.42■□□□□ 0.06
COPS6-208ENST00000474823 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
COPS6-208ENST00000474823 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.42■□□□□ 0.06
COPS6-208ENST00000474823 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
COPS6-208ENST00000474823 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
COPS6-208ENST00000474823 LTKP29376 864 aa15.41■□□□□ 0.06
COPS6-208ENST00000474823 KIF1BO60333 1816 aa15.4■□□□□ 0.06
COPS6-208ENST00000474823 NPHP4O75161 1426 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms