RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 E2F4Q16254 413 aa11.12□□□□□ -0.63
GPCPD1-204ENST00000473797 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
GPCPD1-204ENST00000473797 COL9A1P20849 921 aa11.1□□□□□ -0.63
GPCPD1-204ENST00000473797 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
GPCPD1-204ENST00000473797 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
GPCPD1-204ENST00000473797 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
GPCPD1-204ENST00000473797 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
GPCPD1-204ENST00000473797 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
GPCPD1-204ENST00000473797 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
GPCPD1-204ENST00000473797 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
GPCPD1-204ENST00000473797 DDX12PQ92771 950 aa11.05□□□□□ -0.64
GPCPD1-204ENST00000473797 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
GPCPD1-204ENST00000473797 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
GPCPD1-204ENST00000473797 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
GPCPD1-204ENST00000473797 LAPTM4BQ86VI4 370 aa11.02□□□□□ -0.65
GPCPD1-204ENST00000473797 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
GPCPD1-204ENST00000473797 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
GPCPD1-204ENST00000473797 WNT2BQ93097 391 aa11□□□□□ -0.65
GPCPD1-204ENST00000473797 NBR1Q14596 966 aa10.99□□□□□ -0.65
GPCPD1-204ENST00000473797 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
GPCPD1-204ENST00000473797 KIAA1468Q9P260 1216 aa10.99□□□□□ -0.65
GPCPD1-204ENST00000473797 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
GPCPD1-204ENST00000473797 PTPN5P54829 565 aa10.97□□□□□ -0.65
GPCPD1-204ENST00000473797 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
GPCPD1-204ENST00000473797 MAP3K7O43318 606 aa10.95□□□□□ -0.66
GPCPD1-204ENST00000473797 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
GPCPD1-204ENST00000473797 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
GPCPD1-204ENST00000473797 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
GPCPD1-204ENST00000473797 OSBPP22059 807 aa10.93□□□□□ -0.66
GPCPD1-204ENST00000473797 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
GPCPD1-204ENST00000473797 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
GPCPD1-204ENST00000473797 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
GPCPD1-204ENST00000473797 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
GPCPD1-204ENST00000473797 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
GPCPD1-204ENST00000473797 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
GPCPD1-204ENST00000473797 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
GPCPD1-204ENST00000473797 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
GPCPD1-204ENST00000473797 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
GPCPD1-204ENST00000473797 PRSS12P56730 875 aa10.88□□□□□ -0.67
GPCPD1-204ENST00000473797 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
GPCPD1-204ENST00000473797 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
GPCPD1-204ENST00000473797 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
GPCPD1-204ENST00000473797 BCAMP50895 628 aa10.85□□□□□ -0.67
GPCPD1-204ENST00000473797 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
GPCPD1-204ENST00000473797 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
GPCPD1-204ENST00000473797 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
GPCPD1-204ENST00000473797 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
GPCPD1-204ENST00000473797 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-204ENST00000473797 TTC13Q8NBP0 860 aa10.81□□□□□ -0.68
GPCPD1-204ENST00000473797 CDHR5Q9HBB8 845 aa10.81□□□□□ -0.68
GPCPD1-204ENST00000473797 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-204ENST00000473797 TATDN2Q93075 761 aa10.8□□□□□ -0.68
GPCPD1-204ENST00000473797 WBP1LQ9NX94 342 aa10.8□□□□□ -0.68
GPCPD1-204ENST00000473797 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
GPCPD1-204ENST00000473797 RGS20O76081 388 aa10.79□□□□□ -0.68
GPCPD1-204ENST00000473797 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
GPCPD1-204ENST00000473797 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
GPCPD1-204ENST00000473797 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
GPCPD1-204ENST00000473797 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
GPCPD1-204ENST00000473797 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
GPCPD1-204ENST00000473797 A0A0G2JS52 829 aa10.76□□□□□ -0.69
GPCPD1-204ENST00000473797 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
GPCPD1-204ENST00000473797 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
GPCPD1-204ENST00000473797 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
GPCPD1-204ENST00000473797 SMAPO00193 183 aa10.74□□□□□ -0.69
GPCPD1-204ENST00000473797 SAMD7Q7Z3H4 446 aa10.73□□□□□ -0.69
GPCPD1-204ENST00000473797 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
GPCPD1-204ENST00000473797 PPP4CP60510 307 aa10.71□□□□□ -0.69
GPCPD1-204ENST00000473797 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
GPCPD1-204ENST00000473797 PTGDRQ13258 359 aa10.69□□□□□ -0.7
GPCPD1-204ENST00000473797 KCNC4Q03721 635 aa10.68□□□□□ -0.7
GPCPD1-204ENST00000473797 EYA1Q99502 592 aa10.68□□□□□ -0.7
GPCPD1-204ENST00000473797 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
GPCPD1-204ENST00000473797 SEMA3EO15041 775 aa10.65□□□□□ -0.7
GPCPD1-204ENST00000473797 TJAP1Q5JTD0 557 aa10.63□□□□□ -0.71
GPCPD1-204ENST00000473797 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
GPCPD1-204ENST00000473797 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
GPCPD1-204ENST00000473797 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
GPCPD1-204ENST00000473797 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
GPCPD1-204ENST00000473797 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
GPCPD1-204ENST00000473797 ADGRG1Q9Y653 693 aa10.59□□□□□ -0.71
GPCPD1-204ENST00000473797 APLP1P51693 650 aa10.58□□□□□ -0.72
GPCPD1-204ENST00000473797 FCHSD2O94868 740 aa10.57□□□□□ -0.72
GPCPD1-204ENST00000473797 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
GPCPD1-204ENST00000473797 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
GPCPD1-204ENST00000473797 DNAJB2P25686 324 aa10.56□□□□□ -0.72
GPCPD1-204ENST00000473797 MTRQ99707 1265 aa10.56□□□□□ -0.72
GPCPD1-204ENST00000473797 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
GPCPD1-204ENST00000473797 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
GPCPD1-204ENST00000473797 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
GPCPD1-204ENST00000473797 HIC1Q14526 733 aa10.53□□□□□ -0.72
GPCPD1-204ENST00000473797 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
GPCPD1-204ENST00000473797 RNF40O75150 1001 aa10.52□□□□□ -0.73
GPCPD1-204ENST00000473797 HAP1P54257 671 aaPredicted RBP10.52□□□□□ -0.73
GPCPD1-204ENST00000473797 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
GPCPD1-204ENST00000473797 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
GPCPD1-204ENST00000473797 OATP04181 439 aa10.5□□□□□ -0.73
GPCPD1-204ENST00000473797 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
GPCPD1-204ENST00000473797 ZNF516Q92618 1163 aa10.5□□□□□ -0.73
GPCPD1-204ENST00000473797 IRX2Q9BZI1 471 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 1254.1 ms