RNA–Protein interactions for RNA: ENST00000473176.1

TOX4-208, Transcript of TOX high mobility group box family member 4, human

TSL 2

Gene TOX4, Length 704 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOX4-208	ENST00000473176	ERBIN	Q96RT1	1412 aa		13.92	□□□□□ -0.18
TOX4-208	ENST00000473176	RAB3GAP2	Q9H2M9	1393 aa		13.91	□□□□□ -0.18
TOX4-208	ENST00000473176	HRC	P23327	699 aa		13.9	□□□□□ -0.18
TOX4-208	ENST00000473176	SIGLEC1	Q9BZZ2	1709 aa		13.9	□□□□□ -0.18
TOX4-208	ENST00000473176	KIF3B	O15066	747 aa		13.89	□□□□□ -0.19
TOX4-208	ENST00000473176	MSH5	O43196	834 aa		13.89	□□□□□ -0.19
TOX4-208	ENST00000473176	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.89	□□□□□ -0.19
TOX4-208	ENST00000473176	AGL	P35573	1532 aa		13.89	□□□□□ -0.19
TOX4-208	ENST00000473176	BCORL1	Q5H9F3	1711 aa		13.87	□□□□□ -0.19
TOX4-208	ENST00000473176	RNF17	Q9BXT8	1623 aa	Known RBP	13.84	□□□□□ -0.19
TOX4-208	ENST00000473176	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.84	□□□□□ -0.19
TOX4-208	ENST00000473176	ACIN1	Q9UKV3	1341 aa	Known RBP	13.84	□□□□□ -0.19
TOX4-208	ENST00000473176	UNC13B	O14795	1591 aa		13.83	□□□□□ -0.19
TOX4-208	ENST00000473176	DEPDC5	O75140	1603 aa		13.83	□□□□□ -0.2
TOX4-208	ENST00000473176	MROH1	Q8NDA8	1641 aa		13.83	□□□□□ -0.2
TOX4-208	ENST00000473176	GGT6	Q6P531	493 aa		13.83	□□□□□ -0.2
TOX4-208	ENST00000473176	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	6e-9	■□□□□ 9.2
TOX4-208	ENST00000473176	TRIM52	Q96A61	297 aa		13.82	□□□□□ -0.2
TOX4-208	ENST00000473176	NUP155	O75694	1391 aa		13.82	□□□□□ -0.2
TOX4-208	ENST00000473176	MLEC	Q14165	292 aa		13.81	□□□□□ -0.2
TOX4-208	ENST00000473176	PRDM15	P57071	1507 aa	Predicted RBP	13.8	□□□□□ -0.2
TOX4-208	ENST00000473176	VWDE	Q8N2E2	1590 aa		13.8	□□□□□ -0.2
TOX4-208	ENST00000473176	KDM5D	Q9BY66	1539 aa		13.8	□□□□□ -0.2
TOX4-208	ENST00000473176	KANK1	Q14678	1352 aa		13.79	□□□□□ -0.2
TOX4-208	ENST00000473176	PZP	P20742	1482 aa		13.79	□□□□□ -0.2
TOX4-208	ENST00000473176	IQGAP3	Q86VI3	1631 aa		13.78	□□□□□ -0.2
TOX4-208	ENST00000473176	FAM135A	Q9P2D6	1515 aa		13.77	□□□□□ -0.21
TOX4-208	ENST00000473176	WASHC2C	Q9Y4E1	1318 aa		13.76	□□□□□ -0.21
TOX4-208	ENST00000473176	MPHOSPH9	Q99550	1183 aa		13.76	□□□□□ -0.21
TOX4-208	ENST00000473176	ABCC3	O15438	1527 aa		13.75	□□□□□ -0.21
TOX4-208	ENST00000473176	LMTK2	Q8IWU2	1503 aa		13.75	□□□□□ -0.21
TOX4-208	ENST00000473176	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.75	□□□□□ -0.21
TOX4-208	ENST00000473176	CEP152	O94986	1710 aa		13.74	□□□□□ -0.21
TOX4-208	ENST00000473176	DHX57	Q6P158	1386 aa	Known RBP	13.73	□□□□□ -0.21
TOX4-208	ENST00000473176	ADAMTSL3	P82987	1691 aa		13.73	□□□□□ -0.21
TOX4-208	ENST00000473176	ZC3H13	Q5T200	1668 aa	Known RBP	13.73	□□□□□ -0.21
TOX4-208	ENST00000473176	TET3	O43151	1660 aa		13.72	□□□□□ -0.21
TOX4-208	ENST00000473176	PKD2	Q13563	968 aa		13.72	□□□□□ -0.21
TOX4-208	ENST00000473176	ESF1	Q9H501	851 aa	Known RBP	13.72	□□□□□ -0.21
TOX4-208	ENST00000473176	CLTC	Q00610	1675 aa	Known RBP	13.72	□□□□□ -0.21
TOX4-208	ENST00000473176	CNTLN	Q9NXG0	1405 aa		13.71	□□□□□ -0.22
TOX4-208	ENST00000473176	CAMSAP1	Q5T5Y3	1602 aa		13.71	□□□□□ -0.22
TOX4-208	ENST00000473176	EFCAB6	Q5THR3	1501 aa		13.7	□□□□□ -0.22
TOX4-208	ENST00000473176	MADD	Q8WXG6	1647 aa		13.7	□□□□□ -0.22
TOX4-208	ENST00000473176	ARHGAP31	Q2M1Z3	1444 aa		13.7	□□□□□ -0.22
TOX4-208	ENST00000473176	FER1L4	A9Z1Z3	1794 aa		13.7	□□□□□ -0.22
TOX4-208	ENST00000473176		E9PCH4	1651 aa		13.69	□□□□□ -0.22
TOX4-208	ENST00000473176	ZMYM3	Q14202	1370 aa		13.69	□□□□□ -0.22
TOX4-208	ENST00000473176	NPAT	Q14207	1427 aa		13.68	□□□□□ -0.22
TOX4-208	ENST00000473176	MROH2A	A6NES4	1674 aa		13.68	□□□□□ -0.22
TOX4-208	ENST00000473176	RIMS1	Q86UR5	1692 aa	Known RBP	13.66	□□□□□ -0.22
TOX4-208	ENST00000473176	RPRD2	Q5VT52	1461 aa	Known RBP	13.66	□□□□□ -0.22
TOX4-208	ENST00000473176	KDM4F	A0A1W2PPD8	638 aa		13.65	□□□□□ -0.22
TOX4-208	ENST00000473176	CEBPA	P49715	358 aa	Predicted RBP	13.65	□□□□□ -0.22
TOX4-208	ENST00000473176	NCBP3	Q53F19	620 aa	Known RBP	13.65	□□□□□ -0.22
TOX4-208	ENST00000473176	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.65	□□□□□ -0.22
TOX4-208	ENST00000473176	ANKRD30B	Q9BXX2	1392 aa		13.65	□□□□□ -0.22
TOX4-208	ENST00000473176	PTPRT	O14522	1441 aa		13.64	□□□□□ -0.23
TOX4-208	ENST00000473176	PLA2R1	Q13018	1463 aa		13.64	□□□□□ -0.23
TOX4-208	ENST00000473176	CCER1	Q8TC90	406 aa	Predicted RBP	13.64	□□□□□ -0.23
TOX4-208	ENST00000473176	C3	P01024	1663 aa		13.63	□□□□□ -0.23
TOX4-208	ENST00000473176	NOS1	P29475	1434 aa		13.63	□□□□□ -0.23
TOX4-208	ENST00000473176	ERVK-7	P63135	1459 aa		13.62	□□□□□ -0.23
TOX4-208	ENST00000473176	PREX1	Q8TCU6	1659 aa		13.62	□□□□□ -0.23
TOX4-208	ENST00000473176	PTPRM	P28827	1452 aa		13.61	□□□□□ -0.23
TOX4-208	ENST00000473176	CFAP65	Q6ZU64	1925 aa	Known RBP	13.61	□□□□□ -0.23
TOX4-208	ENST00000473176	SPATA31D1	Q6ZQQ2	1576 aa		13.61	□□□□□ -0.23
TOX4-208	ENST00000473176	SPHKAP	Q2M3C7	1700 aa		13.61	□□□□□ -0.23
TOX4-208	ENST00000473176	CLSPN	Q9HAW4	1339 aa		13.61	□□□□□ -0.23
TOX4-208	ENST00000473176	TRPM2	O94759	1503 aa		13.59	□□□□□ -0.23
TOX4-208	ENST00000473176	SYNM	O15061	1565 aa		13.59	□□□□□ -0.23
TOX4-208	ENST00000473176	SIN3A	Q96ST3	1273 aa		13.59	□□□□□ -0.23
TOX4-208	ENST00000473176	SCAF1	Q9H7N4	1312 aa	Known RBP	13.58	□□□□□ -0.24
TOX4-208	ENST00000473176	TNR	Q92752	1358 aa		13.58	□□□□□ -0.24
TOX4-208	ENST00000473176	UGGT1	Q9NYU2	1555 aa		13.57	□□□□□ -0.24
TOX4-208	ENST00000473176	IDI1	Q13907	227 aa		13.56	□□□□□ -0.24
TOX4-208	ENST00000473176	SLC52A1	Q9NWF4	448 aa		13.56	□□□□□ -0.24
TOX4-208	ENST00000473176	CLTCL1	P53675	1640 aa		13.56	□□□□□ -0.24
TOX4-208	ENST00000473176	CCDC144A	A2RUR9	1427 aa		13.56	□□□□□ -0.24
TOX4-208	ENST00000473176	PIK3C2B	O00750	1634 aa		13.55	□□□□□ -0.24
TOX4-208	ENST00000473176	NEUROD1	Q13562	356 aa		13.54	□□□□□ -0.24
TOX4-208	ENST00000473176	NPM3	O75607	178 aa	Known RBP	13.53	□□□□□ -0.24
TOX4-208	ENST00000473176	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.53	□□□□□ -0.24
TOX4-208	ENST00000473176	NLRP1	Q9C000	1473 aa		13.52	□□□□□ -0.25
TOX4-208	ENST00000473176	SPATA31E1	Q6ZUB1	1445 aa		13.5	□□□□□ -0.25
TOX4-208	ENST00000473176	MYO3A	Q8NEV4	1616 aa		13.5	□□□□□ -0.25
TOX4-208	ENST00000473176	SETD1B	Q9UPS6	1966 aa	Known RBP	13.49	□□□□□ -0.25
TOX4-208	ENST00000473176	KIF1B	O60333	1816 aa		13.49	□□□□□ -0.25
TOX4-208	ENST00000473176	CHGA	P10645	457 aa	Known RBP	13.49	□□□□□ -0.25
TOX4-208	ENST00000473176	CNKSR2	Q8WXI2	1034 aa		13.49	□□□□□ -0.25
TOX4-208	ENST00000473176	TMEM131L	A2VDJ0	1609 aa		13.49	□□□□□ -0.25
TOX4-208	ENST00000473176	A2ML1	A8K2U0	1454 aa		13.48	□□□□□ -0.25
TOX4-208	ENST00000473176	NEURL4	Q96JN8	1562 aa		13.48	□□□□□ -0.25
TOX4-208	ENST00000473176	ADGRB3	O60242	1522 aa		13.48	□□□□□ -0.25
TOX4-208	ENST00000473176	RGL3	Q3MIN7	710 aa		13.47	□□□□□ -0.25
TOX4-208	ENST00000473176	STAG3	Q9UJ98	1225 aa		13.47	□□□□□ -0.25
TOX4-208	ENST00000473176	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.46	□□□□□ -0.25
TOX4-208	ENST00000473176	L3MBTL2	Q969R5	705 aa		13.46	□□□□□ -0.25
TOX4-208	ENST00000473176	UBR1	Q8IWV7	1749 aa		13.46	□□□□□ -0.25
TOX4-208	ENST00000473176	KDM5A	P29375	1690 aa	Known RBP	13.46	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms