RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TRAPPC8Q9Y2L5 1435 aa6.78□□□□□ -1.32
TM4SF1-202ENST00000472441 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
TM4SF1-202ENST00000472441 ASXL2Q76L83 1435 aa6.76□□□□□ -1.33
TM4SF1-202ENST00000472441 FAM135AQ9P2D6 1515 aa6.76□□□□□ -1.33
TM4SF1-202ENST00000472441 CCER2I3L3R5 266 aa6.76□□□□□ -1.33
TM4SF1-202ENST00000472441 ZMYM4Q5VZL5 1548 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 CCDC7Q96M83 1385 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 RICTORQ6R327 1708 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 CCDC144AA2RUR9 1427 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 BCORL1Q5H9F3 1711 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 KIF7Q2M1P5 1343 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 FANCAO15360 1455 aa6.75□□□□□ -1.33
TM4SF1-202ENST00000472441 KIF3BO15066 747 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 ABCC1P33527 1531 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 KDM5DQ9BY66 1539 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 NEO1Q92859 1461 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 USP47Q96K76 1375 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 MAST1Q9Y2H9 1570 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 DUOX2Q9NRD8 1548 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 SCAPERQ9BY12 1400 aa6.74□□□□□ -1.33
TM4SF1-202ENST00000472441 FRMPD1Q5SYB0 1578 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 REREQ9P2R6 1566 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 CYB5RLQ6IPT4 315 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 SPATA31E1Q6ZUB1 1445 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 ADGRL1O94910 1474 aa6.73□□□□□ -1.33
TM4SF1-202ENST00000472441 PLXNC1O60486 1568 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 KDM5CP41229 1560 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 ROCK2O75116 1388 aaKnown RBP6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 CCDC184Q52MB2 194 aa6.72□□□□□ -1.33
TM4SF1-202ENST00000472441 PLA2R1Q13018 1463 aa6.71□□□□□ -1.34
TM4SF1-202ENST00000472441 UNC13BO14795 1591 aa6.71□□□□□ -1.34
TM4SF1-202ENST00000472441 FAM9BQ8IZU0 186 aa6.71□□□□□ -1.34
TM4SF1-202ENST00000472441 PRKRIP1Q9H875 184 aaPredicted RBP6.71□□□□□ -1.34
TM4SF1-202ENST00000472441 CD109Q6YHK3 1445 aa6.71□□□□□ -1.34
TM4SF1-202ENST00000472441 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
TM4SF1-202ENST00000472441 RTEL1-TNFRSF6BF6WH68 1400 aa6.7□□□□□ -1.34
TM4SF1-202ENST00000472441 UHRF1BP1Q6BDS2 1440 aa6.7□□□□□ -1.34
TM4SF1-202ENST00000472441 INO80Q9ULG1 1556 aaPredicted RBP6.7□□□□□ -1.34
TM4SF1-202ENST00000472441 MRS2Q9HD23 443 aa6.7□□□□□ -1.34
TM4SF1-202ENST00000472441 IQGAP3Q86VI3 1631 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 KANK1Q14678 1352 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 GGT6Q6P531 493 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 RALGAPBQ86X10 1494 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 ATP7AQ04656 1500 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 ZFYVE16Q7Z3T8 1539 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 RAPGEF3O95398 923 aa6.69□□□□□ -1.34
TM4SF1-202ENST00000472441 PLPPR3Q6T4P5 718 aa6.68□□□□□ -1.34
TM4SF1-202ENST00000472441 DHX29Q7Z478 1369 aaKnown RBP6.68□□□□□ -1.34
TM4SF1-202ENST00000472441 A2MP01023 1474 aa6.68□□□□□ -1.34
TM4SF1-202ENST00000472441 ARHGEF40Q8TER5 1519 aa6.68□□□□□ -1.34
TM4SF1-202ENST00000472441 PRAG1Q86YV5 1406 aa6.68□□□□□ -1.34
TM4SF1-202ENST00000472441 CHGAP10645 457 aaKnown RBP6.67□□□□□ -1.34
TM4SF1-202ENST00000472441 TSPOAP1O95153 1857 aa6.67□□□□□ -1.34
TM4SF1-202ENST00000472441 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
TM4SF1-202ENST00000472441 EIF2AK4Q9P2K8 1649 aaKnown RBP6.67□□□□□ -1.34
TM4SF1-202ENST00000472441 MAGI2Q86UL8 1455 aa6.67□□□□□ -1.34
TM4SF1-202ENST00000472441 BCANQ96GW7 911 aa6.66□□□□□ -1.34
TM4SF1-202ENST00000472441 HECW2Q9P2P5 1572 aa6.66□□□□□ -1.34
TM4SF1-202ENST00000472441 E9PCH4 1651 aa6.66□□□□□ -1.34
TM4SF1-202ENST00000472441 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
TM4SF1-202ENST00000472441 FKBP8Q14318 412 aa6.65□□□□□ -1.34
TM4SF1-202ENST00000472441 ARID4BQ4LE39 1312 aaPredicted RBP6.65□□□□□ -1.34
TM4SF1-202ENST00000472441 ATP10AO60312 1499 aa6.65□□□□□ -1.35
TM4SF1-202ENST00000472441 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 FAM69CQ0P6D2 419 aa6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 KIDINS220Q9ULH0 1771 aa6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 CFAP65Q6ZU64 1925 aaKnown RBP6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 TRPM1Q7Z4N2 1603 aa6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 WASHC2CQ9Y4E1 1318 aa6.64□□□□□ -1.35
TM4SF1-202ENST00000472441 NEFLP07196 543 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 POGZQ7Z3K3 1410 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 MROH2AA6NES4 1674 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 TMF1P82094 1093 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 RNF17Q9BXT8 1623 aaKnown RBP6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 DEPDC5O75140 1603 aa6.63□□□□□ -1.35
TM4SF1-202ENST00000472441 ZC3H13Q5T200 1668 aaKnown RBP6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 ABCA6Q8N139 1617 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 MLH3Q9UHC1 1453 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 UGGT1Q9NYU2 1555 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 CFAP70Q5T0N1 1121 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 TESK2Q96S53 571 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 AGLP35573 1532 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 CLTCL1P53675 1640 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 DIP2CQ9Y2E4 1556 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 PTPRTO14522 1441 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 TET3O43151 1660 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 TRPM2O94759 1503 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 DISP3Q9P2K9 1392 aa6.62□□□□□ -1.35
TM4SF1-202ENST00000472441 CC2D1BQ5T0F9 858 aaKnown RBP6.61□□□□□ -1.35
TM4SF1-202ENST00000472441 PANK3Q9H999 370 aa6.61□□□□□ -1.35
TM4SF1-202ENST00000472441 GPRASP1Q5JY77 1395 aa6.61□□□□□ -1.35
TM4SF1-202ENST00000472441 ADGRF5Q8IZF2 1346 aa6.61□□□□□ -1.35
TM4SF1-202ENST00000472441 IRX6P78412 446 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms