RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 EPAS1Q99814 870 aa13.04□□□□□ -0.32
PTP4A1-202ENST00000470661 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.33
PTP4A1-202ENST00000470661 OSBPP22059 807 aa13.02□□□□□ -0.33
PTP4A1-202ENST00000470661 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
PTP4A1-202ENST00000470661 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
PTP4A1-202ENST00000470661 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
PTP4A1-202ENST00000470661 PSEN2P49810 448 aa13□□□□□ -0.33
PTP4A1-202ENST00000470661 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
PTP4A1-202ENST00000470661 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
PTP4A1-202ENST00000470661 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
PTP4A1-202ENST00000470661 MAP3K7O43318 606 aa12.98□□□□□ -0.33
PTP4A1-202ENST00000470661 PBX2P40425 430 aa12.98□□□□□ -0.33
PTP4A1-202ENST00000470661 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
PTP4A1-202ENST00000470661 ARHGAP33O14559 1287 aa12.97□□□□□ -0.33
PTP4A1-202ENST00000470661 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
PTP4A1-202ENST00000470661 PTPREP23469 700 aa12.96□□□□□ -0.33
PTP4A1-202ENST00000470661 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
PTP4A1-202ENST00000470661 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
PTP4A1-202ENST00000470661 COL9A1P20849 921 aa12.93□□□□□ -0.34
PTP4A1-202ENST00000470661 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
PTP4A1-202ENST00000470661 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
PTP4A1-202ENST00000470661 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
PTP4A1-202ENST00000470661 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTP4A1-202ENST00000470661 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
PTP4A1-202ENST00000470661 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
PTP4A1-202ENST00000470661 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
PTP4A1-202ENST00000470661 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
PTP4A1-202ENST00000470661 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
PTP4A1-202ENST00000470661 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
PTP4A1-202ENST00000470661 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
PTP4A1-202ENST00000470661 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
PTP4A1-202ENST00000470661 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
PTP4A1-202ENST00000470661 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
PTP4A1-202ENST00000470661 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
PTP4A1-202ENST00000470661 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
PTP4A1-202ENST00000470661 BCANQ96GW7 911 aa12.83□□□□□ -0.36
PTP4A1-202ENST00000470661 NPDC1Q9NQX5 325 aaPredicted RBP12.82□□□□□ -0.36
PTP4A1-202ENST00000470661 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
PTP4A1-202ENST00000470661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTP4A1-202ENST00000470661 TK2O00142 265 aa12.78□□□□□ -0.36
PTP4A1-202ENST00000470661 PTGDRQ13258 359 aa12.78□□□□□ -0.36
PTP4A1-202ENST00000470661 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
PTP4A1-202ENST00000470661 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
PTP4A1-202ENST00000470661 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
PTP4A1-202ENST00000470661 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
PTP4A1-202ENST00000470661 PRSS12P56730 875 aa12.76□□□□□ -0.37
PTP4A1-202ENST00000470661 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
PTP4A1-202ENST00000470661 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
PTP4A1-202ENST00000470661 FCHSD2O94868 740 aa12.75□□□□□ -0.37
PTP4A1-202ENST00000470661 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
PTP4A1-202ENST00000470661 GPR37O15354 613 aa12.74□□□□□ -0.37
PTP4A1-202ENST00000470661 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
PTP4A1-202ENST00000470661 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
PTP4A1-202ENST00000470661 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
PTP4A1-202ENST00000470661 HRO43593 1189 aa12.73□□□□□ -0.37
PTP4A1-202ENST00000470661 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
PTP4A1-202ENST00000470661 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
PTP4A1-202ENST00000470661 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
PTP4A1-202ENST00000470661 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 FECHP22830 423 aa12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 TTC13Q8NBP0 860 aa12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
PTP4A1-202ENST00000470661 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
PTP4A1-202ENST00000470661 HIC1Q14526 733 aa12.67□□□□□ -0.38
PTP4A1-202ENST00000470661 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
PTP4A1-202ENST00000470661 SMAPO00193 183 aa12.66□□□□□ -0.38
PTP4A1-202ENST00000470661 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
PTP4A1-202ENST00000470661 GNPATO15228 680 aa12.65□□□□□ -0.38
PTP4A1-202ENST00000470661 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
PTP4A1-202ENST00000470661 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
PTP4A1-202ENST00000470661 MYT1LQ9UL68 1186 aa12.64□□□□□ -0.39
PTP4A1-202ENST00000470661 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
PTP4A1-202ENST00000470661 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
PTP4A1-202ENST00000470661 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
PTP4A1-202ENST00000470661 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
PTP4A1-202ENST00000470661 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
PTP4A1-202ENST00000470661 TATDN2Q93075 761 aa12.62□□□□□ -0.39
PTP4A1-202ENST00000470661 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
PTP4A1-202ENST00000470661 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
PTP4A1-202ENST00000470661 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
PTP4A1-202ENST00000470661 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
PTP4A1-202ENST00000470661 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
PTP4A1-202ENST00000470661 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
PTP4A1-202ENST00000470661 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
PTP4A1-202ENST00000470661 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
PTP4A1-202ENST00000470661 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
PTP4A1-202ENST00000470661 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
PTP4A1-202ENST00000470661 EYA1Q99502 592 aa12.55□□□□□ -0.4
PTP4A1-202ENST00000470661 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
PTP4A1-202ENST00000470661 ZMYND10O75800 440 aa12.54□□□□□ -0.4
PTP4A1-202ENST00000470661 WNT2BQ93097 391 aa12.54□□□□□ -0.4
PTP4A1-202ENST00000470661 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
PTP4A1-202ENST00000470661 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
PTP4A1-202ENST00000470661 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
PTP4A1-202ENST00000470661 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
PTP4A1-202ENST00000470661 METTL3Q86U44 580 aaKnown RBP12.5□□□□□ -0.41
PTP4A1-202ENST00000470661 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
PTP4A1-202ENST00000470661 OATP04181 439 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms