RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
HOXB3-205ENST00000470495 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
HOXB3-205ENST00000470495 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.1
HOXB3-205ENST00000470495 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
HOXB3-205ENST00000470495 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
HOXB3-205ENST00000470495 NBPF1Q3BBV0 1214 aa21.9■■□□□ 1.1
HOXB3-205ENST00000470495 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
HOXB3-205ENST00000470495 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.1
HOXB3-205ENST00000470495 KDM6BO15054 1643 aa21.89■■□□□ 1.09
HOXB3-205ENST00000470495 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
HOXB3-205ENST00000470495 IL27Q8NEV9 243 aa21.88■■□□□ 1.09
HOXB3-205ENST00000470495 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
HOXB3-205ENST00000470495 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
HOXB3-205ENST00000470495 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
HOXB3-205ENST00000470495 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
HOXB3-205ENST00000470495 DNMT1P26358 1616 aaKnown RBP21.85■■□□□ 1.09
HOXB3-205ENST00000470495 NEFMP07197 916 aa21.85■■□□□ 1.09
HOXB3-205ENST00000470495 ANP32AP39687 249 aaKnown RBP21.84■■□□□ 1.09
HOXB3-205ENST00000470495 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
HOXB3-205ENST00000470495 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
HOXB3-205ENST00000470495 ZMYND15Q9H091 742 aa21.84■■□□□ 1.09
HOXB3-205ENST00000470495 CDCA8Q53HL2 280 aa21.83■■□□□ 1.09
HOXB3-205ENST00000470495 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
HOXB3-205ENST00000470495 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
HOXB3-205ENST00000470495 ESF1Q9H501 851 aaKnown RBP21.82■■□□□ 1.08
HOXB3-205ENST00000470495 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
HOXB3-205ENST00000470495 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
HOXB3-205ENST00000470495 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
HOXB3-205ENST00000470495 KLHL34Q8N239 644 aa21.81■■□□□ 1.08
HOXB3-205ENST00000470495 PANK3Q9H999 370 aa21.79■■□□□ 1.08
HOXB3-205ENST00000470495 RALBP1Q15311 655 aa21.78■■□□□ 1.08
HOXB3-205ENST00000470495 PZPP20742 1482 aa21.78■■□□□ 1.08
HOXB3-205ENST00000470495 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
HOXB3-205ENST00000470495 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.08
HOXB3-205ENST00000470495 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.08
HOXB3-205ENST00000470495 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
HOXB3-205ENST00000470495 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
HOXB3-205ENST00000470495 SAFB2Q14151 953 aaKnown RBP eCLIP21.76■■□□□ 1.07
HOXB3-205ENST00000470495 MLECQ14165 292 aa21.75■■□□□ 1.07
HOXB3-205ENST00000470495 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
HOXB3-205ENST00000470495 SYCP2Q9BX26 1530 aa21.74■■□□□ 1.07
HOXB3-205ENST00000470495 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
HOXB3-205ENST00000470495 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
HOXB3-205ENST00000470495 HSP90AA2PQ14568 343 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-205ENST00000470495 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
HOXB3-205ENST00000470495 MYBBP1AQ9BQG0 1328 aaKnown RBP21.71■■□□□ 1.07
HOXB3-205ENST00000470495 CDK11BP21127 795 aaKnown RBP21.71■■□□□ 1.07
HOXB3-205ENST00000470495 ARXQ96QS3 562 aa21.7■■□□□ 1.06
HOXB3-205ENST00000470495 ABCA8O94911 1581 aa21.7■■□□□ 1.06
HOXB3-205ENST00000470495 ZBED9Q6R2W3 1325 aa21.7■■□□□ 1.06
HOXB3-205ENST00000470495 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
HOXB3-205ENST00000470495 STK26Q9P289 416 aa21.68■■□□□ 1.06
HOXB3-205ENST00000470495 ABCC10Q5T3U5 1492 aa21.67■■□□□ 1.06
HOXB3-205ENST00000470495 CANXP27824 592 aaKnown RBP21.67■■□□□ 1.06
HOXB3-205ENST00000470495 ADGRL2O95490 1459 aa21.66■■□□□ 1.06
HOXB3-205ENST00000470495 PAXIP1Q6ZW49 1069 aaPredicted RBP21.65■■□□□ 1.06
HOXB3-205ENST00000470495 PLCH2O75038 1416 aa21.65■■□□□ 1.06
HOXB3-205ENST00000470495 NUDCQ9Y266 331 aa21.65■■□□□ 1.06
HOXB3-205ENST00000470495 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.06
HOXB3-205ENST00000470495 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.05
HOXB3-205ENST00000470495 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
HOXB3-205ENST00000470495 CFAP70Q5T0N1 1121 aa21.64■■□□□ 1.05
HOXB3-205ENST00000470495 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
HOXB3-205ENST00000470495 NEUROD2Q15784 382 aa21.63■■□□□ 1.05
HOXB3-205ENST00000470495 ABCC2Q92887 1545 aa21.62■■□□□ 1.05
HOXB3-205ENST00000470495 SHANK2Q9UPX8 1470 aa21.62■■□□□ 1.05
HOXB3-205ENST00000470495 HSP90AA1P07900 732 aaKnown RBP21.62■■□□□ 1.05
HOXB3-205ENST00000470495 RBM10P98175 930 aaKnown RBP21.61■■□□□ 1.05
HOXB3-205ENST00000470495 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
HOXB3-205ENST00000470495 POGKQ9P215 609 aa21.6■■□□□ 1.05
HOXB3-205ENST00000470495 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
HOXB3-205ENST00000470495 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
HOXB3-205ENST00000470495 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
HOXB3-205ENST00000470495 NOP58Q9Y2X3 529 aaKnown RBP21.58■■□□□ 1.05
HOXB3-205ENST00000470495 MBD5Q9P267 1494 aa21.58■■□□□ 1.05
HOXB3-205ENST00000470495 FANCAO15360 1455 aa21.57■■□□□ 1.04
HOXB3-205ENST00000470495 CHD1O14646 1710 aa21.57■■□□□ 1.04
HOXB3-205ENST00000470495 ADGRL1O94910 1474 aa21.57■■□□□ 1.04
HOXB3-205ENST00000470495 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
HOXB3-205ENST00000470495 TMEM132EQ6IEE7 984 aa21.55■■□□□ 1.04
HOXB3-205ENST00000470495 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
HOXB3-205ENST00000470495 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
HOXB3-205ENST00000470495 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
HOXB3-205ENST00000470495 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
HOXB3-205ENST00000470495 RCAN3Q9UKA8 241 aa21.53■■□□□ 1.04
HOXB3-205ENST00000470495 USP35Q9P2H5 1018 aa21.53■■□□□ 1.04
HOXB3-205ENST00000470495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
HOXB3-205ENST00000470495 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
HOXB3-205ENST00000470495 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
HOXB3-205ENST00000470495 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
HOXB3-205ENST00000470495 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
HOXB3-205ENST00000470495 RALGAPBQ86X10 1494 aa21.49■■□□□ 1.03
HOXB3-205ENST00000470495 ERBINQ96RT1 1412 aa21.49■■□□□ 1.03
HOXB3-205ENST00000470495 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
HOXB3-205ENST00000470495 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
HOXB3-205ENST00000470495 DUOX2Q9NRD8 1548 aa21.48■■□□□ 1.03
HOXB3-205ENST00000470495 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
HOXB3-205ENST00000470495 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
HOXB3-205ENST00000470495 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
HOXB3-205ENST00000470495 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms