RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 FER1L4A9Z1Z3 1794 aa28.7■■■□□ 2.19
PCCB-208ENST00000468777 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
PCCB-208ENST00000468777 RNF17Q9BXT8 1623 aaKnown RBP28.69■■■□□ 2.18
PCCB-208ENST00000468777 MROH1Q8NDA8 1641 aa28.67■■■□□ 2.18
PCCB-208ENST00000468777 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
PCCB-208ENST00000468777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.64■■■□□ 2.18
PCCB-208ENST00000468777 DEPDC5O75140 1603 aa28.64■■■□□ 2.17
PCCB-208ENST00000468777 CLTCQ00610 1675 aaKnown RBP28.61■■■□□ 2.17
PCCB-208ENST00000468777 PRDM15P57071 1507 aaPredicted RBP28.61■■■□□ 2.17
PCCB-208ENST00000468777 ESF1Q9H501 851 aaKnown RBP28.61■■■□□ 2.17
PCCB-208ENST00000468777 PLPPR3Q6T4P5 718 aa28.58■■■□□ 2.17
PCCB-208ENST00000468777 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.16
PCCB-208ENST00000468777 KDM5DQ9BY66 1539 aa28.57■■■□□ 2.16
PCCB-208ENST00000468777 CEP152O94986 1710 aa28.56■■■□□ 2.16
PCCB-208ENST00000468777 UNC13BO14795 1591 aa28.56■■■□□ 2.16
PCCB-208ENST00000468777 PTPRMP28827 1452 aa28.55■■■□□ 2.16
PCCB-208ENST00000468777 ABCC3O15438 1527 aa28.54■■■□□ 2.16
PCCB-208ENST00000468777 PPP6R1Q9UPN7 881 aa28.54■■■□□ 2.16
PCCB-208ENST00000468777 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
PCCB-208ENST00000468777 CEBPAP49715 358 aaPredicted RBP28.53■■■□□ 2.16
PCCB-208ENST00000468777 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
PCCB-208ENST00000468777 KANK1Q14678 1352 aa28.51■■■□□ 2.16
PCCB-208ENST00000468777 ZC3H13Q5T200 1668 aaKnown RBP28.51■■■□□ 2.15
PCCB-208ENST00000468777 VWDEQ8N2E2 1590 aa28.5■■■□□ 2.15
PCCB-208ENST00000468777 C3P01024 1663 aa28.5■■■□□ 2.15
PCCB-208ENST00000468777 MROH2AA6NES4 1674 aa28.49■■■□□ 2.15
PCCB-208ENST00000468777 FAM135AQ9P2D6 1515 aa28.49■■■□□ 2.15
PCCB-208ENST00000468777 NUP155O75694 1391 aa28.49■■■□□ 2.15
PCCB-208ENST00000468777 ZMYM3Q14202 1370 aa28.49■■■□□ 2.15
PCCB-208ENST00000468777 RAB3GAP2Q9H2M9 1393 aa28.49■■■□□ 2.15
PCCB-208ENST00000468777 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
PCCB-208ENST00000468777 TRIM52Q96A61 297 aa28.45■■■□□ 2.15
PCCB-208ENST00000468777 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.14
PCCB-208ENST00000468777 LMTK2Q8IWU2 1503 aa28.42■■■□□ 2.14
PCCB-208ENST00000468777 CFAP65Q6ZU64 1925 aaKnown RBP28.41■■■□□ 2.14
PCCB-208ENST00000468777 EFCAB6Q5THR3 1501 aa28.39■■■□□ 2.13
PCCB-208ENST00000468777 TET3O43151 1660 aa28.38■■■□□ 2.13
PCCB-208ENST00000468777 PZPP20742 1482 aa28.38■■■□□ 2.13
PCCB-208ENST00000468777 FBXO31Q5XUX0 539 aaPredicted RBP28.38■■■□□ 2.13
PCCB-208ENST00000468777 NPATQ14207 1427 aa28.37■■■□□ 2.13
PCCB-208ENST00000468777 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
PCCB-208ENST00000468777 E9PCH4 1651 aa28.33■■■□□ 2.13
PCCB-208ENST00000468777 ARHGAP31Q2M1Z3 1444 aa28.33■■■□□ 2.13
PCCB-208ENST00000468777 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
PCCB-208ENST00000468777 PREX1Q8TCU6 1659 aa28.3■■■□□ 2.12
PCCB-208ENST00000468777 ERVK-7P63135 1459 aa28.28■■■□□ 2.12
PCCB-208ENST00000468777 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
PCCB-208ENST00000468777 HRCP23327 699 aa28.25■■■□□ 2.11
PCCB-208ENST00000468777 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
PCCB-208ENST00000468777 PKD2Q13563 968 aa28.25■■■□□ 2.11
PCCB-208ENST00000468777 SETD1BQ9UPS6 1966 aaKnown RBP28.24■■■□□ 2.11
PCCB-208ENST00000468777 RPRD2Q5VT52 1461 aaKnown RBP28.24■■■□□ 2.11
PCCB-208ENST00000468777 TNRQ92752 1358 aa28.24■■■□□ 2.11
PCCB-208ENST00000468777 FOXD1Q16676 465 aa28.23■■■□□ 2.11
PCCB-208ENST00000468777 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
PCCB-208ENST00000468777 MYO3AQ8NEV4 1616 aa28.21■■■□□ 2.11
PCCB-208ENST00000468777 SYNMO15061 1565 aa28.2■■■□□ 2.11
PCCB-208ENST00000468777 NOS1P29475 1434 aa28.19■■■□□ 2.1
PCCB-208ENST00000468777 SPHKAPQ2M3C7 1700 aa28.17■■■□□ 2.1
PCCB-208ENST00000468777 UHRF1BP1Q6BDS2 1440 aa28.16■■■□□ 2.1
PCCB-208ENST00000468777 UGGT1Q9NYU2 1555 aa28.15■■■□□ 2.1
PCCB-208ENST00000468777 LMTK3Q96Q04 1460 aa28.14■■■□□ 2.1
PCCB-208ENST00000468777 CEP170BQ9Y4F5 1589 aaPredicted RBP28.12■■■□□ 2.09
PCCB-208ENST00000468777 PTPRTO14522 1441 aa28.1■■■□□ 2.09
PCCB-208ENST00000468777 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
PCCB-208ENST00000468777 NLRP1Q9C000 1473 aa28.1■■■□□ 2.09
PCCB-208ENST00000468777 ZNF142P52746 1687 aaPredicted RBP28.1■■■□□ 2.09
PCCB-208ENST00000468777 IDI1Q13907 227 aa28.09■■■□□ 2.09
PCCB-208ENST00000468777 PIK3C2BO00750 1634 aa28.08■■■□□ 2.09
PCCB-208ENST00000468777 TRPM2O94759 1503 aa28.07■■■□□ 2.08
PCCB-208ENST00000468777 A2ML1A8K2U0 1454 aa28.07■■■□□ 2.08
PCCB-208ENST00000468777 HSPA2P54652 639 aa28.07■■■□□ 2.08
PCCB-208ENST00000468777 SLC52A1Q9NWF4 448 aa28.04■■■□□ 2.08
PCCB-208ENST00000468777 CLTCL1P53675 1640 aa28.04■■■□□ 2.08
PCCB-208ENST00000468777 UBR1Q8IWV7 1749 aa28.02■■■□□ 2.08
PCCB-208ENST00000468777 DHX57Q6P158 1386 aaKnown RBP28.01■■■□□ 2.07
PCCB-208ENST00000468777 STAG3Q9UJ98 1225 aa28■■■□□ 2.07
PCCB-208ENST00000468777 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
PCCB-208ENST00000468777 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
PCCB-208ENST00000468777 ADGRB3O60242 1522 aa27.98■■■□□ 2.07
PCCB-208ENST00000468777 ANKRD30BQ9BXX2 1392 aa27.96■■■□□ 2.07
PCCB-208ENST00000468777 CCDC144AA2RUR9 1427 aa27.96■■■□□ 2.07
PCCB-208ENST00000468777 TMEM131LA2VDJ0 1609 aa27.96■■■□□ 2.07
PCCB-208ENST00000468777 THEMISQ8N1K5 641 aaPredicted RBP27.93■■■□□ 2.06
PCCB-208ENST00000468777 KDM5AP29375 1690 aaKnown RBP27.93■■■□□ 2.06
PCCB-208ENST00000468777 KIF1BO60333 1816 aa27.92■■■□□ 2.06
PCCB-208ENST00000468777 TMEM2Q9UHN6 1383 aa27.86■■■□□ 2.05
PCCB-208ENST00000468777 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
PCCB-208ENST00000468777 NCKAP5LQ9HCH0 1330 aa27.84■■■□□ 2.05
PCCB-208ENST00000468777 SLIT1O75093 1534 aa27.84■■■□□ 2.05
PCCB-208ENST00000468777 ZNF326Q5BKZ1 582 aaKnown RBP27.84■■■□□ 2.05
PCCB-208ENST00000468777 ARHGAP23Q9P227 1491 aa27.83■■■□□ 2.05
PCCB-208ENST00000468777 LTKP29376 864 aa27.81■■■□□ 2.04
PCCB-208ENST00000468777 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
PCCB-208ENST00000468777 NUTM2DQ5VT03 806 aaPredicted RBP27.81■■■□□ 2.04
PCCB-208ENST00000468777 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
PCCB-208ENST00000468777 SPATA31E1Q6ZUB1 1445 aa27.8■■■□□ 2.04
PCCB-208ENST00000468777 SIN3AQ96ST3 1273 aa27.8■■■□□ 2.04
PCCB-208ENST00000468777 RIMS2Q9UQ26 1411 aa27.79■■■□□ 2.04
PCCB-208ENST00000468777 ANKLE2Q86XL3 938 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms