RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 EIF4G1Q04637 1599 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-204ENST00000468545 GRXCR2A6NFK2 248 aa7.09□□□□□ -1.27
TMEM39A-204ENST00000468545 NUDT7P0C024 238 aa7.09□□□□□ -1.27
TMEM39A-204ENST00000468545 MMRN1Q13201 1228 aa7.09□□□□□ -1.27
TMEM39A-204ENST00000468545 DDX12PQ92771 950 aa7.09□□□□□ -1.27
TMEM39A-204ENST00000468545 JPH4Q96JJ6 628 aa7.08□□□□□ -1.28
TMEM39A-204ENST00000468545 WIZO95785 1651 aa7.08□□□□□ -1.28
TMEM39A-204ENST00000468545 PHF14O94880 888 aa7.07□□□□□ -1.28
TMEM39A-204ENST00000468545 OSBPP22059 807 aa7.07□□□□□ -1.28
TMEM39A-204ENST00000468545 RBM26Q5T8P6 1007 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-204ENST00000468545 EPAS1Q99814 870 aa7.07□□□□□ -1.28
TMEM39A-204ENST00000468545 ZNF687Q8N1G0 1237 aa7.06□□□□□ -1.28
TMEM39A-204ENST00000468545 FOSBP53539 338 aa7.05□□□□□ -1.28
TMEM39A-204ENST00000468545 GPIHBP1Q8IV16 184 aa7.05□□□□□ -1.28
TMEM39A-204ENST00000468545 PCDHGA10Q9Y5H3 936 aa7.05□□□□□ -1.28
TMEM39A-204ENST00000468545 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
TMEM39A-204ENST00000468545 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
TMEM39A-204ENST00000468545 PSDA5PKW4 1024 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-204ENST00000468545 PRKCSHP14314 528 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-204ENST00000468545 TYW1BQ6NUM6 668 aa7.04□□□□□ -1.28
TMEM39A-204ENST00000468545 FBXW7Q969H0 707 aa7.04□□□□□ -1.28
TMEM39A-204ENST00000468545 EN1Q05925 392 aaPredicted RBP7.03□□□□□ -1.28
TMEM39A-204ENST00000468545 ZNF454Q8N9F8 522 aa7.03□□□□□ -1.28
TMEM39A-204ENST00000468545 ZC3H15Q8WU90 426 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-204ENST00000468545 LHX6Q9UPM6 363 aa7.03□□□□□ -1.28
TMEM39A-204ENST00000468545 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-204ENST00000468545 SMARCA2P51531 1590 aa7.02□□□□□ -1.29
TMEM39A-204ENST00000468545 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-204ENST00000468545 NUTM2FA1L443 756 aa7.01□□□□□ -1.29
TMEM39A-204ENST00000468545 MAP3K7O43318 606 aa7.01□□□□□ -1.29
TMEM39A-204ENST00000468545 PPP4R3BQ5MIZ7 849 aa7.01□□□□□ -1.29
TMEM39A-204ENST00000468545 ZDHHC16Q969W1 377 aa7.01□□□□□ -1.29
TMEM39A-204ENST00000468545 GPR37O15354 613 aa7□□□□□ -1.29
TMEM39A-204ENST00000468545 NCAPD3P42695 1498 aa6.99□□□□□ -1.29
TMEM39A-204ENST00000468545 ANKRD13DQ6ZTN6 518 aa6.99□□□□□ -1.29
TMEM39A-204ENST00000468545 RBM33Q96EV2 1170 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-204ENST00000468545 ZMYND10O75800 440 aa6.98□□□□□ -1.29
TMEM39A-204ENST00000468545 FCHSD2O94868 740 aa6.98□□□□□ -1.29
TMEM39A-204ENST00000468545 TOP2AP11388 1531 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 PTGDRQ13258 359 aa6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 TSR1Q2NL82 804 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 ADAM33Q9BZ11 813 aa6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 PEG3Q9GZU2 1588 aa6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 CDHR5Q9HBB8 845 aa6.97□□□□□ -1.29
TMEM39A-204ENST00000468545 HIC1Q14526 733 aa6.96□□□□□ -1.3
TMEM39A-204ENST00000468545 C6orf132Q5T0Z8 1188 aa6.96□□□□□ -1.3
TMEM39A-204ENST00000468545 BARGINQ6ZT62 677 aa6.96□□□□□ -1.3
TMEM39A-204ENST00000468545 AXIN2Q9Y2T1 843 aa6.96□□□□□ -1.3
TMEM39A-204ENST00000468545 GNPATO15228 680 aa6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 PBX2P40425 430 aa6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 LSM11P83369 360 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 POTEEQ6S8J3 1075 aa6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 CERKQ8TCT0 537 aa6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 CCDC88BA6NC98 1476 aa6.95□□□□□ -1.3
TMEM39A-204ENST00000468545 PTPREP23469 700 aa6.94□□□□□ -1.3
TMEM39A-204ENST00000468545 NPDC1Q9NQX5 325 aaPredicted RBP6.94□□□□□ -1.3
TMEM39A-204ENST00000468545 MYT1LQ9UL68 1186 aa6.94□□□□□ -1.3
TMEM39A-204ENST00000468545 HMGXB3Q12766 1538 aa6.93□□□□□ -1.3
TMEM39A-204ENST00000468545 RNF166Q96A37 237 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-204ENST00000468545 PPP1R3GB7ZBB8 358 aa6.92□□□□□ -1.3
TMEM39A-204ENST00000468545 KCNH8Q96L42 1107 aa6.92□□□□□ -1.3
TMEM39A-204ENST00000468545 RBM27Q9P2N5 1060 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-204ENST00000468545 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
TMEM39A-204ENST00000468545 MAP2K5Q13163 448 aa6.91□□□□□ -1.3
TMEM39A-204ENST00000468545 KRI1Q8N9T8 703 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-204ENST00000468545 SLC24A3Q9HC58 644 aa6.91□□□□□ -1.3
TMEM39A-204ENST00000468545 KCNK17Q96T54 332 aa6.9□□□□□ -1.3
TMEM39A-204ENST00000468545 MINK1Q8N4C8 1332 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-204ENST00000468545 COL9A1P20849 921 aa6.89□□□□□ -1.31
TMEM39A-204ENST00000468545 FECHP22830 423 aa6.89□□□□□ -1.31
TMEM39A-204ENST00000468545 PSEN2P49810 448 aa6.89□□□□□ -1.31
TMEM39A-204ENST00000468545 PRSS12P56730 875 aa6.88□□□□□ -1.31
TMEM39A-204ENST00000468545 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
TMEM39A-204ENST00000468545 AK7Q96M32 723 aa6.88□□□□□ -1.31
TMEM39A-204ENST00000468545 IRF6O14896 467 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 ADGRD1Q6QNK2 874 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 TTC13Q8NBP0 860 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 CCDC102AQ96A19 550 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 CDCA7LQ96GN5 454 aa6.87□□□□□ -1.31
TMEM39A-204ENST00000468545 CADPSQ9ULU8 1353 aa6.84□□□□□ -1.31
TMEM39A-204ENST00000468545 TRIM6-TRIM34B2RNG4 842 aa6.84□□□□□ -1.31
TMEM39A-204ENST00000468545 ZBED2Q9BTP6 218 aa6.84□□□□□ -1.31
TMEM39A-204ENST00000468545 SLC4A5Q9BY07 1137 aa6.84□□□□□ -1.31
TMEM39A-204ENST00000468545 TSKSQ9UJT2 592 aa6.84□□□□□ -1.31
TMEM39A-204ENST00000468545 NESP48681 1621 aa6.83□□□□□ -1.32
TMEM39A-204ENST00000468545 TK2O00142 265 aa6.83□□□□□ -1.32
TMEM39A-204ENST00000468545 TRIM66O15016 1216 aa6.83□□□□□ -1.32
TMEM39A-204ENST00000468545 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-204ENST00000468545 ADGRG1Q9Y653 693 aa6.83□□□□□ -1.32
TMEM39A-204ENST00000468545 NBPF26B4DH59 902 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 OATP04181 439 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 AMHR2Q16671 573 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 PROX2Q3B8N5 592 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 PACS2Q86VP3 889 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 FAM198AQ9UFP1 575 aa6.82□□□□□ -1.32
TMEM39A-204ENST00000468545 METTL3Q86U44 580 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-204ENST00000468545 RBM46Q8TBY0 533 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-204ENST00000468545 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms