RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
BRCA1-208ENST00000468300 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
BRCA1-208ENST00000468300 FOXD1Q16676 465 aa12.11□□□□□ -0.47
BRCA1-208ENST00000468300 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
BRCA1-208ENST00000468300 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
BRCA1-208ENST00000468300 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
BRCA1-208ENST00000468300 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
BRCA1-208ENST00000468300 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
BRCA1-208ENST00000468300 DIP2CQ9Y2E4 1556 aa12.08□□□□□ -0.48
BRCA1-208ENST00000468300 NUP155O75694 1391 aa12.08□□□□□ -0.48
BRCA1-208ENST00000468300 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
BRCA1-208ENST00000468300 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
BRCA1-208ENST00000468300 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
BRCA1-208ENST00000468300 COL17A1Q9UMD9 1497 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-208ENST00000468300 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
BRCA1-208ENST00000468300 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
BRCA1-208ENST00000468300 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-208ENST00000468300 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
BRCA1-208ENST00000468300 RPRD2Q5VT52 1461 aaKnown RBP12.05□□□□□ -0.48
BRCA1-208ENST00000468300 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
BRCA1-208ENST00000468300 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
BRCA1-208ENST00000468300 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
BRCA1-208ENST00000468300 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
BRCA1-208ENST00000468300 E9PCH4 1651 aa12.04□□□□□ -0.48
BRCA1-208ENST00000468300 A2MP01023 1474 aa12.04□□□□□ -0.48
BRCA1-208ENST00000468300 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
BRCA1-208ENST00000468300 PKD2Q13563 968 aa12.03□□□□□ -0.48
BRCA1-208ENST00000468300 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
BRCA1-208ENST00000468300 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
BRCA1-208ENST00000468300 TET3O43151 1660 aa12.01□□□□□ -0.49
BRCA1-208ENST00000468300 CEP152O94986 1710 aa12□□□□□ -0.49
BRCA1-208ENST00000468300 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
BRCA1-208ENST00000468300 ATP10AO60312 1499 aa11.99□□□□□ -0.49
BRCA1-208ENST00000468300 LMTK2Q8IWU2 1503 aa11.99□□□□□ -0.49
BRCA1-208ENST00000468300 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
BRCA1-208ENST00000468300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■□□ 18.6
BRCA1-208ENST00000468300 SPHKAPQ2M3C7 1700 aa11.97□□□□□ -0.49
BRCA1-208ENST00000468300 KIF3BO15066 747 aa11.96□□□□□ -0.49
BRCA1-208ENST00000468300 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
BRCA1-208ENST00000468300 TONSLQ96HA7 1378 aa11.96□□□□□ -0.5
BRCA1-208ENST00000468300 PTPRTO14522 1441 aa11.95□□□□□ -0.5
BRCA1-208ENST00000468300 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
BRCA1-208ENST00000468300 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
BRCA1-208ENST00000468300 L3MBTL2Q969R5 705 aa11.94□□□□□ -0.5
BRCA1-208ENST00000468300 ABCC3O15438 1527 aa11.94□□□□□ -0.5
BRCA1-208ENST00000468300 TRPM2O94759 1503 aa11.94□□□□□ -0.5
BRCA1-208ENST00000468300 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
BRCA1-208ENST00000468300 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
BRCA1-208ENST00000468300 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
BRCA1-208ENST00000468300 AGLP35573 1532 aa11.93□□□□□ -0.5
BRCA1-208ENST00000468300 ZC3H13Q5T200 1668 aaKnown RBP11.92□□□□□ -0.5
BRCA1-208ENST00000468300 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-208ENST00000468300 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
BRCA1-208ENST00000468300 NPATQ14207 1427 aa11.89□□□□□ -0.51
BRCA1-208ENST00000468300 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
BRCA1-208ENST00000468300 KANK1Q14678 1352 aa11.89□□□□□ -0.51
BRCA1-208ENST00000468300 UGGT1Q9NYU2 1555 aa11.89□□□□□ -0.51
BRCA1-208ENST00000468300 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
BRCA1-208ENST00000468300 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
BRCA1-208ENST00000468300 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
BRCA1-208ENST00000468300 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
BRCA1-208ENST00000468300 SYNMO15061 1565 aa11.87□□□□□ -0.51
BRCA1-208ENST00000468300 PIK3C2BO00750 1634 aa11.87□□□□□ -0.51
BRCA1-208ENST00000468300 GGT6Q6P531 493 aa11.86□□□□□ -0.51
BRCA1-208ENST00000468300 ARHGAP31Q2M1Z3 1444 aa11.86□□□□□ -0.51
BRCA1-208ENST00000468300 IFT172Q9UG01 1749 aa11.85□□□□□ -0.51
BRCA1-208ENST00000468300 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
BRCA1-208ENST00000468300 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
BRCA1-208ENST00000468300 NOS1P29475 1434 aa11.85□□□□□ -0.51
BRCA1-208ENST00000468300 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
BRCA1-208ENST00000468300 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
BRCA1-208ENST00000468300 PREX1Q8TCU6 1659 aa11.84□□□□□ -0.51
BRCA1-208ENST00000468300 KIF1BO60333 1816 aa11.83□□□□□ -0.52
BRCA1-208ENST00000468300 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
BRCA1-208ENST00000468300 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-208ENST00000468300 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
BRCA1-208ENST00000468300 PRAG1Q86YV5 1406 aa11.82□□□□□ -0.52
BRCA1-208ENST00000468300 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
BRCA1-208ENST00000468300 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
BRCA1-208ENST00000468300 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
BRCA1-208ENST00000468300 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
BRCA1-208ENST00000468300 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-208ENST00000468300 PPLO60437 1756 aa11.78□□□□□ -0.52
BRCA1-208ENST00000468300 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
BRCA1-208ENST00000468300 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.52
BRCA1-208ENST00000468300 RGL3Q3MIN7 710 aa11.77□□□□□ -0.52
BRCA1-208ENST00000468300 LAMC1P11047 1609 aa11.77□□□□□ -0.53
BRCA1-208ENST00000468300 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
BRCA1-208ENST00000468300 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.53
BRCA1-208ENST00000468300 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
BRCA1-208ENST00000468300 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
BRCA1-208ENST00000468300 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-208ENST00000468300 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
BRCA1-208ENST00000468300 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
BRCA1-208ENST00000468300 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
BRCA1-208ENST00000468300 MYOM2P54296 1465 aa11.75□□□□□ -0.53
BRCA1-208ENST00000468300 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-208ENST00000468300 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
BRCA1-208ENST00000468300 GPRASP1Q5JY77 1395 aa11.74□□□□□ -0.53
BRCA1-208ENST00000468300 NEXMIFQ5QGS0 1516 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms