RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 VPS9D1Q9Y2B5 631 aa15.1■□□□□ 0.01
SSB-207ENST00000465871 ZBED2Q9BTP6 218 aa15.09■□□□□ 0.01
SSB-207ENST00000465871 PPP1R3GB7ZBB8 358 aa15.08■□□□□ 0
SSB-207ENST00000465871 NBR1Q14596 966 aa15.06■□□□□ 0
SSB-207ENST00000465871 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
SSB-207ENST00000465871 C6orf132Q5T0Z8 1188 aa15.03■□□□□ -0
SSB-207ENST00000465871 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
SSB-207ENST00000465871 COL9A1P20849 921 aa15.02■□□□□ -0
SSB-207ENST00000465871 EN1Q05925 392 aaPredicted RBP15.02■□□□□ -0
SSB-207ENST00000465871 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
SSB-207ENST00000465871 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
SSB-207ENST00000465871 P3H3Q8IVL6 736 aa15□□□□□ -0.01
SSB-207ENST00000465871 GRXCR2A6NFK2 248 aa14.99□□□□□ -0.01
SSB-207ENST00000465871 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
SSB-207ENST00000465871 BHMG1C9JSJ3 638 aaPredicted RBP14.97□□□□□ -0.01
SSB-207ENST00000465871 MAP3K7O43318 606 aa14.97□□□□□ -0.01
SSB-207ENST00000465871 PROX2Q3B8N5 592 aa14.95□□□□□ -0.02
SSB-207ENST00000465871 TSR1Q2NL82 804 aaKnown RBP14.94□□□□□ -0.02
SSB-207ENST00000465871 NBPF3Q9H094 633 aa14.94□□□□□ -0.02
SSB-207ENST00000465871 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
SSB-207ENST00000465871 PRIM1P49642 420 aaKnown RBP14.92□□□□□ -0.02
SSB-207ENST00000465871 OSBPP22059 807 aa14.91□□□□□ -0.02
SSB-207ENST00000465871 MRPL50Q8N5N7 158 aaKnown RBP14.91□□□□□ -0.02
SSB-207ENST00000465871 KCTD12Q96CX2 325 aaKnown RBP14.89□□□□□ -0.03
SSB-207ENST00000465871 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
SSB-207ENST00000465871 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
SSB-207ENST00000465871 HCSTQ9UBK5 93 aa14.87□□□□□ -0.03
SSB-207ENST00000465871 GOLGA8CPA6NN73 597 aa14.84□□□□□ -0.03
SSB-207ENST00000465871 MLLT3P42568 568 aaPredicted RBP14.84□□□□□ -0.03
SSB-207ENST00000465871 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
SSB-207ENST00000465871 KIAA1468Q9P260 1216 aa14.84□□□□□ -0.03
SSB-207ENST00000465871 CDHR5Q9HBB8 845 aa14.82□□□□□ -0.04
SSB-207ENST00000465871 LAPTM4BQ86VI4 370 aa14.81□□□□□ -0.04
SSB-207ENST00000465871 WNT2BQ93097 391 aa14.81□□□□□ -0.04
SSB-207ENST00000465871 KDM2AQ9Y2K7 1162 aa14.8□□□□□ -0.04
SSB-207ENST00000465871 CDCA7LQ96GN5 454 aa14.79□□□□□ -0.04
SSB-207ENST00000465871 TSKSQ9UJT2 592 aa14.79□□□□□ -0.04
SSB-207ENST00000465871 PRSS12P56730 875 aa14.78□□□□□ -0.04
SSB-207ENST00000465871 THSD4Q6ZMP0 1018 aa14.78□□□□□ -0.04
SSB-207ENST00000465871 SEPT9Q9UHD8 586 aaPredicted RBP14.77□□□□□ -0.05
SSB-207ENST00000465871 PACS2Q86VP3 889 aa14.76□□□□□ -0.05
SSB-207ENST00000465871 SEMA3EO15041 775 aa14.75□□□□□ -0.05
SSB-207ENST00000465871 ANKK1Q8NFD2 765 aa14.75□□□□□ -0.05
SSB-207ENST00000465871 RBM27Q9P2N5 1060 aaKnown RBP14.75□□□□□ -0.05
SSB-207ENST00000465871 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
SSB-207ENST00000465871 PTPN5P54829 565 aa14.73□□□□□ -0.05
SSB-207ENST00000465871 FAM98CQ17RN3 349 aaKnown RBP14.73□□□□□ -0.05
SSB-207ENST00000465871 ZFRQ96KR1 1074 aaKnown RBP14.72□□□□□ -0.05
SSB-207ENST00000465871 NPDC1Q9NQX5 325 aaPredicted RBP14.72□□□□□ -0.05
SSB-207ENST00000465871 FAM198AQ9UFP1 575 aa14.72□□□□□ -0.05
SSB-207ENST00000465871 NBPF26B4DH59 902 aa14.68□□□□□ -0.06
SSB-207ENST00000465871 TESPA1A2RU30 521 aaPredicted RBP14.66□□□□□ -0.06
SSB-207ENST00000465871 SOWAHBA6NEL2 793 aa14.66□□□□□ -0.06
SSB-207ENST00000465871 BCAMP50895 628 aa14.65□□□□□ -0.06
SSB-207ENST00000465871 PADI6Q6TGC4 694 aa14.65□□□□□ -0.06
SSB-207ENST00000465871 TTC13Q8NBP0 860 aa14.65□□□□□ -0.06
SSB-207ENST00000465871 TATDN2Q93075 761 aa14.64□□□□□ -0.07
SSB-207ENST00000465871 PNMA3Q9UL41 463 aa14.64□□□□□ -0.07
SSB-207ENST00000465871 C3orf80F5H4A9 247 aa14.63□□□□□ -0.07
SSB-207ENST00000465871 SMAPO00193 183 aa14.63□□□□□ -0.07
SSB-207ENST00000465871 PTGDRQ13258 359 aa14.63□□□□□ -0.07
SSB-207ENST00000465871 PLA2G2EQ9NZK7 142 aa14.63□□□□□ -0.07
SSB-207ENST00000465871 NUTM2FA1L443 756 aa14.61□□□□□ -0.07
SSB-207ENST00000465871 LRCH3Q96II8 777 aa14.61□□□□□ -0.07
SSB-207ENST00000465871 SMYD5Q6GMV2 418 aa14.6□□□□□ -0.07
SSB-207ENST00000465871 NUDT18Q6ZVK8 323 aa14.6□□□□□ -0.07
SSB-207ENST00000465871 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.6□□□□□ -0.07
SSB-207ENST00000465871 NYAP1Q6ZVC0 841 aa14.55□□□□□ -0.08
SSB-207ENST00000465871 FCHSD2O94868 740 aa14.54□□□□□ -0.08
SSB-207ENST00000465871 RBM26Q5T8P6 1007 aaKnown RBP14.54□□□□□ -0.08
SSB-207ENST00000465871 SAMD7Q7Z3H4 446 aa14.54□□□□□ -0.08
SSB-207ENST00000465871 WBP1LQ9NX94 342 aa14.54□□□□□ -0.08
SSB-207ENST00000465871 TSR3Q9UJK0 312 aaKnown RBP14.54□□□□□ -0.08
SSB-207ENST00000465871 HPS5Q9UPZ3 1129 aa14.54□□□□□ -0.08
SSB-207ENST00000465871 EYA1Q99502 592 aa14.49□□□□□ -0.09
SSB-207ENST00000465871 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
SSB-207ENST00000465871 HIC1Q14526 733 aa14.47□□□□□ -0.09
SSB-207ENST00000465871 IFFO2Q5TF58 517 aa14.46□□□□□ -0.09
SSB-207ENST00000465871 ADGRG1Q9Y653 693 aa14.46□□□□□ -0.09
SSB-207ENST00000465871 PPP4CP60510 307 aa14.45□□□□□ -0.1
SSB-207ENST00000465871 RBM46Q8TBY0 533 aaKnown RBP14.44□□□□□ -0.1
SSB-207ENST00000465871 GPR37O15354 613 aa14.43□□□□□ -0.1
SSB-207ENST00000465871 RNF40O75150 1001 aa14.43□□□□□ -0.1
SSB-207ENST00000465871 ITGBL1O95965 494 aaPredicted RBP14.43□□□□□ -0.1
SSB-207ENST00000465871 SWT1Q5T5J6 900 aaKnown RBP14.43□□□□□ -0.1
SSB-207ENST00000465871 DNAJB2P25686 324 aa14.4□□□□□ -0.1
SSB-207ENST00000465871 SLF2Q8IX21 1173 aa14.4□□□□□ -0.1
SSB-207ENST00000465871 GNPATO15228 680 aa14.39□□□□□ -0.11
SSB-207ENST00000465871 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
SSB-207ENST00000465871 GPIHBP1Q8IV16 184 aa14.39□□□□□ -0.11
SSB-207ENST00000465871 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
SSB-207ENST00000465871 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
SSB-207ENST00000465871 SLC4A3P48751 1232 aa14.37□□□□□ -0.11
SSB-207ENST00000465871 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
SSB-207ENST00000465871 FECHP22830 423 aa14.35□□□□□ -0.11
SSB-207ENST00000465871 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
SSB-207ENST00000465871 OATP04181 439 aa14.34□□□□□ -0.11
SSB-207ENST00000465871 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
SSB-207ENST00000465871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.32□□□□□ -0.12
SSB-207ENST00000465871 A0A0G2JS52 829 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms