RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 DAPK1P53355 1430 aa17.3■□□□□ 0.36
TMCO1-204ENST00000465705 SHANK2Q9UPX8 1470 aa17.3■□□□□ 0.36
TMCO1-204ENST00000465705 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
TMCO1-204ENST00000465705 MAST1Q9Y2H9 1570 aa17.29■□□□□ 0.36
TMCO1-204ENST00000465705 ABCC5O15440 1437 aa17.29■□□□□ 0.36
TMCO1-204ENST00000465705 ARID4BQ4LE39 1312 aaPredicted RBP17.28■□□□□ 0.36
TMCO1-204ENST00000465705 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
TMCO1-204ENST00000465705 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
TMCO1-204ENST00000465705 SIGLEC1Q9BZZ2 1709 aa17.26■□□□□ 0.35
TMCO1-204ENST00000465705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMCO1-204ENST00000465705 A2MP01023 1474 aa17.25■□□□□ 0.35
TMCO1-204ENST00000465705 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
TMCO1-204ENST00000465705 AGLP35573 1532 aa17.22■□□□□ 0.35
TMCO1-204ENST00000465705 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
TMCO1-204ENST00000465705 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
TMCO1-204ENST00000465705 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
TMCO1-204ENST00000465705 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
TMCO1-204ENST00000465705 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
TMCO1-204ENST00000465705 KIF15Q9NS87 1388 aa17.18■□□□□ 0.34
TMCO1-204ENST00000465705 ITGAEP38570 1179 aa17.18■□□□□ 0.34
TMCO1-204ENST00000465705 MLECQ14165 292 aa17.18■□□□□ 0.34
TMCO1-204ENST00000465705 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
TMCO1-204ENST00000465705 ADAMTSL3P82987 1691 aa17.16■□□□□ 0.34
TMCO1-204ENST00000465705 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
TMCO1-204ENST00000465705 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
TMCO1-204ENST00000465705 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
TMCO1-204ENST00000465705 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
TMCO1-204ENST00000465705 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
TMCO1-204ENST00000465705 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
TMCO1-204ENST00000465705 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
TMCO1-204ENST00000465705 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
TMCO1-204ENST00000465705 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
TMCO1-204ENST00000465705 KIF3BO15066 747 aa17.12■□□□□ 0.33
TMCO1-204ENST00000465705 POLA2Q14181 598 aa17.11■□□□□ 0.33
TMCO1-204ENST00000465705 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
TMCO1-204ENST00000465705 GGT6Q6P531 493 aa17.09■□□□□ 0.33
TMCO1-204ENST00000465705 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
TMCO1-204ENST00000465705 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
TMCO1-204ENST00000465705 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
TMCO1-204ENST00000465705 PTPRMP28827 1452 aa17.06■□□□□ 0.32
TMCO1-204ENST00000465705 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
TMCO1-204ENST00000465705 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
TMCO1-204ENST00000465705 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
TMCO1-204ENST00000465705 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
TMCO1-204ENST00000465705 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
TMCO1-204ENST00000465705 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
TMCO1-204ENST00000465705 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
TMCO1-204ENST00000465705 MROH1Q8NDA8 1641 aa17.03■□□□□ 0.32
TMCO1-204ENST00000465705 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
TMCO1-204ENST00000465705 MROH2AA6NES4 1674 aa17.02■□□□□ 0.32
TMCO1-204ENST00000465705 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
TMCO1-204ENST00000465705 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
TMCO1-204ENST00000465705 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
TMCO1-204ENST00000465705 NAIPQ13075 1403 aa17■□□□□ 0.31
TMCO1-204ENST00000465705 ABCC3O15438 1527 aa16.99■□□□□ 0.31
TMCO1-204ENST00000465705 KANK1Q14678 1352 aa16.99■□□□□ 0.31
TMCO1-204ENST00000465705 C3P01024 1663 aa16.98■□□□□ 0.31
TMCO1-204ENST00000465705 UNC13BO14795 1591 aa16.98■□□□□ 0.31
TMCO1-204ENST00000465705 CEP152O94986 1710 aa16.97■□□□□ 0.31
TMCO1-204ENST00000465705 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
TMCO1-204ENST00000465705 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
TMCO1-204ENST00000465705 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
TMCO1-204ENST00000465705 CAMSAP1Q5T5Y3 1602 aa16.94■□□□□ 0.3
TMCO1-204ENST00000465705 PZPP20742 1482 aa16.93■□□□□ 0.3
TMCO1-204ENST00000465705 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
TMCO1-204ENST00000465705 NPATQ14207 1427 aa16.9■□□□□ 0.3
TMCO1-204ENST00000465705 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
TMCO1-204ENST00000465705 NUP155O75694 1391 aa16.89■□□□□ 0.3
TMCO1-204ENST00000465705 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
TMCO1-204ENST00000465705 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
TMCO1-204ENST00000465705 TET3O43151 1660 aa16.88■□□□□ 0.29
TMCO1-204ENST00000465705 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
TMCO1-204ENST00000465705 PREX1Q8TCU6 1659 aa16.87■□□□□ 0.29
TMCO1-204ENST00000465705 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
TMCO1-204ENST00000465705 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
TMCO1-204ENST00000465705 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
TMCO1-204ENST00000465705 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-204ENST00000465705 FBXO31Q5XUX0 539 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-204ENST00000465705 RAB3GAP2Q9H2M9 1393 aa16.84■□□□□ 0.29
TMCO1-204ENST00000465705 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
TMCO1-204ENST00000465705 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
TMCO1-204ENST00000465705 MYO3AQ8NEV4 1616 aa16.84■□□□□ 0.29
TMCO1-204ENST00000465705 TNRQ92752 1358 aa16.83■□□□□ 0.28
TMCO1-204ENST00000465705 LMTK3Q96Q04 1460 aa16.82■□□□□ 0.28
TMCO1-204ENST00000465705 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
TMCO1-204ENST00000465705 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
TMCO1-204ENST00000465705 E9PCH4 1651 aa16.81■□□□□ 0.28
TMCO1-204ENST00000465705 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
TMCO1-204ENST00000465705 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
TMCO1-204ENST00000465705 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
TMCO1-204ENST00000465705 NLRP1Q9C000 1473 aa16.78■□□□□ 0.28
TMCO1-204ENST00000465705 NOS1P29475 1434 aa16.77■□□□□ 0.27
TMCO1-204ENST00000465705 A2ML1A8K2U0 1454 aa16.76■□□□□ 0.27
TMCO1-204ENST00000465705 SYNMO15061 1565 aa16.76■□□□□ 0.27
TMCO1-204ENST00000465705 HRCP23327 699 aa16.73■□□□□ 0.27
TMCO1-204ENST00000465705 PKD2Q13563 968 aa16.73■□□□□ 0.27
TMCO1-204ENST00000465705 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
TMCO1-204ENST00000465705 HSPA2P54652 639 aa16.72■□□□□ 0.27
TMCO1-204ENST00000465705 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
TMCO1-204ENST00000465705 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms