RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
SEC61A1-203ENST00000464451 AGLP35573 1532 aa17.49■□□□□ 0.39
SEC61A1-203ENST00000464451 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
SEC61A1-203ENST00000464451 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
SEC61A1-203ENST00000464451 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
SEC61A1-203ENST00000464451 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
SEC61A1-203ENST00000464451 MIER1Q8N108 512 aa17.46■□□□□ 0.38
SEC61A1-203ENST00000464451 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
SEC61A1-203ENST00000464451 DUOX2Q9NRD8 1548 aa17.45■□□□□ 0.38
SEC61A1-203ENST00000464451 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
SEC61A1-203ENST00000464451 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
SEC61A1-203ENST00000464451 HFM1A2PYH4 1435 aa17.44■□□□□ 0.38
SEC61A1-203ENST00000464451 ESF1Q9H501 851 aaKnown RBP17.44■□□□□ 0.38
SEC61A1-203ENST00000464451 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
SEC61A1-203ENST00000464451 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
SEC61A1-203ENST00000464451 CEBPAP49715 358 aaPredicted RBP17.42■□□□□ 0.38
SEC61A1-203ENST00000464451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.385e-7■□□□□ 10.1
SEC61A1-203ENST00000464451 PTPRMP28827 1452 aa17.41■□□□□ 0.38
SEC61A1-203ENST00000464451 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
SEC61A1-203ENST00000464451 ERBINQ96RT1 1412 aa17.39■□□□□ 0.37
SEC61A1-203ENST00000464451 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
SEC61A1-203ENST00000464451 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
SEC61A1-203ENST00000464451 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
SEC61A1-203ENST00000464451 CLTCQ00610 1675 aaKnown RBP17.37■□□□□ 0.37
SEC61A1-203ENST00000464451 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
SEC61A1-203ENST00000464451 NAIPQ13075 1403 aa17.36■□□□□ 0.37
SEC61A1-203ENST00000464451 MROH1Q8NDA8 1641 aa17.33■□□□□ 0.37
SEC61A1-203ENST00000464451 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.37
SEC61A1-203ENST00000464451 ZMYM3Q14202 1370 aa17.33■□□□□ 0.37
SEC61A1-203ENST00000464451 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
SEC61A1-203ENST00000464451 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SEC61A1-203ENST00000464451 C3P01024 1663 aa17.31■□□□□ 0.36
SEC61A1-203ENST00000464451 KDM5DQ9BY66 1539 aa17.31■□□□□ 0.36
SEC61A1-203ENST00000464451 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
SEC61A1-203ENST00000464451 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
SEC61A1-203ENST00000464451 CEP152O94986 1710 aa17.28■□□□□ 0.36
SEC61A1-203ENST00000464451 ABCC3O15438 1527 aa17.28■□□□□ 0.36
SEC61A1-203ENST00000464451 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
SEC61A1-203ENST00000464451 FBXO31Q5XUX0 539 aaPredicted RBP17.28■□□□□ 0.36
SEC61A1-203ENST00000464451 KANK1Q14678 1352 aa17.28■□□□□ 0.36
SEC61A1-203ENST00000464451 MROH2AA6NES4 1674 aa17.27■□□□□ 0.35
SEC61A1-203ENST00000464451 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.35
SEC61A1-203ENST00000464451 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
SEC61A1-203ENST00000464451 NUP155O75694 1391 aa17.24■□□□□ 0.35
SEC61A1-203ENST00000464451 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
SEC61A1-203ENST00000464451 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
SEC61A1-203ENST00000464451 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
SEC61A1-203ENST00000464451 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
SEC61A1-203ENST00000464451 UNC13BO14795 1591 aa17.23■□□□□ 0.35
SEC61A1-203ENST00000464451 CAMSAP1Q5T5Y3 1602 aa17.23■□□□□ 0.35
SEC61A1-203ENST00000464451 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
SEC61A1-203ENST00000464451 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
SEC61A1-203ENST00000464451 PZPP20742 1482 aa17.2■□□□□ 0.34
SEC61A1-203ENST00000464451 HSPA2P54652 639 aa17.19■□□□□ 0.34
SEC61A1-203ENST00000464451 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
SEC61A1-203ENST00000464451 NPATQ14207 1427 aa17.18■□□□□ 0.34
SEC61A1-203ENST00000464451 LMTK2Q8IWU2 1503 aa17.17■□□□□ 0.34
SEC61A1-203ENST00000464451 LMTK3Q96Q04 1460 aa17.16■□□□□ 0.34
SEC61A1-203ENST00000464451 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
SEC61A1-203ENST00000464451 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
SEC61A1-203ENST00000464451 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
SEC61A1-203ENST00000464451 TNRQ92752 1358 aa17.16■□□□□ 0.34
SEC61A1-203ENST00000464451 PREX1Q8TCU6 1659 aa17.15■□□□□ 0.34
SEC61A1-203ENST00000464451 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
SEC61A1-203ENST00000464451 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
SEC61A1-203ENST00000464451 TET3O43151 1660 aa17.14■□□□□ 0.33
SEC61A1-203ENST00000464451 MYO3AQ8NEV4 1616 aa17.13■□□□□ 0.33
SEC61A1-203ENST00000464451 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
SEC61A1-203ENST00000464451 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
SEC61A1-203ENST00000464451 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
SEC61A1-203ENST00000464451 E9PCH4 1651 aa17.11■□□□□ 0.33
SEC61A1-203ENST00000464451 FOXD1Q16676 465 aa17.1■□□□□ 0.33
SEC61A1-203ENST00000464451 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
SEC61A1-203ENST00000464451 PKD2Q13563 968 aa17.1■□□□□ 0.33
SEC61A1-203ENST00000464451 CEP170BQ9Y4F5 1589 aaPredicted RBP17.08■□□□□ 0.32
SEC61A1-203ENST00000464451 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
SEC61A1-203ENST00000464451 SYNMO15061 1565 aa17.07■□□□□ 0.32
SEC61A1-203ENST00000464451 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
SEC61A1-203ENST00000464451 IDI1Q13907 227 aa17.06■□□□□ 0.32
SEC61A1-203ENST00000464451 NOS1P29475 1434 aa17.06■□□□□ 0.32
SEC61A1-203ENST00000464451 UGGT1Q9NYU2 1555 aa17.05■□□□□ 0.32
SEC61A1-203ENST00000464451 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
SEC61A1-203ENST00000464451 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
SEC61A1-203ENST00000464451 ZNF142P52746 1687 aaPredicted RBP17.03■□□□□ 0.32
SEC61A1-203ENST00000464451 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
SEC61A1-203ENST00000464451 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
SEC61A1-203ENST00000464451 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
SEC61A1-203ENST00000464451 PIK3C2BO00750 1634 aa17.02■□□□□ 0.32
SEC61A1-203ENST00000464451 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
SEC61A1-203ENST00000464451 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
SEC61A1-203ENST00000464451 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
SEC61A1-203ENST00000464451 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
SEC61A1-203ENST00000464451 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
SEC61A1-203ENST00000464451 PLA2R1Q13018 1463 aa16.98■□□□□ 0.31
SEC61A1-203ENST00000464451 PTPRTO14522 1441 aa16.98■□□□□ 0.31
SEC61A1-203ENST00000464451 UBR1Q8IWV7 1749 aa16.98■□□□□ 0.31
SEC61A1-203ENST00000464451 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
SEC61A1-203ENST00000464451 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
SEC61A1-203ENST00000464451 STRCQ7RTU9 1775 aa16.96■□□□□ 0.31
SEC61A1-203ENST00000464451 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms