RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 ZMYM4Q5VZL5 1548 aa22.56■■□□□ 1.2
GYPC-205ENST00000464053 A2MP01023 1474 aa22.56■■□□□ 1.2
GYPC-205ENST00000464053 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
GYPC-205ENST00000464053 DIP2CQ9Y2E4 1556 aa22.55■■□□□ 1.2
GYPC-205ENST00000464053 YEATS2Q9ULM3 1422 aa22.55■■□□□ 1.2
GYPC-205ENST00000464053 FAM135AQ9P2D6 1515 aa22.54■■□□□ 1.2
GYPC-205ENST00000464053 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
GYPC-205ENST00000464053 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
GYPC-205ENST00000464053 DEPDC5O75140 1603 aa22.52■■□□□ 1.2
GYPC-205ENST00000464053 IQGAP3Q86VI3 1631 aa22.52■■□□□ 1.2
GYPC-205ENST00000464053 PKD2Q13563 968 aa22.52■■□□□ 1.2
GYPC-205ENST00000464053 KIF3BO15066 747 aa22.51■■□□□ 1.19
GYPC-205ENST00000464053 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
GYPC-205ENST00000464053 MROH1Q8NDA8 1641 aa22.47■■□□□ 1.19
GYPC-205ENST00000464053 BCORL1Q5H9F3 1711 aa22.44■■□□□ 1.18
GYPC-205ENST00000464053 PRDM15P57071 1507 aaPredicted RBP22.44■■□□□ 1.18
GYPC-205ENST00000464053 RNF17Q9BXT8 1623 aaKnown RBP22.44■■□□□ 1.18
GYPC-205ENST00000464053 VWDEQ8N2E2 1590 aa22.43■■□□□ 1.18
GYPC-205ENST00000464053 ATP10AO60312 1499 aa22.41■■□□□ 1.18
GYPC-205ENST00000464053 KANK1Q14678 1352 aa22.39■■□□□ 1.17
GYPC-205ENST00000464053 GGT6Q6P531 493 aa22.38■■□□□ 1.17
GYPC-205ENST00000464053 ARHGEF40Q8TER5 1519 aa22.37■■□□□ 1.17
GYPC-205ENST00000464053 E9PCH4 1651 aa22.37■■□□□ 1.17
GYPC-205ENST00000464053 SIGLEC1Q9BZZ2 1709 aa22.36■■□□□ 1.17
GYPC-205ENST00000464053 TIMELESSQ9UNS1 1208 aa22.36■■□□□ 1.17
GYPC-205ENST00000464053 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
GYPC-205ENST00000464053 TET3O43151 1660 aa22.36■■□□□ 1.17
GYPC-205ENST00000464053 REREQ9P2R6 1566 aa22.36■■□□□ 1.17
GYPC-205ENST00000464053 CEP152O94986 1710 aa22.35■■□□□ 1.17
GYPC-205ENST00000464053 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
GYPC-205ENST00000464053 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
GYPC-205ENST00000464053 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
GYPC-205ENST00000464053 AGLP35573 1532 aa22.3■■□□□ 1.16
GYPC-205ENST00000464053 EFCAB6Q5THR3 1501 aa22.29■■□□□ 1.16
GYPC-205ENST00000464053 ABCC3O15438 1527 aa22.28■■□□□ 1.16
GYPC-205ENST00000464053 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
GYPC-205ENST00000464053 WASHC2CQ9Y4E1 1318 aa22.27■■□□□ 1.16
GYPC-205ENST00000464053 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
GYPC-205ENST00000464053 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
GYPC-205ENST00000464053 CCDC144AA2RUR9 1427 aa22.24■■□□□ 1.15
GYPC-205ENST00000464053 PTPRTO14522 1441 aa22.23■■□□□ 1.15
GYPC-205ENST00000464053 CAMSAP1Q5T5Y3 1602 aa22.23■■□□□ 1.15
GYPC-205ENST00000464053 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
GYPC-205ENST00000464053 TRPM2O94759 1503 aa22.21■■□□□ 1.15
GYPC-205ENST00000464053 NPATQ14207 1427 aa22.2■■□□□ 1.14
GYPC-205ENST00000464053 CFAP65Q6ZU64 1925 aaKnown RBP22.2■■□□□ 1.14
GYPC-205ENST00000464053 MLECQ14165 292 aa22.2■■□□□ 1.14
GYPC-205ENST00000464053 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
GYPC-205ENST00000464053 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
GYPC-205ENST00000464053 UGGT1Q9NYU2 1555 aa22.15■■□□□ 1.14
GYPC-205ENST00000464053 CLTCQ00610 1675 aaKnown RBP22.14■■□□□ 1.14
GYPC-205ENST00000464053 ARHGAP31Q2M1Z3 1444 aa22.14■■□□□ 1.13
GYPC-205ENST00000464053 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
GYPC-205ENST00000464053 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
GYPC-205ENST00000464053 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
GYPC-205ENST00000464053 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
GYPC-205ENST00000464053 NOS1P29475 1434 aa22.09■■□□□ 1.13
GYPC-205ENST00000464053 CNTLNQ9NXG0 1405 aa22.08■■□□□ 1.13
GYPC-205ENST00000464053 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.12
GYPC-205ENST00000464053 SYNMO15061 1565 aa22.07■■□□□ 1.12
GYPC-205ENST00000464053 PREX1Q8TCU6 1659 aa22.07■■□□□ 1.12
GYPC-205ENST00000464053 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
GYPC-205ENST00000464053 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
GYPC-205ENST00000464053 KIF1BO60333 1816 aa22.05■■□□□ 1.12
GYPC-205ENST00000464053 FBXO31Q5XUX0 539 aaPredicted RBP22.05■■□□□ 1.12
GYPC-205ENST00000464053 ZNF326Q5BKZ1 582 aaKnown RBP22.03■■□□□ 1.12
GYPC-205ENST00000464053 MROH2AA6NES4 1674 aa22.03■■□□□ 1.12
GYPC-205ENST00000464053 PIK3C2BO00750 1634 aa22.02■■□□□ 1.12
GYPC-205ENST00000464053 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
GYPC-205ENST00000464053 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.12
GYPC-205ENST00000464053 ZMYM3Q14202 1370 aa22.01■■□□□ 1.11
GYPC-205ENST00000464053 ERVK-7P63135 1459 aa22.01■■□□□ 1.11
GYPC-205ENST00000464053 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
GYPC-205ENST00000464053 ADGRB3O60242 1522 aa21.98■■□□□ 1.11
GYPC-205ENST00000464053 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
GYPC-205ENST00000464053 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
GYPC-205ENST00000464053 IDI1Q13907 227 aa21.96■■□□□ 1.11
GYPC-205ENST00000464053 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
GYPC-205ENST00000464053 FER1L4A9Z1Z3 1794 aa21.95■■□□□ 1.1
GYPC-205ENST00000464053 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
GYPC-205ENST00000464053 SLC52A1Q9NWF4 448 aa21.94■■□□□ 1.1
GYPC-205ENST00000464053 IFT172Q9UG01 1749 aa21.93■■□□□ 1.1
GYPC-205ENST00000464053 RALGAPBQ86X10 1494 aa21.92■■□□□ 1.1
GYPC-205ENST00000464053 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
GYPC-205ENST00000464053 MYO5BQ9ULV0 1848 aa21.91■■□□□ 1.1
GYPC-205ENST00000464053 MADDQ8WXG6 1647 aa21.9■■□□□ 1.1
GYPC-205ENST00000464053 TMEM131LA2VDJ0 1609 aa21.89■■□□□ 1.1
GYPC-205ENST00000464053 C3P01024 1663 aa21.89■■□□□ 1.09
GYPC-205ENST00000464053 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.09
GYPC-205ENST00000464053 PPLO60437 1756 aa21.88■■□□□ 1.09
GYPC-205ENST00000464053 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
GYPC-205ENST00000464053 STAC3Q96MF2 364 aa21.86■■□□□ 1.09
GYPC-205ENST00000464053 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
GYPC-205ENST00000464053 MYOM2P54296 1465 aa21.86■■□□□ 1.09
GYPC-205ENST00000464053 NBPF1Q3BBV0 1214 aa21.85■■□□□ 1.09
GYPC-205ENST00000464053 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.092e-8■■■■■ 45.9
GYPC-205ENST00000464053 ROCK2O75116 1388 aaKnown RBP21.84■■□□□ 1.09
GYPC-205ENST00000464053 TNRQ92752 1358 aa21.84■■□□□ 1.09
GYPC-205ENST00000464053 ADAMTSL3P82987 1691 aa21.84■■□□□ 1.09
GYPC-205ENST00000464053 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms