RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 MAP3K9P80192 1104 aa10□□□□□ -0.81
KDM3A-208ENST00000463013 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
KDM3A-208ENST00000463013 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
KDM3A-208ENST00000463013 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
KDM3A-208ENST00000463013 LAPTM4AQ15012 233 aa9.99□□□□□ -0.81
KDM3A-208ENST00000463013 KCNC4Q03721 635 aa9.96□□□□□ -0.82
KDM3A-208ENST00000463013 FBXW7Q969H0 707 aa9.96□□□□□ -0.82
KDM3A-208ENST00000463013 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
KDM3A-208ENST00000463013 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
KDM3A-208ENST00000463013 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
KDM3A-208ENST00000463013 BCAMP50895 628 aa9.91□□□□□ -0.82
KDM3A-208ENST00000463013 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
KDM3A-208ENST00000463013 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
KDM3A-208ENST00000463013 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
KDM3A-208ENST00000463013 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
KDM3A-208ENST00000463013 PCDHGA10Q9Y5H3 936 aa9.9□□□□□ -0.82
KDM3A-208ENST00000463013 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
KDM3A-208ENST00000463013 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
KDM3A-208ENST00000463013 PHF14O94880 888 aa9.87□□□□□ -0.83
KDM3A-208ENST00000463013 WBP1LQ9NX94 342 aa9.86□□□□□ -0.83
KDM3A-208ENST00000463013 COL9A1P20849 921 aa9.85□□□□□ -0.83
KDM3A-208ENST00000463013 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
KDM3A-208ENST00000463013 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
KDM3A-208ENST00000463013 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
KDM3A-208ENST00000463013 EPAS1Q99814 870 aa9.84□□□□□ -0.83
KDM3A-208ENST00000463013 HAP1P54257 671 aaPredicted RBP9.83□□□□□ -0.84
KDM3A-208ENST00000463013 FAM98CQ17RN3 349 aaKnown RBP9.83□□□□□ -0.84
KDM3A-208ENST00000463013 TRAF7Q6Q0C0 670 aa9.83□□□□□ -0.84
KDM3A-208ENST00000463013 LRCH3Q96II8 777 aa9.83□□□□□ -0.84
KDM3A-208ENST00000463013 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
KDM3A-208ENST00000463013 GFRA3O60609 400 aa9.82□□□□□ -0.84
KDM3A-208ENST00000463013 MFSD10Q14728 455 aa9.82□□□□□ -0.84
KDM3A-208ENST00000463013 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
KDM3A-208ENST00000463013 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
KDM3A-208ENST00000463013 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
KDM3A-208ENST00000463013 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
KDM3A-208ENST00000463013 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
KDM3A-208ENST00000463013 PACS2Q86VP3 889 aa9.77□□□□□ -0.85
KDM3A-208ENST00000463013 PPP4CP60510 307 aa9.76□□□□□ -0.85
KDM3A-208ENST00000463013 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
KDM3A-208ENST00000463013 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
KDM3A-208ENST00000463013 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
KDM3A-208ENST00000463013 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
KDM3A-208ENST00000463013 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
KDM3A-208ENST00000463013 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
KDM3A-208ENST00000463013 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
KDM3A-208ENST00000463013 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
KDM3A-208ENST00000463013 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
KDM3A-208ENST00000463013 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
KDM3A-208ENST00000463013 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
KDM3A-208ENST00000463013 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
KDM3A-208ENST00000463013 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
KDM3A-208ENST00000463013 DPYSL4O14531 572 aa9.64□□□□□ -0.87
KDM3A-208ENST00000463013 GGCXP38435 758 aa9.64□□□□□ -0.87
KDM3A-208ENST00000463013 CERKQ8TCT0 537 aa9.64□□□□□ -0.87
KDM3A-208ENST00000463013 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
KDM3A-208ENST00000463013 LCE2BO14633 110 aa9.63□□□□□ -0.87
KDM3A-208ENST00000463013 MAP3K7O43318 606 aa9.63□□□□□ -0.87
KDM3A-208ENST00000463013 PPP1R18Q6NYC8 613 aa9.63□□□□□ -0.87
KDM3A-208ENST00000463013 DDX12PQ92771 950 aa9.63□□□□□ -0.87
KDM3A-208ENST00000463013 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
KDM3A-208ENST00000463013 MTRQ99707 1265 aa9.62□□□□□ -0.87
KDM3A-208ENST00000463013 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
KDM3A-208ENST00000463013 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
KDM3A-208ENST00000463013 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
KDM3A-208ENST00000463013 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
KDM3A-208ENST00000463013 E2F4Q16254 413 aa9.6□□□□□ -0.87
KDM3A-208ENST00000463013 NBR1Q14596 966 aa9.59□□□□□ -0.87
KDM3A-208ENST00000463013 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
KDM3A-208ENST00000463013 PRSS12P56730 875 aa9.58□□□□□ -0.88
KDM3A-208ENST00000463013 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
KDM3A-208ENST00000463013 SPDYE16A6NNV3 312 aaPredicted RBP9.57□□□□□ -0.88
KDM3A-208ENST00000463013 SLC4A3P48751 1232 aa9.56□□□□□ -0.88
KDM3A-208ENST00000463013 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
KDM3A-208ENST00000463013 P3H3Q8IVL6 736 aa9.55□□□□□ -0.88
KDM3A-208ENST00000463013 TATDN2Q93075 761 aa9.55□□□□□ -0.88
KDM3A-208ENST00000463013 TSR1Q2NL82 804 aaKnown RBP9.54□□□□□ -0.88
KDM3A-208ENST00000463013 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
KDM3A-208ENST00000463013 SMAPO00193 183 aa9.53□□□□□ -0.88
KDM3A-208ENST00000463013 RNF40O75150 1001 aa9.53□□□□□ -0.88
KDM3A-208ENST00000463013 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
KDM3A-208ENST00000463013 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
KDM3A-208ENST00000463013 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
KDM3A-208ENST00000463013 PDIA6Q15084 440 aa9.51□□□□□ -0.89
KDM3A-208ENST00000463013 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
KDM3A-208ENST00000463013 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
KDM3A-208ENST00000463013 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
KDM3A-208ENST00000463013 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
KDM3A-208ENST00000463013 APLP1P51693 650 aa9.48□□□□□ -0.89
KDM3A-208ENST00000463013 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
KDM3A-208ENST00000463013 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
KDM3A-208ENST00000463013 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
KDM3A-208ENST00000463013 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
KDM3A-208ENST00000463013 DGAT1O75907 488 aa9.45□□□□□ -0.9
KDM3A-208ENST00000463013 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
KDM3A-208ENST00000463013 ZPR1O75312 459 aa9.44□□□□□ -0.9
KDM3A-208ENST00000463013 SLC19A1P41440 591 aa9.43□□□□□ -0.9
KDM3A-208ENST00000463013 COPS2P61201 443 aa9.43□□□□□ -0.9
KDM3A-208ENST00000463013 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
KDM3A-208ENST00000463013 PRR20EP86478 221 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms