RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 ABCC1P33527 1531 aa13.77□□□□□ -0.21
GABRE-204ENST00000462018 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
GABRE-204ENST00000462018 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
GABRE-204ENST00000462018 MED14O60244 1454 aa13.75□□□□□ -0.21
GABRE-204ENST00000462018 CDC42BPBQ9Y5S2 1711 aa13.74□□□□□ -0.21
GABRE-204ENST00000462018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.212e-18■□□□□ 10.4
GABRE-204ENST00000462018 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
GABRE-204ENST00000462018 LRP6O75581 1613 aa13.72□□□□□ -0.21
GABRE-204ENST00000462018 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
GABRE-204ENST00000462018 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
GABRE-204ENST00000462018 ZC3H13Q5T200 1668 aaKnown RBP13.7□□□□□ -0.22
GABRE-204ENST00000462018 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
GABRE-204ENST00000462018 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
GABRE-204ENST00000462018 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
GABRE-204ENST00000462018 TNRQ92752 1358 aa13.68□□□□□ -0.22
GABRE-204ENST00000462018 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
GABRE-204ENST00000462018 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
GABRE-204ENST00000462018 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
GABRE-204ENST00000462018 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
GABRE-204ENST00000462018 JCADQ9P266 1359 aa13.63□□□□□ -0.23
GABRE-204ENST00000462018 GGT6Q6P531 493 aa13.63□□□□□ -0.23
GABRE-204ENST00000462018 RGS12O14924 1447 aa13.63□□□□□ -0.23
GABRE-204ENST00000462018 COL16A1Q07092 1604 aaPredicted RBP13.62□□□□□ -0.23
GABRE-204ENST00000462018 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
GABRE-204ENST00000462018 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
GABRE-204ENST00000462018 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
GABRE-204ENST00000462018 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
GABRE-204ENST00000462018 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
GABRE-204ENST00000462018 A2MP01023 1474 aa13.61□□□□□ -0.23
GABRE-204ENST00000462018 ATP7AQ04656 1500 aa13.61□□□□□ -0.23
GABRE-204ENST00000462018 RXRBP28702 533 aa13.61□□□□□ -0.23
GABRE-204ENST00000462018 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
GABRE-204ENST00000462018 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
GABRE-204ENST00000462018 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
GABRE-204ENST00000462018 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
GABRE-204ENST00000462018 PZPP20742 1482 aa13.59□□□□□ -0.23
GABRE-204ENST00000462018 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
GABRE-204ENST00000462018 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
GABRE-204ENST00000462018 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
GABRE-204ENST00000462018 NLRP1Q9C000 1473 aa13.57□□□□□ -0.24
GABRE-204ENST00000462018 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
GABRE-204ENST00000462018 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
GABRE-204ENST00000462018 CDC42BPAQ5VT25 1732 aa13.56□□□□□ -0.24
GABRE-204ENST00000462018 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
GABRE-204ENST00000462018 LRP5O75197 1615 aa13.56□□□□□ -0.24
GABRE-204ENST00000462018 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
GABRE-204ENST00000462018 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
GABRE-204ENST00000462018 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
GABRE-204ENST00000462018 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
GABRE-204ENST00000462018 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
GABRE-204ENST00000462018 CLIP1P30622 1438 aa13.54□□□□□ -0.24
GABRE-204ENST00000462018 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
GABRE-204ENST00000462018 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
GABRE-204ENST00000462018 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
GABRE-204ENST00000462018 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
GABRE-204ENST00000462018 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
GABRE-204ENST00000462018 NUTM2DQ5VT03 806 aaPredicted RBP13.51□□□□□ -0.25
GABRE-204ENST00000462018 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
GABRE-204ENST00000462018 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
GABRE-204ENST00000462018 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
GABRE-204ENST00000462018 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
GABRE-204ENST00000462018 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
GABRE-204ENST00000462018 EP400Q96L91 3159 aa13.49□□□□□ -0.25
GABRE-204ENST00000462018 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
GABRE-204ENST00000462018 AFF2P51816 1311 aa13.48□□□□□ -0.25
GABRE-204ENST00000462018 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
GABRE-204ENST00000462018 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
GABRE-204ENST00000462018 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
GABRE-204ENST00000462018 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
GABRE-204ENST00000462018 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
GABRE-204ENST00000462018 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
GABRE-204ENST00000462018 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
GABRE-204ENST00000462018 PRDM15P57071 1507 aaPredicted RBP13.43□□□□□ -0.26
GABRE-204ENST00000462018 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
GABRE-204ENST00000462018 LTKP29376 864 aa13.42□□□□□ -0.26
GABRE-204ENST00000462018 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
GABRE-204ENST00000462018 SLIT1O75093 1534 aa13.41□□□□□ -0.26
GABRE-204ENST00000462018 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
GABRE-204ENST00000462018 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
GABRE-204ENST00000462018 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
GABRE-204ENST00000462018 MSH6P52701 1360 aa13.39□□□□□ -0.27
GABRE-204ENST00000462018 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
GABRE-204ENST00000462018 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
GABRE-204ENST00000462018 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
GABRE-204ENST00000462018 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
GABRE-204ENST00000462018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.274e-13■■□□□ 12.7
GABRE-204ENST00000462018 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
GABRE-204ENST00000462018 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
GABRE-204ENST00000462018 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
GABRE-204ENST00000462018 YY1P25490 414 aa13.36□□□□□ -0.27
GABRE-204ENST00000462018 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
GABRE-204ENST00000462018 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
GABRE-204ENST00000462018 DHX29Q7Z478 1369 aaKnown RBP13.35□□□□□ -0.27
GABRE-204ENST00000462018 ABCC3O15438 1527 aa13.35□□□□□ -0.27
GABRE-204ENST00000462018 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
GABRE-204ENST00000462018 KIF3BO15066 747 aa13.35□□□□□ -0.27
GABRE-204ENST00000462018 KCNA6P17658 529 aa13.35□□□□□ -0.27
GABRE-204ENST00000462018 MAST1Q9Y2H9 1570 aa13.35□□□□□ -0.27
GABRE-204ENST00000462018 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
GABRE-204ENST00000462018 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms