RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 RALBP1Q15311 655 aa20.4■□□□□ 0.86
C9orf78-204ENST00000461762 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
C9orf78-204ENST00000461762 MYBBP1AQ9BQG0 1328 aaKnown RBP20.38■□□□□ 0.85
C9orf78-204ENST00000461762 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
C9orf78-204ENST00000461762 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
C9orf78-204ENST00000461762 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
C9orf78-204ENST00000461762 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
C9orf78-204ENST00000461762 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
C9orf78-204ENST00000461762 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
C9orf78-204ENST00000461762 E9PCH4 1651 aa20.32■□□□□ 0.84
C9orf78-204ENST00000461762 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
C9orf78-204ENST00000461762 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
C9orf78-204ENST00000461762 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
C9orf78-204ENST00000461762 GPRASP1Q5JY77 1395 aa20.29■□□□□ 0.84
C9orf78-204ENST00000461762 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
C9orf78-204ENST00000461762 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
C9orf78-204ENST00000461762 PARD3Q8TEW0 1356 aa20.29■□□□□ 0.84
C9orf78-204ENST00000461762 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
C9orf78-204ENST00000461762 PER1O15534 1290 aaPredicted RBP20.28■□□□□ 0.84
C9orf78-204ENST00000461762 CHD1O14646 1710 aa20.28■□□□□ 0.84
C9orf78-204ENST00000461762 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
C9orf78-204ENST00000461762 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
C9orf78-204ENST00000461762 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
C9orf78-204ENST00000461762 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
C9orf78-204ENST00000461762 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
C9orf78-204ENST00000461762 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
C9orf78-204ENST00000461762 UNC13BO14795 1591 aa20.23■□□□□ 0.83
C9orf78-204ENST00000461762 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
C9orf78-204ENST00000461762 A2MP01023 1474 aa20.22■□□□□ 0.83
C9orf78-204ENST00000461762 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
C9orf78-204ENST00000461762 PDE3BQ13370 1112 aa20.22■□□□□ 0.83
C9orf78-204ENST00000461762 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
C9orf78-204ENST00000461762 TESK2Q96S53 571 aa20.22■□□□□ 0.83
C9orf78-204ENST00000461762 SYCP2Q9BX26 1530 aa20.21■□□□□ 0.83
C9orf78-204ENST00000461762 ABCC2Q92887 1545 aa20.2■□□□□ 0.82
C9orf78-204ENST00000461762 LAMC1P11047 1609 aa20.19■□□□□ 0.82
C9orf78-204ENST00000461762 COL17A1Q9UMD9 1497 aaPredicted RBP20.19■□□□□ 0.82
C9orf78-204ENST00000461762 NOP58Q9Y2X3 529 aaKnown RBP20.19■□□□□ 0.82
C9orf78-204ENST00000461762 PLEKHH2Q8IVE3 1493 aa20.19■□□□□ 0.82
C9orf78-204ENST00000461762 INSRP06213 1382 aa20.19■□□□□ 0.82
C9orf78-204ENST00000461762 RCAN3Q9UKA8 241 aa20.19■□□□□ 0.82
C9orf78-204ENST00000461762 PRDM15P57071 1507 aaPredicted RBP20.18■□□□□ 0.82
C9orf78-204ENST00000461762 ATP10AO60312 1499 aa20.18■□□□□ 0.82
C9orf78-204ENST00000461762 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
C9orf78-204ENST00000461762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■■□□ 16.3
C9orf78-204ENST00000461762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.17■□□□□ 0.82
C9orf78-204ENST00000461762 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
C9orf78-204ENST00000461762 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
C9orf78-204ENST00000461762 TTC37Q6PGP7 1564 aa20.16■□□□□ 0.82
C9orf78-204ENST00000461762 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
C9orf78-204ENST00000461762 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
C9orf78-204ENST00000461762 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
C9orf78-204ENST00000461762 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
C9orf78-204ENST00000461762 ERBINQ96RT1 1412 aa20.14■□□□□ 0.81
C9orf78-204ENST00000461762 ZMYM4Q5VZL5 1548 aa20.13■□□□□ 0.81
C9orf78-204ENST00000461762 PANK3Q9H999 370 aa20.13■□□□□ 0.81
C9orf78-204ENST00000461762 MYO5CQ9NQX4 1742 aa20.12■□□□□ 0.81
C9orf78-204ENST00000461762 MAGI2Q86UL8 1455 aa20.12■□□□□ 0.81
C9orf78-204ENST00000461762 IPO9Q96P70 1041 aaKnown RBP20.12■□□□□ 0.81
C9orf78-204ENST00000461762 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
C9orf78-204ENST00000461762 DUOX2Q9NRD8 1548 aa20.11■□□□□ 0.81
C9orf78-204ENST00000461762 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
C9orf78-204ENST00000461762 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
C9orf78-204ENST00000461762 TMF1P82094 1093 aa20.1■□□□□ 0.81
C9orf78-204ENST00000461762 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
C9orf78-204ENST00000461762 CDCA7LQ96GN5 454 aa20.1■□□□□ 0.81
C9orf78-204ENST00000461762 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
C9orf78-204ENST00000461762 UHRF1BP1LA0JNW5 1464 aa20.09■□□□□ 0.81
C9orf78-204ENST00000461762 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
C9orf78-204ENST00000461762 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
C9orf78-204ENST00000461762 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
C9orf78-204ENST00000461762 PLCH2O75038 1416 aa20.04■□□□□ 0.8
C9orf78-204ENST00000461762 ZCCHC11Q5TAX3 1644 aaKnown RBP20.02■□□□□ 0.79
C9orf78-204ENST00000461762 RNF17Q9BXT8 1623 aaKnown RBP20.02■□□□□ 0.79
C9orf78-204ENST00000461762 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
C9orf78-204ENST00000461762 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
C9orf78-204ENST00000461762 MS4A1P11836 297 aa20.01■□□□□ 0.79
C9orf78-204ENST00000461762 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
C9orf78-204ENST00000461762 DEKP35659 375 aaKnown RBP19.99■□□□□ 0.79
C9orf78-204ENST00000461762 ARAP3Q8WWN8 1544 aa19.99■□□□□ 0.79
C9orf78-204ENST00000461762 PDE4AP27815 886 aa19.98■□□□□ 0.79
C9orf78-204ENST00000461762 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
C9orf78-204ENST00000461762 ABCC1P33527 1531 aa19.98■□□□□ 0.79
C9orf78-204ENST00000461762 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
C9orf78-204ENST00000461762 PLIN1O60240 522 aa19.97■□□□□ 0.79
C9orf78-204ENST00000461762 BACH2Q9BYV9 841 aa19.97■□□□□ 0.79
C9orf78-204ENST00000461762 STAC3Q96MF2 364 aa19.97■□□□□ 0.79
C9orf78-204ENST00000461762 NBR1Q14596 966 aa19.95■□□□□ 0.78
C9orf78-204ENST00000461762 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
C9orf78-204ENST00000461762 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
C9orf78-204ENST00000461762 MADDQ8WXG6 1647 aa19.94■□□□□ 0.78
C9orf78-204ENST00000461762 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
C9orf78-204ENST00000461762 PTPRTO14522 1441 aa19.94■□□□□ 0.78
C9orf78-204ENST00000461762 SCAPERQ9BY12 1400 aa19.94■□□□□ 0.78
C9orf78-204ENST00000461762 CRBNQ96SW2 442 aa19.94■□□□□ 0.78
C9orf78-204ENST00000461762 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
C9orf78-204ENST00000461762 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
C9orf78-204ENST00000461762 TRPM2O94759 1503 aa19.91■□□□□ 0.78
C9orf78-204ENST00000461762 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
C9orf78-204ENST00000461762 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms