RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
SNORD54-201ENST00000459159 CELSR1Q9NYQ6 3014 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 ZFHX4Q86UP3 3567 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 LAMA1P25391 3075 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 UTP20O75691 2785 aaKnown RBP-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 TEX15Q9BXT5 2789 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 RBMXP38159 391 aaKnown RBP-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 KRTAP6-1Q3LI64 71 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 LCE1AQ5T7P2 110 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 ZNF318Q5VUA4 2279 aa-0.3□□□□□ -2.46
SNORD54-201ENST00000459159 HECTD4Q9Y4D8 3996 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 FAT2Q9NYQ8 4349 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 CCDC194A0A1B0GVG4 234 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 KRTAP10-9P60411 292 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 KRTAP10-12P60413 245 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 GRIN2CQ14957 1233 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 TLN2Q9Y4G6 2542 aa-0.31□□□□□ -2.46
SNORD54-201ENST00000459159 C2CD3Q4AC94 2353 aa-0.32□□□□□ -2.46
SNORD54-201ENST00000459159 CNTNAP4Q9C0A0 1308 aa-0.32□□□□□ -2.46
SNORD54-201ENST00000459159 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
SNORD54-201ENST00000459159 PKD1L1Q8TDX9 2849 aa-0.32□□□□□ -2.46
SNORD54-201ENST00000459159 CNTRLQ7Z7A1 2325 aa-0.33□□□□□ -2.46
SNORD54-201ENST00000459159 COL10A1Q03692 680 aa-0.33□□□□□ -2.46
SNORD54-201ENST00000459159 U3KPZ7 1027 aaPredicted RBP-0.33□□□□□ -2.46
SNORD54-201ENST00000459159 RPS2P15880 293 aaKnown RBP-0.34□□□□□ -2.46
SNORD54-201ENST00000459159 MT4P47944 62 aa-0.34□□□□□ -2.46
SNORD54-201ENST00000459159 ALYREFQ86V81 257 aaKnown RBP-0.34□□□□□ -2.46
SNORD54-201ENST00000459159 SPRR2GQ9BYE4 73 aa-0.34□□□□□ -2.46
SNORD54-201ENST00000459159 MUC3AQ02505 3323 aa-0.35□□□□□ -2.46
SNORD54-201ENST00000459159 PCNX1Q96RV3 2341 aa-0.35□□□□□ -2.46
SNORD54-201ENST00000459159 KALRNO60229 2985 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 VASPP50552 380 aaPredicted RBP-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 KRTAP20-2Q3LI61 65 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 LCE2CQ5TA81 110 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 WFDC1Q9HC57 220 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 CACNA1EQ15878 2313 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 TACC2O95359 2948 aa-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 FN1P02751 2386 aaKnown RBP-0.35□□□□□ -2.47
SNORD54-201ENST00000459159 PITPNM2Q9BZ72 1349 aa-0.36□□□□□ -2.47
SNORD54-201ENST00000459159 SNRPBP14678 240 aaKnown RBP-0.36□□□□□ -2.47
SNORD54-201ENST00000459159 DNAH1Q9P2D7 4330 aa-0.36□□□□□ -2.47
SNORD54-201ENST00000459159 MYO7AQ13402 2215 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 EP400Q96L91 3159 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 ITGB7P26010 798 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 KRTAP10-5P60370 271 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 KRTAP19-6Q3LI70 58 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 GVINP1Q7Z2Y8 2422 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 LPAP08519 4548 aa-0.37□□□□□ -2.47
SNORD54-201ENST00000459159 BOD1L1Q8NFC6 3051 aa-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 KRT13P13646 458 aa-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 LCE3BQ5TA77 95 aa-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 CCER1Q8TC90 406 aaPredicted RBP-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 ALG13Q9NP73 1137 aaKnown RBP-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 EYSQ5T1H1 3165 aa-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 MTORP42345 2549 aa-0.38□□□□□ -2.47
SNORD54-201ENST00000459159 CNOT1A5YKK6 2376 aaKnown RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.471e-7■□□□□ 11.1
SNORD54-201ENST00000459159 DNAH7Q8WXX0 4024 aa-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 LCE2DQ5TA82 110 aaPredicted RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 LCE5AQ5TCM9 118 aa-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 ZNF579Q8NAF0 562 aaKnown RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 RBMXL1Q96E39 390 aaKnown RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 RBM27Q9P2N5 1060 aaKnown RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 WBP11Q9Y2W2 641 aaKnown RBP-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 REV3LO60673 3130 aa-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 NBEAQ8NFP9 2946 aa-0.39□□□□□ -2.47
SNORD54-201ENST00000459159 NBPF19A0A087WUL8 3843 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 ZFHX3Q15911 3703 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 ARID1AO14497 2285 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 RARAP10276 462 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 KRTAP10-6P60371 365 aaPredicted RBP-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 FAM98AQ8NCA5 519 aaKnown RBP-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 DMXL2Q8TDJ6 3036 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 FLGP20930 4061 aaPredicted RBP-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 CUBNO60494 3623 aa-0.4□□□□□ -2.47
SNORD54-201ENST00000459159 SPEGQ15772 3267 aa-0.41□□□□□ -2.47
SNORD54-201ENST00000459159 COL6A6A6NMZ7 2263 aa-0.41□□□□□ -2.47
SNORD54-201ENST00000459159 PKD1P98161 4303 aa-0.41□□□□□ -2.48
SNORD54-201ENST00000459159 SRCAPQ6ZRS2 3230 aa-0.41□□□□□ -2.48
SNORD54-201ENST00000459159 DYNC1H1Q14204 4646 aaKnown RBP-0.42□□□□□ -2.48
SNORD54-201ENST00000459159 KRTAP10-4P60372 401 aaPredicted RBP-0.42□□□□□ -2.48
SNORD54-201ENST00000459159 CD320Q9NPF0 282 aa-0.42□□□□□ -2.48
SNORD54-201ENST00000459159 ANK2Q01484 3957 aa-0.42□□□□□ -2.48
SNORD54-201ENST00000459159 CSMD3Q7Z407 3707 aa-0.42□□□□□ -2.48
SNORD54-201ENST00000459159 SPG11Q96JI7 2443 aa-0.43□□□□□ -2.48
SNORD54-201ENST00000459159 FAM186AA6NE01 2351 aa-0.43□□□□□ -2.48
SNORD54-201ENST00000459159 KRT9P35527 623 aa-0.43□□□□□ -2.48
SNORD54-201ENST00000459159 HNRNPA3P51991 378 aaKnown RBP-0.43□□□□□ -2.48
SNORD54-201ENST00000459159 SOX4Q06945 474 aaPredicted RBP-0.43□□□□□ -2.48
SNORD54-201ENST00000459159 CFAP54Q96N23 3096 aa-0.44□□□□□ -2.48
SNORD54-201ENST00000459159 NANOS1Q8WY41 292 aaKnown RBP-0.44□□□□□ -2.48
SNORD54-201ENST00000459159 FREM2Q5SZK8 3169 aa-0.44□□□□□ -2.48
SNORD54-201ENST00000459159 BRWD1Q9NSI6 2320 aa-0.44□□□□□ -2.48
SNORD54-201ENST00000459159 SPTBN2O15020 2390 aa-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 MGAQ8IWI9 3026 aa-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 COL23A1Q86Y22 540 aaPredicted RBP-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 SGPP1Q9BX95 441 aa-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 TAOK2Q9UL54 1235 aa-0.45□□□□□ -2.48
SNORD54-201ENST00000459159 MKI67P46013 3256 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms