RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 KCNH8Q96L42 1107 aa7.33□□□□□ -1.24
SCARNA18-201ENST00000459004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.24
SCARNA18-201ENST00000459004 RBM26Q5T8P6 1007 aaKnown RBP7.31□□□□□ -1.24
SCARNA18-201ENST00000459004 POTEEQ6S8J3 1075 aa7.31□□□□□ -1.24
SCARNA18-201ENST00000459004 CDAN1Q8IWY9 1227 aa7.31□□□□□ -1.24
SCARNA18-201ENST00000459004 TSR1Q2NL82 804 aaKnown RBP7.3□□□□□ -1.24
SCARNA18-201ENST00000459004 KCNK17Q96T54 332 aa7.3□□□□□ -1.24
SCARNA18-201ENST00000459004 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
SCARNA18-201ENST00000459004 AXIN2Q9Y2T1 843 aa7.3□□□□□ -1.24
SCARNA18-201ENST00000459004 NUTM2FA1L443 756 aa7.29□□□□□ -1.24
SCARNA18-201ENST00000459004 PSEN2P49810 448 aa7.29□□□□□ -1.24
SCARNA18-201ENST00000459004 LMOD2Q6P5Q4 547 aa7.29□□□□□ -1.24
SCARNA18-201ENST00000459004 CERKQ8TCT0 537 aa7.29□□□□□ -1.24
SCARNA18-201ENST00000459004 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
SCARNA18-201ENST00000459004 COL9A1P20849 921 aa7.27□□□□□ -1.25
SCARNA18-201ENST00000459004 CDHR5Q9HBB8 845 aa7.27□□□□□ -1.25
SCARNA18-201ENST00000459004 FCHSD2O94868 740 aa7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 LSM11P83369 360 aaKnown RBP eCLIP7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 GPIHBP1Q8IV16 184 aa7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
SCARNA18-201ENST00000459004 PTGDRQ13258 359 aa7.25□□□□□ -1.25
SCARNA18-201ENST00000459004 ZBED2Q9BTP6 218 aa7.25□□□□□ -1.25
SCARNA18-201ENST00000459004 SLC4A5Q9BY07 1137 aa7.25□□□□□ -1.25
SCARNA18-201ENST00000459004 TK2O00142 265 aa7.24□□□□□ -1.25
SCARNA18-201ENST00000459004 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
SCARNA18-201ENST00000459004 PRSS12P56730 875 aa7.23□□□□□ -1.25
SCARNA18-201ENST00000459004 ANKRD13DQ6ZTN6 518 aa7.23□□□□□ -1.25
SCARNA18-201ENST00000459004 RBM27Q9P2N5 1060 aaKnown RBP7.23□□□□□ -1.25
SCARNA18-201ENST00000459004 HIC1Q14526 733 aa7.22□□□□□ -1.25
SCARNA18-201ENST00000459004 CDCA7LQ96GN5 454 aa7.22□□□□□ -1.25
SCARNA18-201ENST00000459004 VPS9D1Q9Y2B5 631 aa7.22□□□□□ -1.25
SCARNA18-201ENST00000459004 TRIM6-TRIM34B2RNG4 842 aa7.21□□□□□ -1.26
SCARNA18-201ENST00000459004 GPR37O15354 613 aa7.21□□□□□ -1.26
SCARNA18-201ENST00000459004 ADGRD1Q6QNK2 874 aa7.21□□□□□ -1.26
SCARNA18-201ENST00000459004 GNPATO15228 680 aa7.2□□□□□ -1.26
SCARNA18-201ENST00000459004 PROX2Q3B8N5 592 aa7.2□□□□□ -1.26
SCARNA18-201ENST00000459004 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
SCARNA18-201ENST00000459004 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
SCARNA18-201ENST00000459004 PACS2Q86VP3 889 aa7.19□□□□□ -1.26
SCARNA18-201ENST00000459004 TTC13Q8NBP0 860 aa7.19□□□□□ -1.26
SCARNA18-201ENST00000459004 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
SCARNA18-201ENST00000459004 TSKSQ9UJT2 592 aa7.19□□□□□ -1.26
SCARNA18-201ENST00000459004 HRO43593 1189 aa7.18□□□□□ -1.26
SCARNA18-201ENST00000459004 KIAA1468Q9P260 1216 aa7.18□□□□□ -1.26
SCARNA18-201ENST00000459004 FAM198AQ9UFP1 575 aa7.18□□□□□ -1.26
SCARNA18-201ENST00000459004 BHMG1C9JSJ3 638 aaPredicted RBP7.17□□□□□ -1.26
SCARNA18-201ENST00000459004 ZMYND10O75800 440 aa7.17□□□□□ -1.26
SCARNA18-201ENST00000459004 STAC3Q96MF2 364 aa7.17□□□□□ -1.26
SCARNA18-201ENST00000459004 FECHP22830 423 aa7.16□□□□□ -1.26
SCARNA18-201ENST00000459004 BARGINQ6ZT62 677 aa7.16□□□□□ -1.26
SCARNA18-201ENST00000459004 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
SCARNA18-201ENST00000459004 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
SCARNA18-201ENST00000459004 TATDN2Q93075 761 aa7.15□□□□□ -1.26
SCARNA18-201ENST00000459004 PNMA3Q9UL41 463 aa7.15□□□□□ -1.26
SCARNA18-201ENST00000459004 MINK1Q8N4C8 1332 aaPredicted RBP7.14□□□□□ -1.27
SCARNA18-201ENST00000459004 MRPL50Q8N5N7 158 aaKnown RBP7.14□□□□□ -1.27
SCARNA18-201ENST00000459004 KRI1Q8N9T8 703 aaKnown RBP7.14□□□□□ -1.27
SCARNA18-201ENST00000459004 OATP04181 439 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 NUDT18Q6ZVK8 323 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 LAPTM4BQ86VI4 370 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 SPNS2Q8IVW8 549 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 ADGRG1Q9Y653 693 aa7.13□□□□□ -1.27
SCARNA18-201ENST00000459004 IRF6O14896 467 aa7.12□□□□□ -1.27
SCARNA18-201ENST00000459004 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
SCARNA18-201ENST00000459004 C3orf80F5H4A9 247 aa7.11□□□□□ -1.27
SCARNA18-201ENST00000459004 SMAPO00193 183 aa7.11□□□□□ -1.27
SCARNA18-201ENST00000459004 FAM98CQ17RN3 349 aaKnown RBP7.11□□□□□ -1.27
SCARNA18-201ENST00000459004 EYA1Q99502 592 aa7.11□□□□□ -1.27
SCARNA18-201ENST00000459004 SEPT9Q9UHD8 586 aaPredicted RBP7.11□□□□□ -1.27
SCARNA18-201ENST00000459004 GOLGA8CPA6NN73 597 aa7.1□□□□□ -1.27
SCARNA18-201ENST00000459004 FAM161AQ3B820 660 aa7.1□□□□□ -1.27
SCARNA18-201ENST00000459004 TPRNQ4KMQ1 711 aa7.1□□□□□ -1.27
SCARNA18-201ENST00000459004 PXYLP1Q8TE99 480 aa7.09□□□□□ -1.27
SCARNA18-201ENST00000459004 MYT1LQ9UL68 1186 aa7.09□□□□□ -1.27
SCARNA18-201ENST00000459004 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
SCARNA18-201ENST00000459004 CCDC102AQ96A19 550 aa7.08□□□□□ -1.28
SCARNA18-201ENST00000459004 ZFRQ96KR1 1074 aaKnown RBP7.08□□□□□ -1.28
SCARNA18-201ENST00000459004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.07□□□□□ -1.28
SCARNA18-201ENST00000459004 DNAJB2P25686 324 aa7.07□□□□□ -1.28
SCARNA18-201ENST00000459004 HDGFP51858 240 aaKnown RBP7.07□□□□□ -1.28
SCARNA18-201ENST00000459004 AK7Q96M32 723 aa7.07□□□□□ -1.28
SCARNA18-201ENST00000459004 SLC24A3Q9HC58 644 aa7.07□□□□□ -1.28
SCARNA18-201ENST00000459004 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
SCARNA18-201ENST00000459004 ANKK1Q8NFD2 765 aa7.06□□□□□ -1.28
SCARNA18-201ENST00000459004 WNT2BQ93097 391 aa7.06□□□□□ -1.28
SCARNA18-201ENST00000459004 MMRN1Q13201 1228 aa7.04□□□□□ -1.28
SCARNA18-201ENST00000459004 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
SCARNA18-201ENST00000459004 KCTD12Q96CX2 325 aaKnown RBP7.04□□□□□ -1.28
SCARNA18-201ENST00000459004 LRCH3Q96II8 777 aa7.04□□□□□ -1.28
SCARNA18-201ENST00000459004 TMEM134Q9H6X4 195 aa7.04□□□□□ -1.28
SCARNA18-201ENST00000459004 SOWAHBA6NEL2 793 aa7.03□□□□□ -1.28
SCARNA18-201ENST00000459004 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
SCARNA18-201ENST00000459004 SAMD7Q7Z3H4 446 aa7.03□□□□□ -1.28
SCARNA18-201ENST00000459004 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
SCARNA18-201ENST00000459004 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.03□□□□□ -1.28
SCARNA18-201ENST00000459004 TRIM66O15016 1216 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms