RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 STAC3Q96MF2 364 aa7.55□□□□□ -1.2
HMGB3P30-201ENST00000457863 NBPF3Q9H094 633 aa7.55□□□□□ -1.2
HMGB3P30-201ENST00000457863 KCTD12Q96CX2 325 aaKnown RBP7.54□□□□□ -1.2
HMGB3P30-201ENST00000457863 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
HMGB3P30-201ENST00000457863 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P30-201ENST00000457863 COL9A1P20849 921 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 E2F4Q16254 413 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 RABGEF1Q9UJ41 708 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
HMGB3P30-201ENST00000457863 ONECUT3O60422 494 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PROX2Q3B8N5 592 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 DDX12PQ92771 950 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PRKCSHP14314 528 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 EN1Q05925 392 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 NBR1Q14596 966 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 WNT2BQ93097 391 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 WDR70Q9NW82 654 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
HMGB3P30-201ENST00000457863 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
HMGB3P30-201ENST00000457863 PTPN5P54829 565 aa7.45□□□□□ -1.22
HMGB3P30-201ENST00000457863 RBM33Q96EV2 1170 aaKnown RBP7.45□□□□□ -1.22
HMGB3P30-201ENST00000457863 MAP3K7O43318 606 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 IFFO2Q5TF58 517 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 ANKK1Q8NFD2 765 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 KIAA1468Q9P260 1216 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
HMGB3P30-201ENST00000457863 ARXQ96QS3 562 aa7.43□□□□□ -1.22
HMGB3P30-201ENST00000457863 CERKQ8TCT0 537 aa7.42□□□□□ -1.22
HMGB3P30-201ENST00000457863 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 FAM98CQ17RN3 349 aaKnown RBP7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 OSBPP22059 807 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 NYAP1Q6ZVC0 841 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 RBM27Q9P2N5 1060 aaKnown RBP7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 BCAMP50895 628 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 PACS2Q86VP3 889 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 PRSS12P56730 875 aa7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDCA7LQ96GN5 454 aa7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P30-201ENST00000457863 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
HMGB3P30-201ENST00000457863 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
HMGB3P30-201ENST00000457863 A0A0G2JS52 829 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 NBPF26B4DH59 902 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 BCANQ96GW7 911 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 RGS20O76081 388 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 TSR3Q9UJK0 312 aaKnown RBP7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
HMGB3P30-201ENST00000457863 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P30-201ENST00000457863 HPS5Q9UPZ3 1129 aa7.31□□□□□ -1.24
HMGB3P30-201ENST00000457863 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
HMGB3P30-201ENST00000457863 TATDN2Q93075 761 aa7.3□□□□□ -1.24
HMGB3P30-201ENST00000457863 SMAPO00193 183 aa7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 MLLT3P42568 568 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 PNMA3Q9UL41 463 aa7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 PLCB2Q00722 1185 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 SAMD7Q7Z3H4 446 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 TIMELESSQ9UNS1 1208 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 PADI6Q6TGC4 694 aa7.27□□□□□ -1.25
HMGB3P30-201ENST00000457863 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
HMGB3P30-201ENST00000457863 PPP4CP60510 307 aa7.25□□□□□ -1.25
HMGB3P30-201ENST00000457863 KCNC4Q03721 635 aa7.25□□□□□ -1.25
HMGB3P30-201ENST00000457863 PTGDRQ13258 359 aa7.24□□□□□ -1.25
HMGB3P30-201ENST00000457863 NECTIN2Q92692 538 aa7.24□□□□□ -1.25
HMGB3P30-201ENST00000457863 EYA1Q99502 592 aa7.22□□□□□ -1.25
HMGB3P30-201ENST00000457863 HDGFP51858 240 aaKnown RBP7.21□□□□□ -1.26
HMGB3P30-201ENST00000457863 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.26
HMGB3P30-201ENST00000457863 TULP1O00294 542 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SEMA3EO15041 775 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SLF2Q8IX21 1173 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 MTRQ99707 1265 aa7.19□□□□□ -1.26
HMGB3P30-201ENST00000457863 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
HMGB3P30-201ENST00000457863 TESPA1A2RU30 521 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 RNF40O75150 1001 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 DNAJB2P25686 324 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 APLP1P51693 650 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 FCHSD2O94868 740 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 NUTM2FA1L443 756 aa7.16□□□□□ -1.26
HMGB3P30-201ENST00000457863 TMEM134Q9H6X4 195 aa7.16□□□□□ -1.26
HMGB3P30-201ENST00000457863 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms