RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 HMMRO75330 724 aa14.73□□□□□ -0.05
SMARCAD1-204ENST00000457823 GBP4Q96PP9 640 aa14.73□□□□□ -0.05
SMARCAD1-204ENST00000457823 IGF1RP08069 1367 aa14.73□□□□□ -0.05
SMARCAD1-204ENST00000457823 PLIN1O60240 522 aa14.73□□□□□ -0.05
SMARCAD1-204ENST00000457823 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
SMARCAD1-204ENST00000457823 PHLDB1Q86UU1 1377 aa14.72□□□□□ -0.05
SMARCAD1-204ENST00000457823 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
SMARCAD1-204ENST00000457823 LMOD3Q0VAK6 560 aa14.72□□□□□ -0.05
SMARCAD1-204ENST00000457823 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
SMARCAD1-204ENST00000457823 USP47Q96K76 1375 aa14.71□□□□□ -0.05
SMARCAD1-204ENST00000457823 CHMP3Q9Y3E7 222 aa14.71□□□□□ -0.06
SMARCAD1-204ENST00000457823 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 MSNP26038 577 aaKnown RBP14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 GORABQ5T7V8 394 aa14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 APAF1O14727 1248 aa14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 GNL2Q13823 731 aaKnown RBP14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
SMARCAD1-204ENST00000457823 DRC7Q8IY82 874 aa14.69□□□□□ -0.06
SMARCAD1-204ENST00000457823 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
SMARCAD1-204ENST00000457823 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
SMARCAD1-204ENST00000457823 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
SMARCAD1-204ENST00000457823 EXOC6Q8TAG9 804 aa14.68□□□□□ -0.06
SMARCAD1-204ENST00000457823 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
SMARCAD1-204ENST00000457823 EVC2Q86UK5 1308 aa14.66□□□□□ -0.06
SMARCAD1-204ENST00000457823 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
SMARCAD1-204ENST00000457823 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 ZBED9Q6R2W3 1325 aa14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 COG3Q96JB2 828 aa14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 CCDC9Q9Y3X0 531 aaKnown RBP14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 E9PSI1 815 aa14.65□□□□□ -0.06
SMARCAD1-204ENST00000457823 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
SMARCAD1-204ENST00000457823 GPATCH3Q96I76 525 aa14.63□□□□□ -0.07
SMARCAD1-204ENST00000457823 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 PDE4AP27815 886 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 CENPQQ7L2Z9 268 aaPredicted RBP14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 UACAQ9BZF9 1416 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
SMARCAD1-204ENST00000457823 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
SMARCAD1-204ENST00000457823 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
SMARCAD1-204ENST00000457823 MYOM3Q5VTT5 1437 aa14.6□□□□□ -0.07
SMARCAD1-204ENST00000457823 PTMSP20962 102 aa14.6□□□□□ -0.07
SMARCAD1-204ENST00000457823 SLC4A3P48751 1232 aa14.6□□□□□ -0.07
SMARCAD1-204ENST00000457823 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
SMARCAD1-204ENST00000457823 HTATSF1O43719 755 aaKnown RBP14.59□□□□□ -0.07
SMARCAD1-204ENST00000457823 SYAP1Q96A49 352 aaPredicted RBP14.58□□□□□ -0.07
SMARCAD1-204ENST00000457823 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.08
SMARCAD1-204ENST00000457823 FAM161AQ3B820 660 aa14.58□□□□□ -0.08
SMARCAD1-204ENST00000457823 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
SMARCAD1-204ENST00000457823 KIAA2012Q0VF49 1180 aa14.58□□□□□ -0.08
SMARCAD1-204ENST00000457823 TEFQ10587 303 aa14.58□□□□□ -0.08
SMARCAD1-204ENST00000457823 DIAPH1O60610 1272 aaKnown RBP14.57□□□□□ -0.08
SMARCAD1-204ENST00000457823 HSP90B1P14625 803 aaKnown RBP14.57□□□□□ -0.08
SMARCAD1-204ENST00000457823 GOLGA6L3A6NEY3 463 aa14.57□□□□□ -0.08
SMARCAD1-204ENST00000457823 ST18O60284 1047 aa14.57□□□□□ -0.08
SMARCAD1-204ENST00000457823 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
SMARCAD1-204ENST00000457823 FOXD4L5Q5VV16 416 aaPredicted RBP14.56□□□□□ -0.08
SMARCAD1-204ENST00000457823 FOXD4L4Q8WXT5 416 aaPredicted RBP14.56□□□□□ -0.08
SMARCAD1-204ENST00000457823 RIPK4P57078 832 aa14.56□□□□□ -0.08
SMARCAD1-204ENST00000457823 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
SMARCAD1-204ENST00000457823 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
SMARCAD1-204ENST00000457823 EIF2S2P20042 333 aaKnown RBP14.54□□□□□ -0.08
SMARCAD1-204ENST00000457823 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
SMARCAD1-204ENST00000457823 CLSTN1O94985 981 aa14.53□□□□□ -0.08
SMARCAD1-204ENST00000457823 C1orf141Q5JVX7 400 aa14.53□□□□□ -0.08
SMARCAD1-204ENST00000457823 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
SMARCAD1-204ENST00000457823 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.08
SMARCAD1-204ENST00000457823 TMEM132EQ6IEE7 984 aa14.52□□□□□ -0.08
SMARCAD1-204ENST00000457823 NGEFQ8N5V2 710 aa14.52□□□□□ -0.08
SMARCAD1-204ENST00000457823 NECTIN2Q92692 538 aa14.52□□□□□ -0.08
SMARCAD1-204ENST00000457823 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.082e-6■■■■■ 62.5
SMARCAD1-204ENST00000457823 DZIP1LQ8IYY4 767 aaKnown RBP14.52□□□□□ -0.09
SMARCAD1-204ENST00000457823 ANKRD50Q9ULJ7 1429 aa14.51□□□□□ -0.09
SMARCAD1-204ENST00000457823 GGNBP2Q9H3C7 697 aa14.51□□□□□ -0.09
SMARCAD1-204ENST00000457823 DDX19BQ9UMR2 479 aa14.51□□□□□ -0.09
SMARCAD1-204ENST00000457823 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
SMARCAD1-204ENST00000457823 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
SMARCAD1-204ENST00000457823 TMX4Q9H1E5 349 aaPredicted RBP14.5□□□□□ -0.09
SMARCAD1-204ENST00000457823 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
SMARCAD1-204ENST00000457823 RUNDC1Q96C34 613 aa14.5□□□□□ -0.09
SMARCAD1-204ENST00000457823 FOXD4L6Q3SYB3 417 aaPredicted RBP14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 FOXD4L3Q6VB84 417 aaPredicted RBP14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 C9orf78Q9NZ63 289 aaPredicted RBP14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 WASHC2AQ641Q2 1341 aa14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 LRRC9Q6ZRR7 1453 aa14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 HMOX1P09601 288 aa14.49□□□□□ -0.09
SMARCAD1-204ENST00000457823 KIF21BO75037 1637 aa14.48□□□□□ -0.09
SMARCAD1-204ENST00000457823 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
SMARCAD1-204ENST00000457823 CCDC34Q96HJ3 373 aa14.48□□□□□ -0.09
SMARCAD1-204ENST00000457823 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
SMARCAD1-204ENST00000457823 PSME1Q06323 249 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 CSPP1Q1MSJ5 1256 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms