RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 COL9A1P20849 921 aa12.74□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 BHMG1C9JSJ3 638 aaPredicted RBP12.71□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 NBR1Q14596 966 aa12.71□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
PCDH9-AS4-201ENST00000456459 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 TSR1Q2NL82 804 aaKnown RBP12.65□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
PCDH9-AS4-201ENST00000456459 MAP3K7O43318 606 aa12.64□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 HCSTQ9UBK5 93 aa12.63□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 OSBPP22059 807 aa12.6□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
PCDH9-AS4-201ENST00000456459 GOLGA8CPA6NN73 597 aa12.57□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 WNT2BQ93097 391 aa12.55□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 PTPN5P54829 565 aa12.54□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 MLLT3P42568 568 aaPredicted RBP12.53□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
PCDH9-AS4-201ENST00000456459 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 PRSS12P56730 875 aa12.49□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
PCDH9-AS4-201ENST00000456459 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 BCAMP50895 628 aa12.44□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 SEMA3EO15041 775 aa12.43□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 SMAPO00193 183 aa12.42□□□□□ -0.42
PCDH9-AS4-201ENST00000456459 TATDN2Q93075 761 aa12.39□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 PTGDRQ13258 359 aa12.34□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
PCDH9-AS4-201ENST00000456459 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 NUTM2FA1L443 756 aa12.31□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 TSR3Q9UJK0 312 aaKnown RBP12.31□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 HPS5Q9UPZ3 1129 aa12.31□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
PCDH9-AS4-201ENST00000456459 NYAP1Q6ZVC0 841 aa12.27□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 EYA1Q99502 592 aa12.26□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 PPP4CP60510 307 aa12.24□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 FCHSD2O94868 740 aa12.23□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
PCDH9-AS4-201ENST00000456459 RNF40O75150 1001 aa12.2□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 HIC1Q14526 733 aa12.16□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 A0A0G2JS52 829 aa12.15□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 GPR37O15354 613 aa12.15□□□□□ -0.46
PCDH9-AS4-201ENST00000456459 DNAJB2P25686 324 aa12.14□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 KCNC4Q03721 635 aa12.14□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 FECHP22830 423 aa12.13□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 APLP1P51693 650 aa12.13□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 GNPATO15228 680 aa12.11□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 PXYLP1Q8TE99 480 aa12.09□□□□□ -0.47
PCDH9-AS4-201ENST00000456459 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 GPIHBP1Q8IV16 184 aa12.08□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms