RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 CEBPAP49715 358 aaPredicted RBP10.43□□□□□ -0.74
NCL-206ENST00000454824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.744e-30■■■■■ 32.6
NCL-206ENST00000454824 ADAMTSL3P82987 1691 aa10.43□□□□□ -0.74
NCL-206ENST00000454824 MADDQ8WXG6 1647 aa10.43□□□□□ -0.74
NCL-206ENST00000454824 REREQ9P2R6 1566 aa10.43□□□□□ -0.74
NCL-206ENST00000454824 AGLP35573 1532 aa10.43□□□□□ -0.74
NCL-206ENST00000454824 PTPRMP28827 1452 aa10.42□□□□□ -0.74
NCL-206ENST00000454824 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
NCL-206ENST00000454824 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
NCL-206ENST00000454824 RIMS1Q86UR5 1692 aaKnown RBP10.42□□□□□ -0.74
NCL-206ENST00000454824 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
NCL-206ENST00000454824 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
NCL-206ENST00000454824 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
NCL-206ENST00000454824 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.74
NCL-206ENST00000454824 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
NCL-206ENST00000454824 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.75
NCL-206ENST00000454824 DUOX2Q9NRD8 1548 aa10.38□□□□□ -0.75
NCL-206ENST00000454824 ZMYM3Q14202 1370 aa10.38□□□□□ -0.75
NCL-206ENST00000454824 KANK1Q14678 1352 aa10.38□□□□□ -0.75
NCL-206ENST00000454824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
NCL-206ENST00000454824 CROCC2H7BZ55 1655 aa10.38□□□□□ -0.75
NCL-206ENST00000454824 MYCNP04198 464 aaPredicted RBP10.37□□□□□ -0.75
NCL-206ENST00000454824 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
NCL-206ENST00000454824 PLXNC1O60486 1568 aa10.36□□□□□ -0.75
NCL-206ENST00000454824 SETD1BQ9UPS6 1966 aaKnown RBP10.35□□□□□ -0.75
NCL-206ENST00000454824 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
NCL-206ENST00000454824 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
NCL-206ENST00000454824 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
NCL-206ENST00000454824 ANKRD50Q9ULJ7 1429 aa10.33□□□□□ -0.76
NCL-206ENST00000454824 ROCK1Q13464 1354 aa10.33□□□□□ -0.76
NCL-206ENST00000454824 PTPRKQ15262 1439 aa10.33□□□□□ -0.76
NCL-206ENST00000454824 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
NCL-206ENST00000454824 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
NCL-206ENST00000454824 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
NCL-206ENST00000454824 HSPA2P54652 639 aa10.31□□□□□ -0.76
NCL-206ENST00000454824 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
NCL-206ENST00000454824 KDM5DQ9BY66 1539 aa10.31□□□□□ -0.76
NCL-206ENST00000454824 UHRF1BP1Q6BDS2 1440 aa10.31□□□□□ -0.76
NCL-206ENST00000454824 C3P01024 1663 aa10.31□□□□□ -0.76
NCL-206ENST00000454824 CFAP65Q6ZU64 1925 aaKnown RBP10.31□□□□□ -0.76
NCL-206ENST00000454824 MROH2AA6NES4 1674 aa10.3□□□□□ -0.76
NCL-206ENST00000454824 NPATQ14207 1427 aa10.28□□□□□ -0.76
NCL-206ENST00000454824 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
NCL-206ENST00000454824 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
NCL-206ENST00000454824 FAM135AQ9P2D6 1515 aa10.28□□□□□ -0.76
NCL-206ENST00000454824 NUP155O75694 1391 aa10.27□□□□□ -0.76
NCL-206ENST00000454824 TNRQ92752 1358 aa10.27□□□□□ -0.76
NCL-206ENST00000454824 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
NCL-206ENST00000454824 PREX1Q8TCU6 1659 aa10.26□□□□□ -0.77
NCL-206ENST00000454824 CEP152O94986 1710 aa10.26□□□□□ -0.77
NCL-206ENST00000454824 ABCC3O15438 1527 aa10.26□□□□□ -0.77
NCL-206ENST00000454824 ZC3H13Q5T200 1668 aaKnown RBP10.25□□□□□ -0.77
NCL-206ENST00000454824 PZPP20742 1482 aa10.25□□□□□ -0.77
NCL-206ENST00000454824 LMTK3Q96Q04 1460 aa10.24□□□□□ -0.77
NCL-206ENST00000454824 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
NCL-206ENST00000454824 THEMISQ8N1K5 641 aaPredicted RBP10.24□□□□□ -0.77
NCL-206ENST00000454824 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
NCL-206ENST00000454824 NAIPQ13075 1403 aa10.24□□□□□ -0.77
NCL-206ENST00000454824 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
NCL-206ENST00000454824 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
NCL-206ENST00000454824 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
NCL-206ENST00000454824 CAMSAP1Q5T5Y3 1602 aa10.22□□□□□ -0.77
NCL-206ENST00000454824 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
NCL-206ENST00000454824 HFM1A2PYH4 1435 aa10.22□□□□□ -0.77
NCL-206ENST00000454824 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
NCL-206ENST00000454824 A2ML1A8K2U0 1454 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 ERVK-7P63135 1459 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 SLC52A1Q9NWF4 448 aa10.2□□□□□ -0.78
NCL-206ENST00000454824 LMTK2Q8IWU2 1503 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 NLRP1Q9C000 1473 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 PKD2Q13563 968 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 IDI1Q13907 227 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 BCANQ96GW7 911 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
NCL-206ENST00000454824 GCC2Q8IWJ2 1684 aa10.18□□□□□ -0.78
NCL-206ENST00000454824 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
NCL-206ENST00000454824 UNC13BO14795 1591 aa10.18□□□□□ -0.78
NCL-206ENST00000454824 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
NCL-206ENST00000454824 TET3O43151 1660 aa10.18□□□□□ -0.78
NCL-206ENST00000454824 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
NCL-206ENST00000454824 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
NCL-206ENST00000454824 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
NCL-206ENST00000454824 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
NCL-206ENST00000454824 UGGT1Q9NYU2 1555 aa10.17□□□□□ -0.78
NCL-206ENST00000454824 RPRD2Q5VT52 1461 aaKnown RBP10.17□□□□□ -0.78
NCL-206ENST00000454824 IQGAP3Q86VI3 1631 aa10.16□□□□□ -0.78
NCL-206ENST00000454824 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
NCL-206ENST00000454824 TXNDC2Q86VQ3 553 aa10.16□□□□□ -0.78
NCL-206ENST00000454824 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
NCL-206ENST00000454824 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
NCL-206ENST00000454824 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.78
NCL-206ENST00000454824 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
NCL-206ENST00000454824 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
NCL-206ENST00000454824 TRIM26Q12899 539 aaPredicted RBP10.14□□□□□ -0.79
NCL-206ENST00000454824 ZNF142P52746 1687 aaPredicted RBP10.14□□□□□ -0.79
NCL-206ENST00000454824 NOS1P29475 1434 aa10.14□□□□□ -0.79
NCL-206ENST00000454824 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms