RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
RPS3AP53-201ENST00000454716 HRO43593 1189 aa13.64□□□□□ -0.23
RPS3AP53-201ENST00000454716 DDX12PQ92771 950 aa13.64□□□□□ -0.23
RPS3AP53-201ENST00000454716 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
RPS3AP53-201ENST00000454716 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
RPS3AP53-201ENST00000454716 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
RPS3AP53-201ENST00000454716 NBR1Q14596 966 aa13.6□□□□□ -0.23
RPS3AP53-201ENST00000454716 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
RPS3AP53-201ENST00000454716 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
RPS3AP53-201ENST00000454716 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
RPS3AP53-201ENST00000454716 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
RPS3AP53-201ENST00000454716 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 MAP3K7O43318 606 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 COL9A1P20849 921 aa13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
RPS3AP53-201ENST00000454716 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
RPS3AP53-201ENST00000454716 KCTD12Q96CX2 325 aaKnown RBP13.48□□□□□ -0.25
RPS3AP53-201ENST00000454716 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
RPS3AP53-201ENST00000454716 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
RPS3AP53-201ENST00000454716 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
RPS3AP53-201ENST00000454716 OSBPP22059 807 aa13.44□□□□□ -0.26
RPS3AP53-201ENST00000454716 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
RPS3AP53-201ENST00000454716 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 WNT2BQ93097 391 aa13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
RPS3AP53-201ENST00000454716 PRSS12P56730 875 aa13.38□□□□□ -0.27
RPS3AP53-201ENST00000454716 THSD4Q6ZMP0 1018 aa13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
RPS3AP53-201ENST00000454716 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
RPS3AP53-201ENST00000454716 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
RPS3AP53-201ENST00000454716 PTPN5P54829 565 aa13.34□□□□□ -0.27
RPS3AP53-201ENST00000454716 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 MLLT3P42568 568 aaPredicted RBP13.32□□□□□ -0.28
RPS3AP53-201ENST00000454716 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
RPS3AP53-201ENST00000454716 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
RPS3AP53-201ENST00000454716 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
RPS3AP53-201ENST00000454716 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 SEMA3EO15041 775 aa13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 TATDN2Q93075 761 aa13.25□□□□□ -0.29
RPS3AP53-201ENST00000454716 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
RPS3AP53-201ENST00000454716 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
RPS3AP53-201ENST00000454716 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
RPS3AP53-201ENST00000454716 BCAMP50895 628 aa13.22□□□□□ -0.29
RPS3AP53-201ENST00000454716 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
RPS3AP53-201ENST00000454716 PTGDRQ13258 359 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 TSR3Q9UJK0 312 aaKnown RBP13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 FCHSD2O94868 740 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 SMAPO00193 183 aa13.17□□□□□ -0.3
RPS3AP53-201ENST00000454716 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
RPS3AP53-201ENST00000454716 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
RPS3AP53-201ENST00000454716 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
RPS3AP53-201ENST00000454716 PPP4CP60510 307 aa13.14□□□□□ -0.31
RPS3AP53-201ENST00000454716 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
RPS3AP53-201ENST00000454716 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
RPS3AP53-201ENST00000454716 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
RPS3AP53-201ENST00000454716 HIC1Q14526 733 aa13.1□□□□□ -0.31
RPS3AP53-201ENST00000454716 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
RPS3AP53-201ENST00000454716 EYA1Q99502 592 aa13.08□□□□□ -0.32
RPS3AP53-201ENST00000454716 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 RNF40O75150 1001 aa13.06□□□□□ -0.32
RPS3AP53-201ENST00000454716 DNAJB2P25686 324 aa13.06□□□□□ -0.32
RPS3AP53-201ENST00000454716 OATP04181 439 aa13.05□□□□□ -0.32
RPS3AP53-201ENST00000454716 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
RPS3AP53-201ENST00000454716 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
RPS3AP53-201ENST00000454716 KCNC4Q03721 635 aa13.02□□□□□ -0.33
RPS3AP53-201ENST00000454716 PRR14Q9BWN1 585 aa13.02□□□□□ -0.33
RPS3AP53-201ENST00000454716 GNPATO15228 680 aa13.01□□□□□ -0.33
RPS3AP53-201ENST00000454716 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
RPS3AP53-201ENST00000454716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
RPS3AP53-201ENST00000454716 RGS20O76081 388 aa13□□□□□ -0.33
RPS3AP53-201ENST00000454716 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
RPS3AP53-201ENST00000454716 A0A0G2JS52 829 aa12.97□□□□□ -0.33
RPS3AP53-201ENST00000454716 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
RPS3AP53-201ENST00000454716 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms