RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
RPS3AP53-201ENST00000454716 HRO43593 1189 aa13.64□□□□□ -0.23
RPS3AP53-201ENST00000454716 DDX12PQ92771 950 aa13.64□□□□□ -0.23
RPS3AP53-201ENST00000454716 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
RPS3AP53-201ENST00000454716 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
RPS3AP53-201ENST00000454716 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
RPS3AP53-201ENST00000454716 NBR1Q14596 966 aa13.6□□□□□ -0.23
RPS3AP53-201ENST00000454716 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
RPS3AP53-201ENST00000454716 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
RPS3AP53-201ENST00000454716 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
RPS3AP53-201ENST00000454716 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
RPS3AP53-201ENST00000454716 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 MAP3K7O43318 606 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
RPS3AP53-201ENST00000454716 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
RPS3AP53-201ENST00000454716 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 COL9A1P20849 921 aa13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
RPS3AP53-201ENST00000454716 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
RPS3AP53-201ENST00000454716 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
RPS3AP53-201ENST00000454716 KCTD12Q96CX2 325 aaKnown RBP13.48□□□□□ -0.25
RPS3AP53-201ENST00000454716 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
RPS3AP53-201ENST00000454716 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
RPS3AP53-201ENST00000454716 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
RPS3AP53-201ENST00000454716 OSBPP22059 807 aa13.44□□□□□ -0.26
RPS3AP53-201ENST00000454716 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
RPS3AP53-201ENST00000454716 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 WNT2BQ93097 391 aa13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
RPS3AP53-201ENST00000454716 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
RPS3AP53-201ENST00000454716 PRSS12P56730 875 aa13.38□□□□□ -0.27
RPS3AP53-201ENST00000454716 THSD4Q6ZMP0 1018 aa13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
RPS3AP53-201ENST00000454716 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
RPS3AP53-201ENST00000454716 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
RPS3AP53-201ENST00000454716 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
RPS3AP53-201ENST00000454716 PTPN5P54829 565 aa13.34□□□□□ -0.27
RPS3AP53-201ENST00000454716 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
RPS3AP53-201ENST00000454716 MLLT3P42568 568 aaPredicted RBP13.32□□□□□ -0.28
RPS3AP53-201ENST00000454716 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
RPS3AP53-201ENST00000454716 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
RPS3AP53-201ENST00000454716 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
RPS3AP53-201ENST00000454716 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
RPS3AP53-201ENST00000454716 SEMA3EO15041 775 aa13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
RPS3AP53-201ENST00000454716 TATDN2Q93075 761 aa13.25□□□□□ -0.29
RPS3AP53-201ENST00000454716 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
RPS3AP53-201ENST00000454716 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
RPS3AP53-201ENST00000454716 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
RPS3AP53-201ENST00000454716 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
RPS3AP53-201ENST00000454716 BCAMP50895 628 aa13.22□□□□□ -0.29
RPS3AP53-201ENST00000454716 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
RPS3AP53-201ENST00000454716 PTGDRQ13258 359 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 TSR3Q9UJK0 312 aaKnown RBP13.2□□□□□ -0.3
RPS3AP53-201ENST00000454716 FCHSD2O94868 740 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
RPS3AP53-201ENST00000454716 SMAPO00193 183 aa13.17□□□□□ -0.3
RPS3AP53-201ENST00000454716 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
RPS3AP53-201ENST00000454716 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
RPS3AP53-201ENST00000454716 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
RPS3AP53-201ENST00000454716 PPP4CP60510 307 aa13.14□□□□□ -0.31
RPS3AP53-201ENST00000454716 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
RPS3AP53-201ENST00000454716 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
RPS3AP53-201ENST00000454716 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
RPS3AP53-201ENST00000454716 HIC1Q14526 733 aa13.1□□□□□ -0.31
RPS3AP53-201ENST00000454716 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
RPS3AP53-201ENST00000454716 EYA1Q99502 592 aa13.08□□□□□ -0.32
RPS3AP53-201ENST00000454716 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
RPS3AP53-201ENST00000454716 RNF40O75150 1001 aa13.06□□□□□ -0.32
RPS3AP53-201ENST00000454716 DNAJB2P25686 324 aa13.06□□□□□ -0.32
RPS3AP53-201ENST00000454716 OATP04181 439 aa13.05□□□□□ -0.32
RPS3AP53-201ENST00000454716 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
RPS3AP53-201ENST00000454716 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
RPS3AP53-201ENST00000454716 KCNC4Q03721 635 aa13.02□□□□□ -0.33
RPS3AP53-201ENST00000454716 PRR14Q9BWN1 585 aa13.02□□□□□ -0.33
RPS3AP53-201ENST00000454716 GNPATO15228 680 aa13.01□□□□□ -0.33
RPS3AP53-201ENST00000454716 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
RPS3AP53-201ENST00000454716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
RPS3AP53-201ENST00000454716 RGS20O76081 388 aa13□□□□□ -0.33
RPS3AP53-201ENST00000454716 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
RPS3AP53-201ENST00000454716 A0A0G2JS52 829 aa12.97□□□□□ -0.33
RPS3AP53-201ENST00000454716 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
RPS3AP53-201ENST00000454716 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms