RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 EIF5BO60841 1220 aaKnown RBP25.82■■□□□ 1.72
LMBR1-213ENST00000454132 KIF14Q15058 1648 aa25.81■■□□□ 1.72
LMBR1-213ENST00000454132 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
LMBR1-213ENST00000454132 DDRGK1Q96HY6 314 aa25.78■■□□□ 1.72
LMBR1-213ENST00000454132 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
LMBR1-213ENST00000454132 NUP153P49790 1475 aaKnown RBP25.78■■□□□ 1.72
LMBR1-213ENST00000454132 ANKRD50Q9ULJ7 1429 aa25.77■■□□□ 1.72
LMBR1-213ENST00000454132 PDE3BQ13370 1112 aa25.77■■□□□ 1.72
LMBR1-213ENST00000454132 RALGAPBQ86X10 1494 aa25.76■■□□□ 1.71
LMBR1-213ENST00000454132 PANK3Q9H999 370 aa25.75■■□□□ 1.71
LMBR1-213ENST00000454132 FRAT2O75474 233 aaPredicted RBP25.75■■□□□ 1.71
LMBR1-213ENST00000454132 ANKRD30AQ9BXX3 1397 aa25.74■■□□□ 1.71
LMBR1-213ENST00000454132 PER1O15534 1290 aaPredicted RBP25.74■■□□□ 1.71
LMBR1-213ENST00000454132 KIAA0586Q9BVV6 1533 aa25.73■■□□□ 1.71
LMBR1-213ENST00000454132 ADAMTS8Q9UP79 889 aa25.72■■□□□ 1.71
LMBR1-213ENST00000454132 PARD3Q8TEW0 1356 aa25.71■■□□□ 1.71
LMBR1-213ENST00000454132 HNRNPMP52272 730 aaKnown RBP eCLIP25.7■■□□□ 1.711e-6■■■■■ 29.3
LMBR1-213ENST00000454132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.7■■□□□ 1.71e-6■■□□□ 12
LMBR1-213ENST00000454132 UHRF1BP1Q6BDS2 1440 aa25.68■■□□□ 1.7
LMBR1-213ENST00000454132 FBLN2P98095 1184 aa25.67■■□□□ 1.7
LMBR1-213ENST00000454132 GPATCH8Q9UKJ3 1502 aaKnown RBP25.67■■□□□ 1.7
LMBR1-213ENST00000454132 C8orf34Q49A92 452 aa25.65■■□□□ 1.7
LMBR1-213ENST00000454132 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
LMBR1-213ENST00000454132 TSPY4P0CV99 314 aa25.64■■□□□ 1.7
LMBR1-213ENST00000454132 TSPY10P0CW01 314 aa25.64■■□□□ 1.7
LMBR1-213ENST00000454132 PLB1Q6P1J6 1458 aa25.64■■□□□ 1.69
LMBR1-213ENST00000454132 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
LMBR1-213ENST00000454132 KDM2BQ8NHM5 1336 aa25.62■■□□□ 1.69
LMBR1-213ENST00000454132 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
LMBR1-213ENST00000454132 FAM161AQ3B820 660 aa25.62■■□□□ 1.69
LMBR1-213ENST00000454132 CCDC146Q8IYE0 955 aa25.62■■□□□ 1.69
LMBR1-213ENST00000454132 ARXQ96QS3 562 aa25.62■■□□□ 1.69
LMBR1-213ENST00000454132 TROQ12816 1431 aaPredicted RBP25.62■■□□□ 1.69
LMBR1-213ENST00000454132 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
LMBR1-213ENST00000454132 CENPQQ7L2Z9 268 aaPredicted RBP25.58■■□□□ 1.69
LMBR1-213ENST00000454132 PLEKHH1Q9ULM0 1364 aa25.57■■□□□ 1.68
LMBR1-213ENST00000454132 RAPGEF6Q8TEU7 1601 aa25.57■■□□□ 1.68
LMBR1-213ENST00000454132 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
LMBR1-213ENST00000454132 DUSP27Q5VZP5 1158 aa25.56■■□□□ 1.68
LMBR1-213ENST00000454132 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
LMBR1-213ENST00000454132 WDR43Q15061 677 aaKnown RBP eCLIP25.56■■□□□ 1.68
LMBR1-213ENST00000454132 C9orf84Q5VXU9 1444 aa25.55■■□□□ 1.68
LMBR1-213ENST00000454132 TESK2Q96S53 571 aa25.55■■□□□ 1.68
LMBR1-213ENST00000454132 KIAA0556O60303 1618 aa25.54■■□□□ 1.68
LMBR1-213ENST00000454132 BCAR3O75815 825 aa25.53■■□□□ 1.68
LMBR1-213ENST00000454132 SLKQ9H2G2 1235 aaPredicted RBP25.53■■□□□ 1.68
LMBR1-213ENST00000454132 ADGBQ8N7X0 1667 aa25.53■■□□□ 1.68
LMBR1-213ENST00000454132 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
LMBR1-213ENST00000454132 E9PCH4 1651 aa25.52■■□□□ 1.68
LMBR1-213ENST00000454132 PLEKHD1A6NEE1 506 aa25.52■■□□□ 1.68
LMBR1-213ENST00000454132 ADGRL2O95490 1459 aa25.51■■□□□ 1.67
LMBR1-213ENST00000454132 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
LMBR1-213ENST00000454132 SEC24BO95487 1268 aa25.49■■□□□ 1.67
LMBR1-213ENST00000454132 POGKQ9P215 609 aa25.49■■□□□ 1.67
LMBR1-213ENST00000454132 GOLGA2Q08379 1002 aa25.49■■□□□ 1.67
LMBR1-213ENST00000454132 ARHGEF12Q9NZN5 1544 aa25.48■■□□□ 1.67
LMBR1-213ENST00000454132 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
LMBR1-213ENST00000454132 TMF1P82094 1093 aa25.47■■□□□ 1.67
LMBR1-213ENST00000454132 IGHDP01880 384 aa25.47■■□□□ 1.67
LMBR1-213ENST00000454132 PPP2R1AP30153 589 aa25.47■■□□□ 1.67
LMBR1-213ENST00000454132 CCDC144AA2RUR9 1427 aa25.46■■□□□ 1.67
LMBR1-213ENST00000454132 KNSTRNQ9Y448 316 aa25.46■■□□□ 1.67
LMBR1-213ENST00000454132 ZMYM4Q5VZL5 1548 aa25.43■■□□□ 1.66
LMBR1-213ENST00000454132 SPRYD3Q8NCJ5 442 aa25.43■■□□□ 1.66
LMBR1-213ENST00000454132 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
LMBR1-213ENST00000454132 APAF1O14727 1248 aa25.43■■□□□ 1.66
LMBR1-213ENST00000454132 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
LMBR1-213ENST00000454132 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.41■■□□□ 1.66
LMBR1-213ENST00000454132 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
LMBR1-213ENST00000454132 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
LMBR1-213ENST00000454132 CROCC2H7BZ55 1655 aa25.4■■□□□ 1.66
LMBR1-213ENST00000454132 ITSN2Q9NZM3 1697 aa25.4■■□□□ 1.66
LMBR1-213ENST00000454132 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.66
LMBR1-213ENST00000454132 COL17A1Q9UMD9 1497 aaPredicted RBP25.39■■□□□ 1.65
LMBR1-213ENST00000454132 SLFN5Q08AF3 891 aa25.37■■□□□ 1.65
LMBR1-213ENST00000454132 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
LMBR1-213ENST00000454132 COG6Q9Y2V7 657 aa25.36■■□□□ 1.65
LMBR1-213ENST00000454132 NEUROD2Q15784 382 aa25.35■■□□□ 1.65
LMBR1-213ENST00000454132 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
LMBR1-213ENST00000454132 USP19O94966 1318 aa25.35■■□□□ 1.65
LMBR1-213ENST00000454132 A2MP01023 1474 aa25.35■■□□□ 1.65
LMBR1-213ENST00000454132 TRPM1Q7Z4N2 1603 aa25.35■■□□□ 1.65
LMBR1-213ENST00000454132 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
LMBR1-213ENST00000454132 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
LMBR1-213ENST00000454132 MAGI2Q86UL8 1455 aa25.32■■□□□ 1.64
LMBR1-213ENST00000454132 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
LMBR1-213ENST00000454132 ZNF521Q96K83 1311 aa25.32■■□□□ 1.64
LMBR1-213ENST00000454132 AMER1Q5JTC6 1135 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-213ENST00000454132 GZF1Q9H116 711 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-213ENST00000454132 PLA2R1Q13018 1463 aa25.3■■□□□ 1.64
LMBR1-213ENST00000454132 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
LMBR1-213ENST00000454132 UBE2Q2Q8WVN8 375 aa25.29■■□□□ 1.64
LMBR1-213ENST00000454132 RRAGDQ9NQL2 400 aaPredicted RBP25.28■■□□□ 1.64
LMBR1-213ENST00000454132 TNNQ9UQP3 1299 aa25.28■■□□□ 1.64
LMBR1-213ENST00000454132 BCL2L13Q9BXK5 485 aa25.27■■□□□ 1.64
LMBR1-213ENST00000454132 PTPRGP23470 1445 aa25.27■■□□□ 1.64
LMBR1-213ENST00000454132 FAM43AQ8N2R8 423 aa25.26■■□□□ 1.63
LMBR1-213ENST00000454132 PLEKHH2Q8IVE3 1493 aa25.26■■□□□ 1.63
LMBR1-213ENST00000454132 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
LMBR1-213ENST00000454132 TNNT2P45379 298 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms