RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 PTPRKQ15262 1439 aa30.33■■■□□ 2.45
PMPCB-205ENST00000453466 CEBPAP49715 358 aaPredicted RBP30.29■■■□□ 2.44
PMPCB-205ENST00000453466 ERBINQ96RT1 1412 aa30.29■■■□□ 2.44
PMPCB-205ENST00000453466 ROCK1Q13464 1354 aa30.27■■■□□ 2.44
PMPCB-205ENST00000453466 PCGF6Q9BYE7 350 aa30.27■■■□□ 2.44
PMPCB-205ENST00000453466 WASHC2CQ9Y4E1 1318 aa30.26■■■□□ 2.43
PMPCB-205ENST00000453466 ZMYM3Q14202 1370 aa30.24■■■□□ 2.43
PMPCB-205ENST00000453466 EIF2AK4Q9P2K8 1649 aaKnown RBP30.23■■■□□ 2.43
PMPCB-205ENST00000453466 ANKRD50Q9ULJ7 1429 aa30.2■■■□□ 2.42
PMPCB-205ENST00000453466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.18■■■□□ 2.422e-6■■□□□ 13.3
PMPCB-205ENST00000453466 FAM135AQ9P2D6 1515 aa30.17■■■□□ 2.42
PMPCB-205ENST00000453466 RNF17Q9BXT8 1623 aaKnown RBP30.16■■■□□ 2.42
PMPCB-205ENST00000453466 KDM5DQ9BY66 1539 aa30.15■■■□□ 2.42
PMPCB-205ENST00000453466 CLTCQ00610 1675 aaKnown RBP30.14■■■□□ 2.42
PMPCB-205ENST00000453466 KANK1Q14678 1352 aa30.13■■■□□ 2.41
PMPCB-205ENST00000453466 MROH2AA6NES4 1674 aa30.13■■■□□ 2.41
PMPCB-205ENST00000453466 C3P01024 1663 aa30.1■■■□□ 2.41
PMPCB-205ENST00000453466 NPATQ14207 1427 aa30.07■■■□□ 2.4
PMPCB-205ENST00000453466 MROH1Q8NDA8 1641 aa30.07■■■□□ 2.4
PMPCB-205ENST00000453466 ABCC3O15438 1527 aa30.06■■■□□ 2.4
PMPCB-205ENST00000453466 PRDM15P57071 1507 aaPredicted RBP30.06■■■□□ 2.4
PMPCB-205ENST00000453466 DEPDC5O75140 1603 aa30.02■■■□□ 2.4
PMPCB-205ENST00000453466 FBXO31Q5XUX0 539 aaPredicted RBP30.02■■■□□ 2.4
PMPCB-205ENST00000453466 SETD1BQ9UPS6 1966 aaKnown RBP30.01■■■□□ 2.4
PMPCB-205ENST00000453466 PZPP20742 1482 aa30.01■■■□□ 2.4
PMPCB-205ENST00000453466 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.4
PMPCB-205ENST00000453466 UHRF1BP1Q6BDS2 1440 aa30■■■□□ 2.39
PMPCB-205ENST00000453466 NAIPQ13075 1403 aa30■■■□□ 2.39
PMPCB-205ENST00000453466 LMTK3Q96Q04 1460 aa29.98■■■□□ 2.39
PMPCB-205ENST00000453466 HFM1A2PYH4 1435 aa29.97■■■□□ 2.39
PMPCB-205ENST00000453466 VWDEQ8N2E2 1590 aa29.95■■■□□ 2.38
PMPCB-205ENST00000453466 ARHGAP31Q2M1Z3 1444 aa29.94■■■□□ 2.38
PMPCB-205ENST00000453466 NUP155O75694 1391 aa29.94■■■□□ 2.38
PMPCB-205ENST00000453466 LMTK2Q8IWU2 1503 aa29.94■■■□□ 2.38
PMPCB-205ENST00000453466 TNRQ92752 1358 aa29.93■■■□□ 2.38
PMPCB-205ENST00000453466 HSPA2P54652 639 aa29.93■■■□□ 2.38
PMPCB-205ENST00000453466 CEP152O94986 1710 aa29.93■■■□□ 2.38
PMPCB-205ENST00000453466 PREX1Q8TCU6 1659 aa29.92■■■□□ 2.38
PMPCB-205ENST00000453466 CAMSAP1Q5T5Y3 1602 aa29.9■■■□□ 2.38
PMPCB-205ENST00000453466 UNC13BO14795 1591 aa29.89■■■□□ 2.38
PMPCB-205ENST00000453466 ERVK-7P63135 1459 aa29.85■■■□□ 2.37
PMPCB-205ENST00000453466 GCC2Q8IWJ2 1684 aa29.85■■■□□ 2.37
PMPCB-205ENST00000453466 TRIM52Q96A61 297 aa29.85■■■□□ 2.37
PMPCB-205ENST00000453466 SPATA31D1Q6ZQQ2 1576 aa29.82■■■□□ 2.36
PMPCB-205ENST00000453466 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
PMPCB-205ENST00000453466 NLRP1Q9C000 1473 aa29.8■■■□□ 2.36
PMPCB-205ENST00000453466 A2ML1A8K2U0 1454 aa29.79■■■□□ 2.36
PMPCB-205ENST00000453466 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
PMPCB-205ENST00000453466 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
PMPCB-205ENST00000453466 IQGAP3Q86VI3 1631 aa29.78■■■□□ 2.36
PMPCB-205ENST00000453466 MYO3AQ8NEV4 1616 aa29.78■■■□□ 2.36
PMPCB-205ENST00000453466 SETD5Q9C0A6 1442 aa29.78■■■□□ 2.36
PMPCB-205ENST00000453466 TET3O43151 1660 aa29.77■■■□□ 2.36
PMPCB-205ENST00000453466 CEP170BQ9Y4F5 1589 aaPredicted RBP29.76■■■□□ 2.35
PMPCB-205ENST00000453466 THEMISQ8N1K5 641 aaPredicted RBP29.75■■■□□ 2.35
PMPCB-205ENST00000453466 CFAP65Q6ZU64 1925 aaKnown RBP29.74■■■□□ 2.35
PMPCB-205ENST00000453466 NOS1P29475 1434 aa29.73■■■□□ 2.35
PMPCB-205ENST00000453466 SLC52A1Q9NWF4 448 aa29.71■■■□□ 2.35
PMPCB-205ENST00000453466 ZNF142P52746 1687 aaPredicted RBP29.71■■■□□ 2.35
PMPCB-205ENST00000453466 SLC4A1APQ9BWU0 796 aaKnown RBP29.71■■■□□ 2.35
PMPCB-205ENST00000453466 IDI1Q13907 227 aa29.7■■■□□ 2.34
PMPCB-205ENST00000453466 DMRT2Q9Y5R5 561 aa29.69■■■□□ 2.34
PMPCB-205ENST00000453466 STAG3Q9UJ98 1225 aa29.68■■■□□ 2.34
PMPCB-205ENST00000453466 UGGT1Q9NYU2 1555 aa29.68■■■□□ 2.34
PMPCB-205ENST00000453466 PKD2Q13563 968 aa29.66■■■□□ 2.34
PMPCB-205ENST00000453466 RAB3GAP2Q9H2M9 1393 aa29.65■■■□□ 2.34
PMPCB-205ENST00000453466 PLA2R1Q13018 1463 aa29.64■■■□□ 2.34
PMPCB-205ENST00000453466 E9PCH4 1651 aa29.64■■■□□ 2.34
PMPCB-205ENST00000453466 HRCP23327 699 aa29.62■■■□□ 2.33
PMPCB-205ENST00000453466 SYNMO15061 1565 aa29.62■■■□□ 2.33
PMPCB-205ENST00000453466 NCKAP5LQ9HCH0 1330 aa29.61■■■□□ 2.33
PMPCB-205ENST00000453466 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
PMPCB-205ENST00000453466 MPHOSPH9Q99550 1183 aa29.61■■■□□ 2.33
PMPCB-205ENST00000453466 PTPRTO14522 1441 aa29.56■■■□□ 2.32
PMPCB-205ENST00000453466 STRCQ7RTU9 1775 aa29.55■■■□□ 2.32
PMPCB-205ENST00000453466 PIK3C2BO00750 1634 aa29.53■■■□□ 2.32
PMPCB-205ENST00000453466 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
PMPCB-205ENST00000453466 UBR1Q8IWV7 1749 aa29.51■■■□□ 2.32
PMPCB-205ENST00000453466 EID1Q9Y6B2 187 aa29.51■■■□□ 2.32
PMPCB-205ENST00000453466 FOXD1Q16676 465 aa29.5■■■□□ 2.31
PMPCB-205ENST00000453466 TXNDC2Q86VQ3 553 aa29.5■■■□□ 2.31
PMPCB-205ENST00000453466 TMEM2Q9UHN6 1383 aa29.49■■■□□ 2.31
PMPCB-205ENST00000453466 ADGRB3O60242 1522 aa29.46■■■□□ 2.31
PMPCB-205ENST00000453466 HDGFP51858 240 aaKnown RBP29.46■■■□□ 2.31
PMPCB-205ENST00000453466 KDM5AP29375 1690 aaKnown RBP29.46■■■□□ 2.31
PMPCB-205ENST00000453466 ARHGAP23Q9P227 1491 aa29.45■■■□□ 2.31
PMPCB-205ENST00000453466 SLIT1O75093 1534 aa29.45■■■□□ 2.3
PMPCB-205ENST00000453466 LTKP29376 864 aa29.45■■■□□ 2.3
PMPCB-205ENST00000453466 SPHKAPQ2M3C7 1700 aa29.45■■■□□ 2.3
PMPCB-205ENST00000453466 TRPM2O94759 1503 aa29.43■■■□□ 2.3
PMPCB-205ENST00000453466 SCAF11Q99590 1463 aaKnown RBP29.41■■■□□ 2.3
PMPCB-205ENST00000453466 NPHP4O75161 1426 aaPredicted RBP29.41■■■□□ 2.3
PMPCB-205ENST00000453466 MED14O60244 1454 aa29.4■■■□□ 2.3
PMPCB-205ENST00000453466 TMEM131LA2VDJ0 1609 aa29.39■■■□□ 2.3
PMPCB-205ENST00000453466 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.39■■■□□ 2.3
PMPCB-205ENST00000453466 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
PMPCB-205ENST00000453466 NEURL4Q96JN8 1562 aa29.36■■■□□ 2.29
PMPCB-205ENST00000453466 POLR1AO95602 1720 aaPredicted RBP29.36■■■□□ 2.29
PMPCB-205ENST00000453466 PPP1R15AO75807 674 aaPredicted RBP29.35■■■□□ 2.29
PMPCB-205ENST00000453466 RIMS2Q9UQ26 1411 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms