RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
NCKIPSD-207ENST00000453349 FER1L4A9Z1Z3 1794 aa21.94■■□□□ 1.1
NCKIPSD-207ENST00000453349 CNTLNQ9NXG0 1405 aa21.93■■□□□ 1.1
NCKIPSD-207ENST00000453349 RIMS1Q86UR5 1692 aaKnown RBP21.92■■□□□ 1.1
NCKIPSD-207ENST00000453349 KANK1Q14678 1352 aa21.92■■□□□ 1.1
NCKIPSD-207ENST00000453349 PLPPR3Q6T4P5 718 aa21.91■■□□□ 1.1
NCKIPSD-207ENST00000453349 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
NCKIPSD-207ENST00000453349 PTPRMP28827 1452 aa21.9■■□□□ 1.1
NCKIPSD-207ENST00000453349 NAIPQ13075 1403 aa21.9■■□□□ 1.1
NCKIPSD-207ENST00000453349 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
NCKIPSD-207ENST00000453349 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
NCKIPSD-207ENST00000453349 FAM135AQ9P2D6 1515 aa21.87■■□□□ 1.09
NCKIPSD-207ENST00000453349 CLTCQ00610 1675 aaKnown RBP21.87■■□□□ 1.09
NCKIPSD-207ENST00000453349 KDM5DQ9BY66 1539 aa21.86■■□□□ 1.09
NCKIPSD-207ENST00000453349 CEBPAP49715 358 aaPredicted RBP21.86■■□□□ 1.09
NCKIPSD-207ENST00000453349 TRIM26Q12899 539 aaPredicted RBP21.86■■□□□ 1.09
NCKIPSD-207ENST00000453349 GCC2Q8IWJ2 1684 aa21.85■■□□□ 1.09
NCKIPSD-207ENST00000453349 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
NCKIPSD-207ENST00000453349 MROH1Q8NDA8 1641 aa21.84■■□□□ 1.09
NCKIPSD-207ENST00000453349 MROH2AA6NES4 1674 aa21.84■■□□□ 1.09
NCKIPSD-207ENST00000453349 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
NCKIPSD-207ENST00000453349 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
NCKIPSD-207ENST00000453349 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
NCKIPSD-207ENST00000453349 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
NCKIPSD-207ENST00000453349 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
NCKIPSD-207ENST00000453349 NUP155O75694 1391 aa21.8■■□□□ 1.08
NCKIPSD-207ENST00000453349 ABCC3O15438 1527 aa21.8■■□□□ 1.08
NCKIPSD-207ENST00000453349 C3P01024 1663 aa21.79■■□□□ 1.08
NCKIPSD-207ENST00000453349 UNC13BO14795 1591 aa21.79■■□□□ 1.08
NCKIPSD-207ENST00000453349 CEP152O94986 1710 aa21.78■■□□□ 1.08
NCKIPSD-207ENST00000453349 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
NCKIPSD-207ENST00000453349 LMTK2Q8IWU2 1503 aa21.75■■□□□ 1.07
NCKIPSD-207ENST00000453349 CAMSAP1Q5T5Y3 1602 aa21.74■■□□□ 1.07
NCKIPSD-207ENST00000453349 PZPP20742 1482 aa21.73■■□□□ 1.07
NCKIPSD-207ENST00000453349 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-207ENST00000453349 NPATQ14207 1427 aa21.72■■□□□ 1.07
NCKIPSD-207ENST00000453349 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
NCKIPSD-207ENST00000453349 RAB3GAP2Q9H2M9 1393 aa21.72■■□□□ 1.07
NCKIPSD-207ENST00000453349 IQGAP3Q86VI3 1631 aa21.71■■□□□ 1.07
NCKIPSD-207ENST00000453349 HRCP23327 699 aa21.71■■□□□ 1.07
NCKIPSD-207ENST00000453349 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
NCKIPSD-207ENST00000453349 TET3O43151 1660 aa21.68■■□□□ 1.06
NCKIPSD-207ENST00000453349 EFCAB6Q5THR3 1501 aa21.66■■□□□ 1.06
NCKIPSD-207ENST00000453349 TNRQ92752 1358 aa21.66■■□□□ 1.06
NCKIPSD-207ENST00000453349 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
NCKIPSD-207ENST00000453349 RPRD2Q5VT52 1461 aaKnown RBP21.64■■□□□ 1.06
NCKIPSD-207ENST00000453349 UHRF1BP1Q6BDS2 1440 aa21.64■■□□□ 1.06
NCKIPSD-207ENST00000453349 ERVK-7P63135 1459 aa21.64■■□□□ 1.05
NCKIPSD-207ENST00000453349 MPHOSPH9Q99550 1183 aa21.63■■□□□ 1.05
NCKIPSD-207ENST00000453349 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
NCKIPSD-207ENST00000453349 SPATA31D1Q6ZQQ2 1576 aa21.62■■□□□ 1.05
NCKIPSD-207ENST00000453349 PKD2Q13563 968 aa21.62■■□□□ 1.05
NCKIPSD-207ENST00000453349 PREX1Q8TCU6 1659 aa21.62■■□□□ 1.05
NCKIPSD-207ENST00000453349 E9PCH4 1651 aa21.6■■□□□ 1.05
NCKIPSD-207ENST00000453349 NOS1P29475 1434 aa21.57■■□□□ 1.04
NCKIPSD-207ENST00000453349 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
NCKIPSD-207ENST00000453349 SLC52A1Q9NWF4 448 aa21.57■■□□□ 1.04
NCKIPSD-207ENST00000453349 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
NCKIPSD-207ENST00000453349 MYO3AQ8NEV4 1616 aa21.55■■□□□ 1.04
NCKIPSD-207ENST00000453349 LMTK3Q96Q04 1460 aa21.55■■□□□ 1.04
NCKIPSD-207ENST00000453349 A2ML1A8K2U0 1454 aa21.54■■□□□ 1.04
NCKIPSD-207ENST00000453349 IDI1Q13907 227 aa21.54■■□□□ 1.04
NCKIPSD-207ENST00000453349 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
NCKIPSD-207ENST00000453349 HSPA2P54652 639 aa21.52■■□□□ 1.04
NCKIPSD-207ENST00000453349 FOXD1Q16676 465 aa21.52■■□□□ 1.04
NCKIPSD-207ENST00000453349 THEMISQ8N1K5 641 aaPredicted RBP21.52■■□□□ 1.04
NCKIPSD-207ENST00000453349 SYNMO15061 1565 aa21.51■■□□□ 1.03
NCKIPSD-207ENST00000453349 CEP170BQ9Y4F5 1589 aaPredicted RBP21.51■■□□□ 1.03
NCKIPSD-207ENST00000453349 PTPRTO14522 1441 aa21.5■■□□□ 1.03
NCKIPSD-207ENST00000453349 ZNF142P52746 1687 aaPredicted RBP21.5■■□□□ 1.03
NCKIPSD-207ENST00000453349 UGGT1Q9NYU2 1555 aa21.49■■□□□ 1.03
NCKIPSD-207ENST00000453349 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
NCKIPSD-207ENST00000453349 SPHKAPQ2M3C7 1700 aa21.48■■□□□ 1.03
NCKIPSD-207ENST00000453349 PIK3C2BO00750 1634 aa21.44■■□□□ 1.02
NCKIPSD-207ENST00000453349 TRPM2O94759 1503 aa21.43■■□□□ 1.02
NCKIPSD-207ENST00000453349 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
NCKIPSD-207ENST00000453349 UBR1Q8IWV7 1749 aa21.41■■□□□ 1.02
NCKIPSD-207ENST00000453349 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
NCKIPSD-207ENST00000453349 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-207ENST00000453349 KDM5AP29375 1690 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-207ENST00000453349 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.02
NCKIPSD-207ENST00000453349 EID1Q9Y6B2 187 aa21.39■■□□□ 1.01
NCKIPSD-207ENST00000453349 ADGRB3O60242 1522 aa21.39■■□□□ 1.01
NCKIPSD-207ENST00000453349 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
NCKIPSD-207ENST00000453349 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
NCKIPSD-207ENST00000453349 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
NCKIPSD-207ENST00000453349 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
NCKIPSD-207ENST00000453349 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
NCKIPSD-207ENST00000453349 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
NCKIPSD-207ENST00000453349 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
NCKIPSD-207ENST00000453349 TMEM2Q9UHN6 1383 aa21.36■■□□□ 1.01
NCKIPSD-207ENST00000453349 KIF1BO60333 1816 aa21.34■■□□□ 1.01
NCKIPSD-207ENST00000453349 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
NCKIPSD-207ENST00000453349 SLIT1O75093 1534 aa21.33■■□□□ 1
NCKIPSD-207ENST00000453349 DHX57Q6P158 1386 aaKnown RBP21.32■■□□□ 1
NCKIPSD-207ENST00000453349 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
NCKIPSD-207ENST00000453349 STRCQ7RTU9 1775 aa21.31■■□□□ 1
NCKIPSD-207ENST00000453349 LTKP29376 864 aa21.31■■□□□ 1
NCKIPSD-207ENST00000453349 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
NCKIPSD-207ENST00000453349 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms