RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
RFC4-210ENST00000449502 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.19
RFC4-210ENST00000449502 UNC13BO14795 1591 aa13.87□□□□□ -0.19
RFC4-210ENST00000449502 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
RFC4-210ENST00000449502 YEATS2Q9ULM3 1422 aa13.85□□□□□ -0.19
RFC4-210ENST00000449502 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
RFC4-210ENST00000449502 KIDINS220Q9ULH0 1771 aa13.85□□□□□ -0.19
RFC4-210ENST00000449502 ATP10AO60312 1499 aa13.85□□□□□ -0.19
RFC4-210ENST00000449502 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
RFC4-210ENST00000449502 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
RFC4-210ENST00000449502 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
RFC4-210ENST00000449502 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.2
RFC4-210ENST00000449502 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
RFC4-210ENST00000449502 RPRD2Q5VT52 1461 aaKnown RBP13.82□□□□□ -0.2
RFC4-210ENST00000449502 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
RFC4-210ENST00000449502 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
RFC4-210ENST00000449502 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
RFC4-210ENST00000449502 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
RFC4-210ENST00000449502 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
RFC4-210ENST00000449502 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
RFC4-210ENST00000449502 ARID4BQ4LE39 1312 aaPredicted RBP13.81□□□□□ -0.2
RFC4-210ENST00000449502 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
RFC4-210ENST00000449502 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
RFC4-210ENST00000449502 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
RFC4-210ENST00000449502 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
RFC4-210ENST00000449502 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
RFC4-210ENST00000449502 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
RFC4-210ENST00000449502 MLECQ14165 292 aa13.77□□□□□ -0.21
RFC4-210ENST00000449502 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
RFC4-210ENST00000449502 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
RFC4-210ENST00000449502 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
RFC4-210ENST00000449502 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
RFC4-210ENST00000449502 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
RFC4-210ENST00000449502 DCAF11Q8TEB1 546 aa13.74□□□□□ -0.21
RFC4-210ENST00000449502 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
RFC4-210ENST00000449502 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
RFC4-210ENST00000449502 AGLP35573 1532 aa13.74□□□□□ -0.21
RFC4-210ENST00000449502 ARHGEF40Q8TER5 1519 aa13.73□□□□□ -0.21
RFC4-210ENST00000449502 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
RFC4-210ENST00000449502 PTPRTO14522 1441 aa13.73□□□□□ -0.21
RFC4-210ENST00000449502 REREQ9P2R6 1566 aa13.72□□□□□ -0.21
RFC4-210ENST00000449502 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
RFC4-210ENST00000449502 TET3O43151 1660 aa13.72□□□□□ -0.21
RFC4-210ENST00000449502 ABCC3O15438 1527 aa13.71□□□□□ -0.21
RFC4-210ENST00000449502 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.22
RFC4-210ENST00000449502 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
RFC4-210ENST00000449502 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
RFC4-210ENST00000449502 NPATQ14207 1427 aa13.69□□□□□ -0.22
RFC4-210ENST00000449502 BCORL1Q5H9F3 1711 aa13.69□□□□□ -0.22
RFC4-210ENST00000449502 TRPM2O94759 1503 aa13.69□□□□□ -0.22
RFC4-210ENST00000449502 ARHGAP31Q2M1Z3 1444 aa13.68□□□□□ -0.22
RFC4-210ENST00000449502 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
RFC4-210ENST00000449502 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
RFC4-210ENST00000449502 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
RFC4-210ENST00000449502 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
RFC4-210ENST00000449502 E9PCH4 1651 aa13.66□□□□□ -0.22
RFC4-210ENST00000449502 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
RFC4-210ENST00000449502 DIEXFQ68CQ4 756 aaKnown RBP13.64□□□□□ -0.23
RFC4-210ENST00000449502 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
RFC4-210ENST00000449502 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
RFC4-210ENST00000449502 NOS1P29475 1434 aa13.63□□□□□ -0.23
RFC4-210ENST00000449502 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
RFC4-210ENST00000449502 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
RFC4-210ENST00000449502 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
RFC4-210ENST00000449502 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
RFC4-210ENST00000449502 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
RFC4-210ENST00000449502 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
RFC4-210ENST00000449502 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
RFC4-210ENST00000449502 CEP152O94986 1710 aa13.61□□□□□ -0.23
RFC4-210ENST00000449502 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
RFC4-210ENST00000449502 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
RFC4-210ENST00000449502 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
RFC4-210ENST00000449502 IDI1Q13907 227 aa13.59□□□□□ -0.23
RFC4-210ENST00000449502 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
RFC4-210ENST00000449502 CLTCL1P53675 1640 aa13.57□□□□□ -0.24
RFC4-210ENST00000449502 ERVK-7P63135 1459 aa13.57□□□□□ -0.24
RFC4-210ENST00000449502 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
RFC4-210ENST00000449502 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
RFC4-210ENST00000449502 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
RFC4-210ENST00000449502 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
RFC4-210ENST00000449502 TNRQ92752 1358 aa13.55□□□□□ -0.24
RFC4-210ENST00000449502 USP47Q96K76 1375 aa13.55□□□□□ -0.24
RFC4-210ENST00000449502 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
RFC4-210ENST00000449502 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
RFC4-210ENST00000449502 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.25
RFC4-210ENST00000449502 ADGRF5Q8IZF2 1346 aa13.52□□□□□ -0.25
RFC4-210ENST00000449502 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
RFC4-210ENST00000449502 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
RFC4-210ENST00000449502 MYOM2P54296 1465 aa13.51□□□□□ -0.25
RFC4-210ENST00000449502 SYNMO15061 1565 aa13.5□□□□□ -0.25
RFC4-210ENST00000449502 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
RFC4-210ENST00000449502 DDX10Q13206 875 aaKnown RBP13.5□□□□□ -0.25
RFC4-210ENST00000449502 NUTM2DQ5VT03 806 aaPredicted RBP13.5□□□□□ -0.25
RFC4-210ENST00000449502 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
RFC4-210ENST00000449502 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
RFC4-210ENST00000449502 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
RFC4-210ENST00000449502 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
RFC4-210ENST00000449502 SIGLEC1Q9BZZ2 1709 aa13.49□□□□□ -0.25
RFC4-210ENST00000449502 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
RFC4-210ENST00000449502 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms