RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	EFCAB5	A4FU69	1503 aa		13.33	□□□□□ -0.28
SORBS2-231	ENST00000449407	PLEKHG5	O94827	1062 aa		13.33	□□□□□ -0.28
SORBS2-231	ENST00000449407	GOLGA2	Q08379	1002 aa		13.32	□□□□□ -0.28
SORBS2-231	ENST00000449407	PANK1	Q8TE04	598 aa		13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	UGGT2	Q9NYU1	1516 aa		13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	RRP9	O43818	475 aa	Known RBP	13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	CLCN1	P35523	988 aa		13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	TBC1D2	Q9BYX2	928 aa		13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	UPF2	Q9HAU5	1272 aa	Known RBP	13.31	□□□□□ -0.28
SORBS2-231	ENST00000449407	CDK13	Q14004	1512 aa	Known RBP	13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	NEUROD2	Q15784	382 aa		13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	MYH16	Q9H6N6	1097 aa		13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	TRIM44	Q96DX7	344 aa	Predicted RBP	13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	ABCA5	Q8WWZ7	1642 aa		13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	PLEKHH1	Q9ULM0	1364 aa		13.3	□□□□□ -0.28
SORBS2-231	ENST00000449407	EHBP1L1	Q8N3D4	1523 aa		13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	PER1	O15534	1290 aa	Predicted RBP	13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	CADPS	Q9ULU8	1353 aa		13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	DAPK1	P53355	1430 aa		13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	TRAK2	O60296	914 aa		13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.29	□□□□□ -0.28
SORBS2-231	ENST00000449407	GRIN2B	Q13224	1484 aa		13.28	□□□□□ -0.28
SORBS2-231	ENST00000449407	ERBB4	Q15303	1308 aa		13.28	□□□□□ -0.28
SORBS2-231	ENST00000449407	RBM10	P98175	930 aa	Known RBP	13.28	□□□□□ -0.28
SORBS2-231	ENST00000449407	MCM4	P33991	863 aa		13.28	□□□□□ -0.28
SORBS2-231	ENST00000449407	BCL2L13	Q9BXK5	485 aa		13.28	□□□□□ -0.28
SORBS2-231	ENST00000449407	ABCC5	O15440	1437 aa		13.27	□□□□□ -0.28
SORBS2-231	ENST00000449407	HMGXB3	Q12766	1538 aa		13.27	□□□□□ -0.28
SORBS2-231	ENST00000449407	NUP155	O75694	1391 aa		13.27	□□□□□ -0.28
SORBS2-231	ENST00000449407	CLUAP1	Q96AJ1	413 aa		13.27	□□□□□ -0.28
SORBS2-231	ENST00000449407	PODXL2	Q9NZ53	605 aa		13.27	□□□□□ -0.28
SORBS2-231	ENST00000449407	PARD3	Q8TEW0	1356 aa		13.27	□□□□□ -0.29
SORBS2-231	ENST00000449407		A0A0U1RQG5	324 aa	Predicted RBP	13.27	□□□□□ -0.29
SORBS2-231	ENST00000449407	ESPN	B1AK53	854 aa		13.27	□□□□□ -0.29
SORBS2-231	ENST00000449407	APAF1	O14727	1248 aa		13.27	□□□□□ -0.29
SORBS2-231	ENST00000449407	MFAP1	P55081	439 aa	Known RBP	13.26	□□□□□ -0.29
SORBS2-231	ENST00000449407	ANTXR1	Q9H6X2	564 aa		13.26	□□□□□ -0.29
SORBS2-231	ENST00000449407	LRRIQ1	Q96JM4	1722 aa		13.26	□□□□□ -0.29
SORBS2-231	ENST00000449407	FOXD4L1	Q9NU39	408 aa		13.26	□□□□□ -0.29
SORBS2-231	ENST00000449407	GCC2	Q8IWJ2	1684 aa		13.24	□□□□□ -0.29
SORBS2-231	ENST00000449407	GRPEL1	Q9HAV7	217 aa		13.24	□□□□□ -0.29
SORBS2-231	ENST00000449407	DMRT2	Q9Y5R5	561 aa		13.24	□□□□□ -0.29
SORBS2-231	ENST00000449407	KIAA1107	Q9UPP5	1409 aa		13.24	□□□□□ -0.29
SORBS2-231	ENST00000449407	ZBTB7C	A1YPR0	619 aa		13.23	□□□□□ -0.29
SORBS2-231	ENST00000449407	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	1e-6	■□□□□ 10.3
SORBS2-231	ENST00000449407	TNN	Q9UQP3	1299 aa		13.23	□□□□□ -0.29
SORBS2-231	ENST00000449407	PZP	P20742	1482 aa		13.23	□□□□□ -0.29
SORBS2-231	ENST00000449407	TCOF1	Q13428	1488 aa	Known RBP	13.23	□□□□□ -0.29
SORBS2-231	ENST00000449407	KDM5C	P41229	1560 aa		13.23	□□□□□ -0.29
SORBS2-231	ENST00000449407	KNSTRN	Q9Y448	316 aa		13.22	□□□□□ -0.29
SORBS2-231	ENST00000449407	FSD2	A1L4K1	749 aa		13.21	□□□□□ -0.29
SORBS2-231	ENST00000449407	MRE11	P49959	708 aa		13.21	□□□□□ -0.29
SORBS2-231	ENST00000449407	DISP3	Q9P2K9	1392 aa		13.21	□□□□□ -0.29
SORBS2-231	ENST00000449407	SLFN5	Q08AF3	891 aa		13.21	□□□□□ -0.29
SORBS2-231	ENST00000449407	POLA1	P09884	1462 aa	Predicted RBP	13.21	□□□□□ -0.3
SORBS2-231	ENST00000449407	KIAA1211	Q6ZU35	1233 aa		13.2	□□□□□ -0.3
SORBS2-231	ENST00000449407	FAM13B	Q9NYF5	915 aa		13.2	□□□□□ -0.3
SORBS2-231	ENST00000449407	RRP7A	Q9Y3A4	280 aa	Known RBP	13.2	□□□□□ -0.3
SORBS2-231	ENST00000449407	PPP2R1A	P30153	589 aa		13.2	□□□□□ -0.3
SORBS2-231	ENST00000449407	EPRS	P07814	1512 aa	Known RBP	13.19	□□□□□ -0.3
SORBS2-231	ENST00000449407	FANCD2	Q9BXW9	1451 aa		13.19	□□□□□ -0.3
SORBS2-231	ENST00000449407	POLR1A	O95602	1720 aa	Predicted RBP	13.19	□□□□□ -0.3
SORBS2-231	ENST00000449407	TBC1D32	Q96NH3	1257 aa		13.19	□□□□□ -0.3
SORBS2-231	ENST00000449407	GAS2L3	Q86XJ1	694 aa		13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	PDZRN3	Q9UPQ7	1066 aa		13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	MBD5	Q9P267	1494 aa		13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	THOC2	Q8NI27	1593 aa	Known RBP	13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	MAPK8IP3	Q9UPT6	1336 aa		13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	ROCK1	Q13464	1354 aa		13.18	□□□□□ -0.3
SORBS2-231	ENST00000449407	TNNT2	P45379	298 aa	Predicted RBP	13.17	□□□□□ -0.3
SORBS2-231	ENST00000449407	PCDHB15	Q9Y5E8	787 aa		13.17	□□□□□ -0.3
SORBS2-231	ENST00000449407	CHMP5	Q9NZZ3	219 aa		13.17	□□□□□ -0.3
SORBS2-231	ENST00000449407	ARHGEF11	O15085	1522 aa		13.17	□□□□□ -0.3
SORBS2-231	ENST00000449407	BLM	P54132	1417 aa	Predicted RBP	13.17	□□□□□ -0.3
SORBS2-231	ENST00000449407	RALGAPB	Q86X10	1494 aa		13.16	□□□□□ -0.3
SORBS2-231	ENST00000449407	TMF1	P82094	1093 aa		13.16	□□□□□ -0.3
SORBS2-231	ENST00000449407	C22orf23	Q9BZE7	217 aa		13.15	□□□□□ -0.3
SORBS2-231	ENST00000449407	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.15	□□□□□ -0.3
SORBS2-231	ENST00000449407	CTTNBP2	Q8WZ74	1663 aa		13.14	□□□□□ -0.31
SORBS2-231	ENST00000449407	RLBP1	P12271	317 aa		13.14	□□□□□ -0.31
SORBS2-231	ENST00000449407	ZMYM4	Q5VZL5	1548 aa		13.14	□□□□□ -0.31
SORBS2-231	ENST00000449407	ABCA10	Q8WWZ4	1543 aa		13.14	□□□□□ -0.31
SORBS2-231	ENST00000449407	KIF14	Q15058	1648 aa		13.14	□□□□□ -0.31
SORBS2-231	ENST00000449407	HSCB	Q8IWL3	235 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	TESK2	Q96S53	571 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	DNAJC5B	Q9UF47	199 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	ANKRD50	Q9ULJ7	1429 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	CGNL1	Q0VF96	1302 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	KIAA0586	Q9BVV6	1533 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	NCL	P19338	710 aa	Known RBP	13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	PRDM10	Q9NQV6	1147 aa		13.13	□□□□□ -0.31
SORBS2-231	ENST00000449407	PDCL3	Q9H2J4	239 aa		13.12	□□□□□ -0.31
SORBS2-231	ENST00000449407	TSPY4	P0CV99	314 aa		13.11	□□□□□ -0.31
SORBS2-231	ENST00000449407	TSPY10	P0CW01	314 aa		13.11	□□□□□ -0.31
SORBS2-231	ENST00000449407	EIF3A	Q14152	1382 aa	Known RBP	13.11	□□□□□ -0.31
SORBS2-231	ENST00000449407	ZNF521	Q96K83	1311 aa		13.11	□□□□□ -0.31
SORBS2-231	ENST00000449407	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	4e-9	■■□□□ 13.9
SORBS2-231	ENST00000449407	PRG4	Q92954	1404 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms