RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
SNHG4-201ENST00000448190 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
SNHG4-201ENST00000448190 ADGRL2O95490 1459 aa20.22■□□□□ 0.83
SNHG4-201ENST00000448190 HSPA2P54652 639 aa20.21■□□□□ 0.83
SNHG4-201ENST00000448190 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
SNHG4-201ENST00000448190 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
SNHG4-201ENST00000448190 CROCC2H7BZ55 1655 aa20.2■□□□□ 0.82
SNHG4-201ENST00000448190 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
SNHG4-201ENST00000448190 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
SNHG4-201ENST00000448190 KANK1Q14678 1352 aa20.15■□□□□ 0.82
SNHG4-201ENST00000448190 CLTCQ00610 1675 aaKnown RBP20.13■□□□□ 0.81
SNHG4-201ENST00000448190 KDM5DQ9BY66 1539 aa20.1■□□□□ 0.81
SNHG4-201ENST00000448190 ABCC3O15438 1527 aa20.09■□□□□ 0.81
SNHG4-201ENST00000448190 NUP155O75694 1391 aa20.08■□□□□ 0.81
SNHG4-201ENST00000448190 C3P01024 1663 aa20.08■□□□□ 0.81
SNHG4-201ENST00000448190 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
SNHG4-201ENST00000448190 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
SNHG4-201ENST00000448190 EIF2AK4Q9P2K8 1649 aaKnown RBP20.08■□□□□ 0.8
SNHG4-201ENST00000448190 NAIPQ13075 1403 aa20.08■□□□□ 0.8
SNHG4-201ENST00000448190 LMTK3Q96Q04 1460 aa20.07■□□□□ 0.8
SNHG4-201ENST00000448190 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
SNHG4-201ENST00000448190 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
SNHG4-201ENST00000448190 TNRQ92752 1358 aa20.07■□□□□ 0.8
SNHG4-201ENST00000448190 NPATQ14207 1427 aa20.06■□□□□ 0.8
SNHG4-201ENST00000448190 PZPP20742 1482 aa20.05■□□□□ 0.8
SNHG4-201ENST00000448190 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.79
SNHG4-201ENST00000448190 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
SNHG4-201ENST00000448190 MROH2AA6NES4 1674 aa20■□□□□ 0.79
SNHG4-201ENST00000448190 FAM135AQ9P2D6 1515 aa19.99■□□□□ 0.79
SNHG4-201ENST00000448190 ARHGAP31Q2M1Z3 1444 aa19.98■□□□□ 0.79
SNHG4-201ENST00000448190 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
SNHG4-201ENST00000448190 DEPDC5O75140 1603 aa19.97■□□□□ 0.79
SNHG4-201ENST00000448190 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
SNHG4-201ENST00000448190 IDI1Q13907 227 aa19.96■□□□□ 0.79
SNHG4-201ENST00000448190 ERVK-7P63135 1459 aa19.96■□□□□ 0.79
SNHG4-201ENST00000448190 CEP152O94986 1710 aa19.96■□□□□ 0.79
SNHG4-201ENST00000448190 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
SNHG4-201ENST00000448190 THEMISQ8N1K5 641 aaPredicted RBP19.94■□□□□ 0.78
SNHG4-201ENST00000448190 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SNHG4-201ENST00000448190 STAG3Q9UJ98 1225 aa19.94■□□□□ 0.78
SNHG4-201ENST00000448190 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
SNHG4-201ENST00000448190 PKD2Q13563 968 aa19.93■□□□□ 0.78
SNHG4-201ENST00000448190 CAMSAP1Q5T5Y3 1602 aa19.92■□□□□ 0.78
SNHG4-201ENST00000448190 FOXD1Q16676 465 aa19.92■□□□□ 0.78
SNHG4-201ENST00000448190 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
SNHG4-201ENST00000448190 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
SNHG4-201ENST00000448190 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
SNHG4-201ENST00000448190 ZC3H13Q5T200 1668 aaKnown RBP19.91■□□□□ 0.78
SNHG4-201ENST00000448190 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
SNHG4-201ENST00000448190 UNC13BO14795 1591 aa19.89■□□□□ 0.77
SNHG4-201ENST00000448190 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 NLRP1Q9C000 1473 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 NOS1P29475 1434 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 SLC52A1Q9NWF4 448 aa19.88■□□□□ 0.77
SNHG4-201ENST00000448190 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
SNHG4-201ENST00000448190 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
SNHG4-201ENST00000448190 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
SNHG4-201ENST00000448190 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
SNHG4-201ENST00000448190 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
SNHG4-201ENST00000448190 CFAP65Q6ZU64 1925 aaKnown RBP19.86■□□□□ 0.77
SNHG4-201ENST00000448190 MYO3AQ8NEV4 1616 aa19.85■□□□□ 0.77
SNHG4-201ENST00000448190 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.77
SNHG4-201ENST00000448190 LTKP29376 864 aa19.83■□□□□ 0.77
SNHG4-201ENST00000448190 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
SNHG4-201ENST00000448190 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
SNHG4-201ENST00000448190 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
SNHG4-201ENST00000448190 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
SNHG4-201ENST00000448190 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
SNHG4-201ENST00000448190 TET3O43151 1660 aa19.81■□□□□ 0.76
SNHG4-201ENST00000448190 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
SNHG4-201ENST00000448190 SYNMO15061 1565 aa19.79■□□□□ 0.76
SNHG4-201ENST00000448190 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
SNHG4-201ENST00000448190 E9PCH4 1651 aa19.77■□□□□ 0.76
SNHG4-201ENST00000448190 HRCP23327 699 aa19.76■□□□□ 0.75
SNHG4-201ENST00000448190 PTPRTO14522 1441 aa19.76■□□□□ 0.75
SNHG4-201ENST00000448190 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
SNHG4-201ENST00000448190 TMEM2Q9UHN6 1383 aa19.75■□□□□ 0.75
SNHG4-201ENST00000448190 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
SNHG4-201ENST00000448190 BCANQ96GW7 911 aa19.75■□□□□ 0.75
SNHG4-201ENST00000448190 STRCQ7RTU9 1775 aa19.74■□□□□ 0.75
SNHG4-201ENST00000448190 ZNF142P52746 1687 aaPredicted RBP19.74■□□□□ 0.75
SNHG4-201ENST00000448190 ACIN1Q9UKV3 1341 aaKnown RBP19.74■□□□□ 0.75
SNHG4-201ENST00000448190 PIK3C2BO00750 1634 aa19.73■□□□□ 0.75
SNHG4-201ENST00000448190 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
SNHG4-201ENST00000448190 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
SNHG4-201ENST00000448190 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
SNHG4-201ENST00000448190 SLC26A8Q96RN1 970 aa19.7■□□□□ 0.74
SNHG4-201ENST00000448190 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
SNHG4-201ENST00000448190 RGL3Q3MIN7 710 aa19.69■□□□□ 0.74
SNHG4-201ENST00000448190 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
SNHG4-201ENST00000448190 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
SNHG4-201ENST00000448190 UBR1Q8IWV7 1749 aa19.67■□□□□ 0.74
SNHG4-201ENST00000448190 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
SNHG4-201ENST00000448190 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNHG4-201ENST00000448190 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
SNHG4-201ENST00000448190 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
SNHG4-201ENST00000448190 SLIT1O75093 1534 aa19.65■□□□□ 0.74
SNHG4-201ENST00000448190 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms