RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ACIN1Q9UKV3 1341 aaKnown RBP36.33■■■■□ 3.41
RFFL-206ENST00000447669 UNC13BO14795 1591 aa36.33■■■■□ 3.41
RFFL-206ENST00000447669 PKD2Q13563 968 aa36.32■■■■□ 3.41
RFFL-206ENST00000447669 A2MP01023 1474 aa36.32■■■■□ 3.4
RFFL-206ENST00000447669 KDM5DQ9BY66 1539 aa36.3■■■■□ 3.4
RFFL-206ENST00000447669 DIP2CQ9Y2E4 1556 aa36.29■■■■□ 3.4
RFFL-206ENST00000447669 FAM135AQ9P2D6 1515 aa36.28■■■■□ 3.4
RFFL-206ENST00000447669 ZMYM4Q5VZL5 1548 aa36.24■■■■□ 3.39
RFFL-206ENST00000447669 MAGI2Q86UL8 1455 aa36.23■■■■□ 3.39
RFFL-206ENST00000447669 ANKRD30BQ9BXX2 1392 aa36.21■■■■□ 3.39
RFFL-206ENST00000447669 IQGAP3Q86VI3 1631 aa36.19■■■■□ 3.38
RFFL-206ENST00000447669 EIF2AK4Q9P2K8 1649 aaKnown RBP36.19■■■■□ 3.38
RFFL-206ENST00000447669 DEPDC5O75140 1603 aa36.18■■■■□ 3.38
RFFL-206ENST00000447669 MROH1Q8NDA8 1641 aa36.16■■■■□ 3.38
RFFL-206ENST00000447669 GGT6Q6P531 493 aa36.15■■■■□ 3.38
RFFL-206ENST00000447669 ATP10AO60312 1499 aa36.08■■■■□ 3.37
RFFL-206ENST00000447669 PRDM15P57071 1507 aaPredicted RBP36.07■■■■□ 3.36
RFFL-206ENST00000447669 RNF17Q9BXT8 1623 aaKnown RBP36.05■■■■□ 3.36
RFFL-206ENST00000447669 KANK1Q14678 1352 aa36.05■■■■□ 3.36
RFFL-206ENST00000447669 VWDEQ8N2E2 1590 aa36.05■■■■□ 3.36
RFFL-206ENST00000447669 SIGLEC1Q9BZZ2 1709 aa36.04■■■■□ 3.36
RFFL-206ENST00000447669 TONSLQ96HA7 1378 aa36.02■■■■□ 3.36
RFFL-206ENST00000447669 BCORL1Q5H9F3 1711 aa36.01■■■■□ 3.36
RFFL-206ENST00000447669 CEP152O94986 1710 aa36.01■■■■□ 3.35
RFFL-206ENST00000447669 E9PCH4 1651 aa36■■■■□ 3.35
RFFL-206ENST00000447669 ARHGEF40Q8TER5 1519 aa35.99■■■■□ 3.35
RFFL-206ENST00000447669 RPRD2Q5VT52 1461 aaKnown RBP35.98■■■■□ 3.35
RFFL-206ENST00000447669 PLA2R1Q13018 1463 aa35.97■■■■□ 3.35
RFFL-206ENST00000447669 TET3O43151 1660 aa35.95■■■■□ 3.35
RFFL-206ENST00000447669 WASHC2CQ9Y4E1 1318 aa35.93■■■■□ 3.34
RFFL-206ENST00000447669 MLECQ14165 292 aa35.91■■■■□ 3.34
RFFL-206ENST00000447669 TIMELESSQ9UNS1 1208 aa35.91■■■■□ 3.34
RFFL-206ENST00000447669 L3MBTL2Q969R5 705 aa35.9■■■■□ 3.34
RFFL-206ENST00000447669 CFAP65Q6ZU64 1925 aaKnown RBP35.89■■■■□ 3.34
RFFL-206ENST00000447669 REREQ9P2R6 1566 aa35.89■■■■□ 3.34
RFFL-206ENST00000447669 PPP1R15AO75807 674 aaPredicted RBP35.88■■■■□ 3.33
RFFL-206ENST00000447669 ABCC3O15438 1527 aa35.86■■■■□ 3.33
RFFL-206ENST00000447669 EFCAB6Q5THR3 1501 aa35.85■■■■□ 3.33
RFFL-206ENST00000447669 LMTK2Q8IWU2 1503 aa35.84■■■■□ 3.33
RFFL-206ENST00000447669 AGLP35573 1532 aa35.83■■■■□ 3.33
RFFL-206ENST00000447669 CCDC144AA2RUR9 1427 aa35.82■■■■□ 3.33
RFFL-206ENST00000447669 ARID4BQ4LE39 1312 aaPredicted RBP35.8■■■■□ 3.32
RFFL-206ENST00000447669 SPHKAPQ2M3C7 1700 aa35.79■■■■□ 3.32
RFFL-206ENST00000447669 NPATQ14207 1427 aa35.78■■■■□ 3.32
RFFL-206ENST00000447669 CAMSAP1Q5T5Y3 1602 aa35.77■■■■□ 3.32
RFFL-206ENST00000447669 PTPRTO14522 1441 aa35.75■■■■□ 3.31
RFFL-206ENST00000447669 RGL3Q3MIN7 710 aa35.73■■■■□ 3.31
RFFL-206ENST00000447669 UGGT1Q9NYU2 1555 aa35.72■■■■□ 3.31
RFFL-206ENST00000447669 TRPM2O94759 1503 aa35.72■■■■□ 3.31
RFFL-206ENST00000447669 CLTCL1P53675 1640 aa35.69■■■■□ 3.3
RFFL-206ENST00000447669 ZC3H13Q5T200 1668 aaKnown RBP35.69■■■■□ 3.3
RFFL-206ENST00000447669 CLTCQ00610 1675 aaKnown RBP35.67■■■■□ 3.3
RFFL-206ENST00000447669 NBPF8Q3BBV2 869 aa35.66■■■■□ 3.3
RFFL-206ENST00000447669 KDM2AQ9Y2K7 1162 aa35.66■■■■□ 3.3
RFFL-206ENST00000447669 DCAF11Q8TEB1 546 aa35.62■■■■□ 3.29
RFFL-206ENST00000447669 ZNF326Q5BKZ1 582 aaKnown RBP35.62■■■■□ 3.29
RFFL-206ENST00000447669 FBXO31Q5XUX0 539 aaPredicted RBP35.61■■■■□ 3.29
RFFL-206ENST00000447669 ARHGAP31Q2M1Z3 1444 aa35.58■■■■□ 3.29
RFFL-206ENST00000447669 PPP6R1Q9UPN7 881 aa35.57■■■■□ 3.29
RFFL-206ENST00000447669 SPATA31E1Q6ZUB1 1445 aa35.56■■■■□ 3.28
RFFL-206ENST00000447669 NOS1P29475 1434 aa35.54■■■■□ 3.28
RFFL-206ENST00000447669 ZNF316A6NFI3 1004 aaPredicted RBP35.54■■■■□ 3.28
RFFL-206ENST00000447669 SYNMO15061 1565 aa35.54■■■■□ 3.28
RFFL-206ENST00000447669 ESF1Q9H501 851 aaKnown RBP35.53■■■■□ 3.28
RFFL-206ENST00000447669 PREX1Q8TCU6 1659 aa35.51■■■■□ 3.28
RFFL-206ENST00000447669 CNTLNQ9NXG0 1405 aa35.51■■■■□ 3.28
RFFL-206ENST00000447669 CHGAP10645 457 aaKnown RBP35.5■■■■□ 3.27
RFFL-206ENST00000447669 HIRIP3Q9BW71 556 aaPredicted RBP35.5■■■■□ 3.27
RFFL-206ENST00000447669 KIF1BO60333 1816 aa35.48■■■■□ 3.27
RFFL-206ENST00000447669 ZMYM3Q14202 1370 aa35.47■■■■□ 3.27
RFFL-206ENST00000447669 MROH2AA6NES4 1674 aa35.47■■■■□ 3.27
RFFL-206ENST00000447669 IDI1Q13907 227 aa35.44■■■■□ 3.26
RFFL-206ENST00000447669 ERVK-7P63135 1459 aa35.43■■■■□ 3.26
RFFL-206ENST00000447669 PIK3C2BO00750 1634 aa35.4■■■■□ 3.26
RFFL-206ENST00000447669 PLPPR3Q6T4P5 718 aa35.4■■■■□ 3.26
RFFL-206ENST00000447669 CEBPAP49715 358 aaPredicted RBP35.39■■■■□ 3.26
RFFL-206ENST00000447669 UHRF1BP1Q6BDS2 1440 aa35.39■■■■□ 3.26
RFFL-206ENST00000447669 PRAG1Q86YV5 1406 aa35.35■■■■□ 3.25
RFFL-206ENST00000447669 ADGRB3O60242 1522 aa35.35■■■■□ 3.25
RFFL-206ENST00000447669 FER1L4A9Z1Z3 1794 aa35.34■■■■□ 3.25
RFFL-206ENST00000447669 SPATA31D1Q6ZQQ2 1576 aa35.32■■■■□ 3.25
RFFL-206ENST00000447669 SLC52A1Q9NWF4 448 aa35.32■■■■□ 3.25
RFFL-206ENST00000447669 MYO5BQ9ULV0 1848 aa35.31■■■■□ 3.24
RFFL-206ENST00000447669 NUTM2DQ5VT03 806 aaPredicted RBP35.28■■■■□ 3.24
RFFL-206ENST00000447669 NEURL4Q96JN8 1562 aa35.28■■■■□ 3.24
RFFL-206ENST00000447669 NBPF1Q3BBV0 1214 aa35.27■■■■□ 3.24
RFFL-206ENST00000447669 HSPA5P11021 654 aaKnown RBP35.26■■■■□ 3.23
RFFL-206ENST00000447669 ADGRF5Q8IZF2 1346 aa35.25■■■■□ 3.23
RFFL-206ENST00000447669 RALGAPBQ86X10 1494 aa35.25■■■■□ 3.23
RFFL-206ENST00000447669 IFT172Q9UG01 1749 aa35.24■■■■□ 3.23
RFFL-206ENST00000447669 C3P01024 1663 aa35.24■■■■□ 3.23
RFFL-206ENST00000447669 TRPM1Q7Z4N2 1603 aa35.23■■■■□ 3.23
RFFL-206ENST00000447669 MADDQ8WXG6 1647 aa35.23■■■■□ 3.23
RFFL-206ENST00000447669 TMEM131LA2VDJ0 1609 aa35.22■■■■□ 3.23
RFFL-206ENST00000447669 EIF4G2P78344 907 aaKnown RBP eCLIP35.2■■■■□ 3.23
RFFL-206ENST00000447669 SENP3Q9H4L4 574 aaPredicted RBP35.2■■■■□ 3.23
RFFL-206ENST00000447669 CARD11Q9BXL7 1154 aa35.2■■■■□ 3.22
RFFL-206ENST00000447669 ROCK2O75116 1388 aaKnown RBP35.19■■■■□ 3.22
RFFL-206ENST00000447669 PPLO60437 1756 aa35.19■■■■□ 3.22
RFFL-206ENST00000447669 STAG3Q9UJ98 1225 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms