RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 RRBP1Q9P2E9 1410 aaKnown RBP24.91■■□□□ 1.58
CTSD-205ENST00000438213 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
CTSD-205ENST00000438213 ERBINQ96RT1 1412 aa24.88■■□□□ 1.57
CTSD-205ENST00000438213 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
CTSD-205ENST00000438213 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
CTSD-205ENST00000438213 EIF2AK4Q9P2K8 1649 aaKnown RBP24.84■■□□□ 1.57
CTSD-205ENST00000438213 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
CTSD-205ENST00000438213 FAM135AQ9P2D6 1515 aa24.82■■□□□ 1.56
CTSD-205ENST00000438213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.82■■□□□ 1.56
CTSD-205ENST00000438213 MROH2AA6NES4 1674 aa24.81■■□□□ 1.56
CTSD-205ENST00000438213 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
CTSD-205ENST00000438213 C3P01024 1663 aa24.8■■□□□ 1.56
CTSD-205ENST00000438213 KANK1Q14678 1352 aa24.8■■□□□ 1.56
CTSD-205ENST00000438213 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
CTSD-205ENST00000438213 KDM5DQ9BY66 1539 aa24.79■■□□□ 1.56
CTSD-205ENST00000438213 RNF17Q9BXT8 1623 aaKnown RBP24.79■■□□□ 1.56
CTSD-205ENST00000438213 NPATQ14207 1427 aa24.78■■□□□ 1.56
CTSD-205ENST00000438213 UHRF1BP1Q6BDS2 1440 aa24.74■■□□□ 1.55
CTSD-205ENST00000438213 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
CTSD-205ENST00000438213 FBXO31Q5XUX0 539 aaPredicted RBP24.72■■□□□ 1.55
CTSD-205ENST00000438213 ABCC3O15438 1527 aa24.71■■□□□ 1.55
CTSD-205ENST00000438213 HSPA2P54652 639 aa24.7■■□□□ 1.54
CTSD-205ENST00000438213 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
CTSD-205ENST00000438213 PZPP20742 1482 aa24.69■■□□□ 1.54
CTSD-205ENST00000438213 PRDM15P57071 1507 aaPredicted RBP24.68■■□□□ 1.54
CTSD-205ENST00000438213 ZC3H13Q5T200 1668 aaKnown RBP24.68■■□□□ 1.54
CTSD-205ENST00000438213 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
CTSD-205ENST00000438213 DEPDC5O75140 1603 aa24.65■■□□□ 1.54
CTSD-205ENST00000438213 TNRQ92752 1358 aa24.65■■□□□ 1.54
CTSD-205ENST00000438213 ARHGAP31Q2M1Z3 1444 aa24.62■■□□□ 1.53
CTSD-205ENST00000438213 CEP152O94986 1710 aa24.6■■□□□ 1.53
CTSD-205ENST00000438213 NAIPQ13075 1403 aa24.6■■□□□ 1.53
CTSD-205ENST00000438213 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
CTSD-205ENST00000438213 NUP155O75694 1391 aa24.59■■□□□ 1.53
CTSD-205ENST00000438213 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
CTSD-205ENST00000438213 CAMSAP1Q5T5Y3 1602 aa24.58■■□□□ 1.53
CTSD-205ENST00000438213 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
CTSD-205ENST00000438213 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
CTSD-205ENST00000438213 A2ML1A8K2U0 1454 aa24.54■■□□□ 1.52
CTSD-205ENST00000438213 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
CTSD-205ENST00000438213 UNC13BO14795 1591 aa24.54■■□□□ 1.52
CTSD-205ENST00000438213 CFAP65Q6ZU64 1925 aaKnown RBP24.53■■□□□ 1.52
CTSD-205ENST00000438213 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
CTSD-205ENST00000438213 THEMISQ8N1K5 641 aaPredicted RBP24.53■■□□□ 1.52
CTSD-205ENST00000438213 SPATA31D1Q6ZQQ2 1576 aa24.52■■□□□ 1.52
CTSD-205ENST00000438213 MYO3AQ8NEV4 1616 aa24.51■■□□□ 1.51
CTSD-205ENST00000438213 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
CTSD-205ENST00000438213 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
CTSD-205ENST00000438213 EFCAB6Q5THR3 1501 aa24.48■■□□□ 1.51
CTSD-205ENST00000438213 RPRD2Q5VT52 1461 aaKnown RBP24.48■■□□□ 1.51
CTSD-205ENST00000438213 GCC2Q8IWJ2 1684 aa24.47■■□□□ 1.51
CTSD-205ENST00000438213 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
CTSD-205ENST00000438213 PKD2Q13563 968 aa24.47■■□□□ 1.51
CTSD-205ENST00000438213 ZNF142P52746 1687 aaPredicted RBP24.46■■□□□ 1.51
CTSD-205ENST00000438213 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
CTSD-205ENST00000438213 TET3O43151 1660 aa24.46■■□□□ 1.51
CTSD-205ENST00000438213 STAG3Q9UJ98 1225 aa24.45■■□□□ 1.5
CTSD-205ENST00000438213 IQGAP3Q86VI3 1631 aa24.45■■□□□ 1.5
CTSD-205ENST00000438213 IDI1Q13907 227 aa24.44■■□□□ 1.5
CTSD-205ENST00000438213 NOS1P29475 1434 aa24.44■■□□□ 1.5
CTSD-205ENST00000438213 UGGT1Q9NYU2 1555 aa24.43■■□□□ 1.5
CTSD-205ENST00000438213 ANKLE2Q86XL3 938 aa24.43■■□□□ 1.5
CTSD-205ENST00000438213 NCKAP5LQ9HCH0 1330 aa24.42■■□□□ 1.5
CTSD-205ENST00000438213 PLA2R1Q13018 1463 aa24.42■■□□□ 1.5
CTSD-205ENST00000438213 SETD5Q9C0A6 1442 aa24.41■■□□□ 1.5
CTSD-205ENST00000438213 SLC4A1APQ9BWU0 796 aaKnown RBP24.39■■□□□ 1.49
CTSD-205ENST00000438213 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
CTSD-205ENST00000438213 PTPRTO14522 1441 aa24.37■■□□□ 1.49
CTSD-205ENST00000438213 E9PCH4 1651 aa24.34■■□□□ 1.49
CTSD-205ENST00000438213 SYNMO15061 1565 aa24.33■■□□□ 1.49
CTSD-205ENST00000438213 EID1Q9Y6B2 187 aa24.33■■□□□ 1.49
CTSD-205ENST00000438213 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
CTSD-205ENST00000438213 CHGAP10645 457 aaKnown RBP24.3■■□□□ 1.48
CTSD-205ENST00000438213 HRCP23327 699 aa24.3■■□□□ 1.48
CTSD-205ENST00000438213 MPHOSPH9Q99550 1183 aa24.3■■□□□ 1.48
CTSD-205ENST00000438213 HDGFP51858 240 aaKnown RBP24.29■■□□□ 1.48
CTSD-205ENST00000438213 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
CTSD-205ENST00000438213 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
CTSD-205ENST00000438213 UBR1Q8IWV7 1749 aa24.28■■□□□ 1.48
CTSD-205ENST00000438213 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
CTSD-205ENST00000438213 LTKP29376 864 aa24.25■■□□□ 1.47
CTSD-205ENST00000438213 KDM5AP29375 1690 aaKnown RBP24.24■■□□□ 1.47
CTSD-205ENST00000438213 SLIT1O75093 1534 aa24.24■■□□□ 1.47
CTSD-205ENST00000438213 ARHGAP23Q9P227 1491 aa24.23■■□□□ 1.47
CTSD-205ENST00000438213 ADGRB3O60242 1522 aa24.22■■□□□ 1.47
CTSD-205ENST00000438213 MED14O60244 1454 aa24.22■■□□□ 1.47
CTSD-205ENST00000438213 NPHP4O75161 1426 aaPredicted RBP24.22■■□□□ 1.47
CTSD-205ENST00000438213 SCAF11Q99590 1463 aaKnown RBP24.21■■□□□ 1.47
CTSD-205ENST00000438213 FOXD1Q16676 465 aa24.2■■□□□ 1.46
CTSD-205ENST00000438213 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.2■■□□□ 1.46
CTSD-205ENST00000438213 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
CTSD-205ENST00000438213 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
CTSD-205ENST00000438213 NEURL4Q96JN8 1562 aa24.17■■□□□ 1.46
CTSD-205ENST00000438213 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
CTSD-205ENST00000438213 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
CTSD-205ENST00000438213 ZNF326Q5BKZ1 582 aaKnown RBP24.16■■□□□ 1.46
CTSD-205ENST00000438213 CERKQ8TCT0 537 aa24.16■■□□□ 1.46
CTSD-205ENST00000438213 BCANQ96GW7 911 aa24.16■■□□□ 1.46
CTSD-205ENST00000438213 TMEM131LA2VDJ0 1609 aa24.16■■□□□ 1.46
CTSD-205ENST00000438213 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms