RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 RRBP1Q9P2E9 1410 aaKnown RBP21.82■■□□□ 1.08
CSNK1E-209ENST00000431632 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
CSNK1E-209ENST00000431632 ADGRL2O95490 1459 aa21.8■■□□□ 1.08
CSNK1E-209ENST00000431632 ERBINQ96RT1 1412 aa21.77■■□□□ 1.08
CSNK1E-209ENST00000431632 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-209ENST00000431632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
CSNK1E-209ENST00000431632 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
CSNK1E-209ENST00000431632 C3P01024 1663 aa21.74■■□□□ 1.07
CSNK1E-209ENST00000431632 EIF2AK4Q9P2K8 1649 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-209ENST00000431632 RNF17Q9BXT8 1623 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-209ENST00000431632 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
CSNK1E-209ENST00000431632 ANKRD50Q9ULJ7 1429 aa21.71■■□□□ 1.07
CSNK1E-209ENST00000431632 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
CSNK1E-209ENST00000431632 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
CSNK1E-209ENST00000431632 ILDR1Q86SU0 546 aaPredicted RBP21.69■■□□□ 1.06
CSNK1E-209ENST00000431632 LMTK3Q96Q04 1460 aa21.69■■□□□ 1.06
CSNK1E-209ENST00000431632 HSPA2P54652 639 aa21.68■■□□□ 1.06
CSNK1E-209ENST00000431632 MROH1Q8NDA8 1641 aa21.68■■□□□ 1.06
CSNK1E-209ENST00000431632 FAM135AQ9P2D6 1515 aa21.67■■□□□ 1.06
CSNK1E-209ENST00000431632 NPATQ14207 1427 aa21.67■■□□□ 1.06
CSNK1E-209ENST00000431632 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
CSNK1E-209ENST00000431632 ABCC3O15438 1527 aa21.66■■□□□ 1.06
CSNK1E-209ENST00000431632 KANK1Q14678 1352 aa21.64■■□□□ 1.06
CSNK1E-209ENST00000431632 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
CSNK1E-209ENST00000431632 PRDM15P57071 1507 aaPredicted RBP21.62■■□□□ 1.05
CSNK1E-209ENST00000431632 PZPP20742 1482 aa21.62■■□□□ 1.05
CSNK1E-209ENST00000431632 DEPDC5O75140 1603 aa21.61■■□□□ 1.05
CSNK1E-209ENST00000431632 PREX1Q8TCU6 1659 aa21.6■■□□□ 1.05
CSNK1E-209ENST00000431632 TNRQ92752 1358 aa21.58■■□□□ 1.04
CSNK1E-209ENST00000431632 ZC3H13Q5T200 1668 aaKnown RBP21.57■■□□□ 1.04
CSNK1E-209ENST00000431632 NAIPQ13075 1403 aa21.57■■□□□ 1.04
CSNK1E-209ENST00000431632 CEP152O94986 1710 aa21.57■■□□□ 1.04
CSNK1E-209ENST00000431632 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
CSNK1E-209ENST00000431632 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
CSNK1E-209ENST00000431632 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
CSNK1E-209ENST00000431632 LMTK2Q8IWU2 1503 aa21.54■■□□□ 1.04
CSNK1E-209ENST00000431632 NUP155O75694 1391 aa21.53■■□□□ 1.04
CSNK1E-209ENST00000431632 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
CSNK1E-209ENST00000431632 ERVK-7P63135 1459 aa21.52■■□□□ 1.03
CSNK1E-209ENST00000431632 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
CSNK1E-209ENST00000431632 UNC13BO14795 1591 aa21.49■■□□□ 1.03
CSNK1E-209ENST00000431632 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
CSNK1E-209ENST00000431632 MYO3AQ8NEV4 1616 aa21.48■■□□□ 1.03
CSNK1E-209ENST00000431632 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
CSNK1E-209ENST00000431632 CEP170BQ9Y4F5 1589 aaPredicted RBP21.46■■□□□ 1.03
CSNK1E-209ENST00000431632 NLRP1Q9C000 1473 aa21.45■■□□□ 1.03
CSNK1E-209ENST00000431632 TRIM52Q96A61 297 aa21.45■■□□□ 1.02
CSNK1E-209ENST00000431632 EFCAB6Q5THR3 1501 aa21.45■■□□□ 1.02
CSNK1E-209ENST00000431632 THEMISQ8N1K5 641 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-209ENST00000431632 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
CSNK1E-209ENST00000431632 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
CSNK1E-209ENST00000431632 IDI1Q13907 227 aa21.43■■□□□ 1.02
CSNK1E-209ENST00000431632 ZNF142P52746 1687 aaPredicted RBP21.42■■□□□ 1.02
CSNK1E-209ENST00000431632 IQGAP3Q86VI3 1631 aa21.42■■□□□ 1.02
CSNK1E-209ENST00000431632 TET3O43151 1660 aa21.41■■□□□ 1.02
CSNK1E-209ENST00000431632 NOS1P29475 1434 aa21.41■■□□□ 1.02
CSNK1E-209ENST00000431632 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
CSNK1E-209ENST00000431632 RPRD2Q5VT52 1461 aaKnown RBP21.4■■□□□ 1.02
CSNK1E-209ENST00000431632 STRCQ7RTU9 1775 aa21.4■■□□□ 1.02
CSNK1E-209ENST00000431632 UGGT1Q9NYU2 1555 aa21.39■■□□□ 1.01
CSNK1E-209ENST00000431632 PKD2Q13563 968 aa21.38■■□□□ 1.01
CSNK1E-209ENST00000431632 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
CSNK1E-209ENST00000431632 SETD5Q9C0A6 1442 aa21.38■■□□□ 1.01
CSNK1E-209ENST00000431632 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
CSNK1E-209ENST00000431632 PLA2R1Q13018 1463 aa21.36■■□□□ 1.01
CSNK1E-209ENST00000431632 E9PCH4 1651 aa21.36■■□□□ 1.01
CSNK1E-209ENST00000431632 SYNMO15061 1565 aa21.36■■□□□ 1.01
CSNK1E-209ENST00000431632 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
CSNK1E-209ENST00000431632 STAG3Q9UJ98 1225 aa21.35■■□□□ 1.01
CSNK1E-209ENST00000431632 PTPRTO14522 1441 aa21.32■■□□□ 1
CSNK1E-209ENST00000431632 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
CSNK1E-209ENST00000431632 PIK3C2BO00750 1634 aa21.29■■□□□ 1
CSNK1E-209ENST00000431632 LTKP29376 864 aa21.29■■□□□ 1
CSNK1E-209ENST00000431632 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
CSNK1E-209ENST00000431632 UBR1Q8IWV7 1749 aa21.29■■□□□ 1
CSNK1E-209ENST00000431632 CHGAP10645 457 aaKnown RBP21.28■■□□□ 1
CSNK1E-209ENST00000431632 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
CSNK1E-209ENST00000431632 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
CSNK1E-209ENST00000431632 FOXD1Q16676 465 aa21.27■■□□□ 1
CSNK1E-209ENST00000431632 TMEM2Q9UHN6 1383 aa21.25■□□□□ 0.99
CSNK1E-209ENST00000431632 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
CSNK1E-209ENST00000431632 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
CSNK1E-209ENST00000431632 HRCP23327 699 aa21.23■□□□□ 0.99
CSNK1E-209ENST00000431632 SLIT1O75093 1534 aa21.23■□□□□ 0.99
CSNK1E-209ENST00000431632 NEURL4Q96JN8 1562 aa21.22■□□□□ 0.99
CSNK1E-209ENST00000431632 ADGRB3O60242 1522 aa21.21■□□□□ 0.99
CSNK1E-209ENST00000431632 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
CSNK1E-209ENST00000431632 MED14O60244 1454 aa21.2■□□□□ 0.98
CSNK1E-209ENST00000431632 KDM5AP29375 1690 aaKnown RBP21.2■□□□□ 0.98
CSNK1E-209ENST00000431632 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
CSNK1E-209ENST00000431632 TMEM131LA2VDJ0 1609 aa21.18■□□□□ 0.98
CSNK1E-209ENST00000431632 SPHKAPQ2M3C7 1700 aa21.18■□□□□ 0.98
CSNK1E-209ENST00000431632 ZNF335Q9H4Z2 1342 aaPredicted RBP21.18■□□□□ 0.98
CSNK1E-209ENST00000431632 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
CSNK1E-209ENST00000431632 HDGFP51858 240 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-209ENST00000431632 FBXO41Q8TF61 875 aa21.17■□□□□ 0.98
CSNK1E-209ENST00000431632 TRPM2O94759 1503 aa21.15■□□□□ 0.98
CSNK1E-209ENST00000431632 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
CSNK1E-209ENST00000431632 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-209ENST00000431632 CERKQ8TCT0 537 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms