RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
NEDD4L-206ENST00000431212 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
NEDD4L-206ENST00000431212 NUP155O75694 1391 aa13.54□□□□□ -0.24
NEDD4L-206ENST00000431212 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
NEDD4L-206ENST00000431212 NUP153P49790 1475 aaKnown RBP13.53□□□□□ -0.24
NEDD4L-206ENST00000431212 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
NEDD4L-206ENST00000431212 FRAT1Q92837 279 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-206ENST00000431212 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
NEDD4L-206ENST00000431212 E9PCH4 1651 aa13.51□□□□□ -0.25
NEDD4L-206ENST00000431212 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 KIAA0586Q9BVV6 1533 aa13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
NEDD4L-206ENST00000431212 INSRP06213 1382 aa13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 PER1O15534 1290 aaPredicted RBP13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 CC2D1BQ5T0F9 858 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-206ENST00000431212 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
NEDD4L-206ENST00000431212 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
NEDD4L-206ENST00000431212 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
NEDD4L-206ENST00000431212 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
NEDD4L-206ENST00000431212 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
NEDD4L-206ENST00000431212 PLEKHH2Q8IVE3 1493 aa13.47□□□□□ -0.25
NEDD4L-206ENST00000431212 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
NEDD4L-206ENST00000431212 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
NEDD4L-206ENST00000431212 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.25
NEDD4L-206ENST00000431212 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
NEDD4L-206ENST00000431212 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
NEDD4L-206ENST00000431212 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
NEDD4L-206ENST00000431212 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
NEDD4L-206ENST00000431212 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
NEDD4L-206ENST00000431212 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-206ENST00000431212 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
NEDD4L-206ENST00000431212 PANK3Q9H999 370 aa13.43□□□□□ -0.26
NEDD4L-206ENST00000431212 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
NEDD4L-206ENST00000431212 RGS3P49796 1198 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 ADAMTS8Q9UP79 889 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
NEDD4L-206ENST00000431212 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
NEDD4L-206ENST00000431212 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 DUSP27Q5VZP5 1158 aa13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
NEDD4L-206ENST00000431212 TMF1P82094 1093 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 PTPRGP23470 1445 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 TESK2Q96S53 571 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
NEDD4L-206ENST00000431212 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
NEDD4L-206ENST00000431212 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
NEDD4L-206ENST00000431212 ERBINQ96RT1 1412 aa13.36□□□□□ -0.27
NEDD4L-206ENST00000431212 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
NEDD4L-206ENST00000431212 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
NEDD4L-206ENST00000431212 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
NEDD4L-206ENST00000431212 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-206ENST00000431212 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■□□ 19.2
NEDD4L-206ENST00000431212 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.28
NEDD4L-206ENST00000431212 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
NEDD4L-206ENST00000431212 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
NEDD4L-206ENST00000431212 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
NEDD4L-206ENST00000431212 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
NEDD4L-206ENST00000431212 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-206ENST00000431212 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-206ENST00000431212 BECN1Q14457 450 aa13.32□□□□□ -0.28
NEDD4L-206ENST00000431212 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
NEDD4L-206ENST00000431212 A2MP01023 1474 aa13.3□□□□□ -0.28
NEDD4L-206ENST00000431212 LAMC1P11047 1609 aa13.3□□□□□ -0.28
NEDD4L-206ENST00000431212 POGKQ9P215 609 aa13.29□□□□□ -0.28
NEDD4L-206ENST00000431212 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
NEDD4L-206ENST00000431212 L1TD1Q5T7N2 865 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-206ENST00000431212 MAGI1Q96QZ7 1491 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-206ENST00000431212 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
NEDD4L-206ENST00000431212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■□□□ 14
NEDD4L-206ENST00000431212 USP19O94966 1318 aa13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 IFT140Q96RY7 1462 aa13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 TRMT2AQ8IZ69 625 aaKnown RBP13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 EIF2AK4Q9P2K8 1649 aaKnown RBP13.27□□□□□ -0.28
NEDD4L-206ENST00000431212 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-206ENST00000431212 BCAR3O75815 825 aa13.27□□□□□ -0.29
NEDD4L-206ENST00000431212 IGHDP01880 384 aa13.27□□□□□ -0.29
NEDD4L-206ENST00000431212 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
NEDD4L-206ENST00000431212 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
NEDD4L-206ENST00000431212 ARHGEF5Q12774 1597 aa13.26□□□□□ -0.29
NEDD4L-206ENST00000431212 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
NEDD4L-206ENST00000431212 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms