RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
CDK12-201ENST00000430627 HNRNPMP52272 730 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDK12-201ENST00000430627 CHMP4AQ9BY43 222 aa16.77■□□□□ 0.28
CDK12-201ENST00000430627 TRIM6-TRIM34B2RNG4 842 aa16.77■□□□□ 0.27
CDK12-201ENST00000430627 WWC2Q6AWC2 1192 aa16.77■□□□□ 0.27
CDK12-201ENST00000430627 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
CDK12-201ENST00000430627 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
CDK12-201ENST00000430627 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
CDK12-201ENST00000430627 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
CDK12-201ENST00000430627 TEFQ10587 303 aa16.75■□□□□ 0.27
CDK12-201ENST00000430627 MTMR7Q9Y216 660 aa16.75■□□□□ 0.27
CDK12-201ENST00000430627 EIF2S2P20042 333 aaKnown RBP16.75■□□□□ 0.27
CDK12-201ENST00000430627 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
CDK12-201ENST00000430627 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
CDK12-201ENST00000430627 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
CDK12-201ENST00000430627 PES1O00541 588 aaKnown RBP16.74■□□□□ 0.27
CDK12-201ENST00000430627 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
CDK12-201ENST00000430627 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDK12-201ENST00000430627 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
CDK12-201ENST00000430627 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
CDK12-201ENST00000430627 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
CDK12-201ENST00000430627 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
CDK12-201ENST00000430627 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
CDK12-201ENST00000430627 SPRYD3Q8NCJ5 442 aa16.71■□□□□ 0.26
CDK12-201ENST00000430627 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
CDK12-201ENST00000430627 APPP05067 770 aa16.7■□□□□ 0.26
CDK12-201ENST00000430627 TMEM87AQ8NBN3 555 aa16.7■□□□□ 0.26
CDK12-201ENST00000430627 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
CDK12-201ENST00000430627 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
CDK12-201ENST00000430627 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
CDK12-201ENST00000430627 COG3Q96JB2 828 aa16.69■□□□□ 0.26
CDK12-201ENST00000430627 PLIN1O60240 522 aa16.68■□□□□ 0.26
CDK12-201ENST00000430627 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
CDK12-201ENST00000430627 PKD2Q13563 968 aa16.68■□□□□ 0.26
CDK12-201ENST00000430627 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
CDK12-201ENST00000430627 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
CDK12-201ENST00000430627 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
CDK12-201ENST00000430627 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
CDK12-201ENST00000430627 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
CDK12-201ENST00000430627 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
CDK12-201ENST00000430627 CUX2O14529 1486 aa16.65■□□□□ 0.26
CDK12-201ENST00000430627 MINK1Q8N4C8 1332 aaPredicted RBP16.65■□□□□ 0.26
CDK12-201ENST00000430627 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.25
CDK12-201ENST00000430627 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
CDK12-201ENST00000430627 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
CDK12-201ENST00000430627 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
CDK12-201ENST00000430627 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
CDK12-201ENST00000430627 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
CDK12-201ENST00000430627 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
CDK12-201ENST00000430627 TPD52L1Q16890 204 aaPredicted RBP16.6■□□□□ 0.25
CDK12-201ENST00000430627 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
CDK12-201ENST00000430627 ATP2B2Q01814 1243 aa16.6■□□□□ 0.25
CDK12-201ENST00000430627 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
CDK12-201ENST00000430627 DDX54Q8TDD1 881 aaKnown RBP16.58■□□□□ 0.25
CDK12-201ENST00000430627 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
CDK12-201ENST00000430627 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
CDK12-201ENST00000430627 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
CDK12-201ENST00000430627 CA8P35219 290 aa16.58■□□□□ 0.24
CDK12-201ENST00000430627 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
CDK12-201ENST00000430627 TPM4P67936 248 aa16.57■□□□□ 0.24
CDK12-201ENST00000430627 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
CDK12-201ENST00000430627 NUP155O75694 1391 aa16.57■□□□□ 0.24
CDK12-201ENST00000430627 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
CDK12-201ENST00000430627 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
CDK12-201ENST00000430627 AIMP1Q12904 312 aaKnown RBP16.57■□□□□ 0.24
CDK12-201ENST00000430627 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
CDK12-201ENST00000430627 MIER1Q8N108 512 aa16.56■□□□□ 0.24
CDK12-201ENST00000430627 SOGA1O94964 1423 aa16.56■□□□□ 0.24
CDK12-201ENST00000430627 LMOD3Q0VAK6 560 aa16.55■□□□□ 0.24
CDK12-201ENST00000430627 HMMRO75330 724 aa16.55■□□□□ 0.24
CDK12-201ENST00000430627 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK12-201ENST00000430627 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
CDK12-201ENST00000430627 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
CDK12-201ENST00000430627 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
CDK12-201ENST00000430627 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
CDK12-201ENST00000430627 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
CDK12-201ENST00000430627 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
CDK12-201ENST00000430627 MAP3K9P80192 1104 aa16.53■□□□□ 0.24
CDK12-201ENST00000430627 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
CDK12-201ENST00000430627 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
CDK12-201ENST00000430627 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
CDK12-201ENST00000430627 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
CDK12-201ENST00000430627 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
CDK12-201ENST00000430627 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
CDK12-201ENST00000430627 BCL11BQ9C0K0 894 aaPredicted RBP16.51■□□□□ 0.23
CDK12-201ENST00000430627 ERICH2A1L162 156 aa16.51■□□□□ 0.23
CDK12-201ENST00000430627 CCDC146Q8IYE0 955 aa16.51■□□□□ 0.23
CDK12-201ENST00000430627 TPM2P07951 284 aa16.5■□□□□ 0.23
CDK12-201ENST00000430627 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
CDK12-201ENST00000430627 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
CDK12-201ENST00000430627 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
CDK12-201ENST00000430627 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
CDK12-201ENST00000430627 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
CDK12-201ENST00000430627 RIC3Q7Z5B4 369 aa16.48■□□□□ 0.23
CDK12-201ENST00000430627 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
CDK12-201ENST00000430627 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
CDK12-201ENST00000430627 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
CDK12-201ENST00000430627 KDM4AO75164 1064 aa16.47■□□□□ 0.23
CDK12-201ENST00000430627 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
CDK12-201ENST00000430627 CCDC97Q96F63 343 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms