RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PPP1R15AO75807 674 aaPredicted RBP31.85■■■□□ 2.69
VSX1-205ENST00000429762 RICTORQ6R327 1708 aa31.85■■■□□ 2.69
VSX1-205ENST00000429762 RPRD2Q5VT52 1461 aaKnown RBP31.84■■■□□ 2.69
VSX1-205ENST00000429762 MLH3Q9UHC1 1453 aa31.82■■■□□ 2.69
VSX1-205ENST00000429762 DHX29Q7Z478 1369 aaKnown RBP31.82■■■□□ 2.68
VSX1-205ENST00000429762 ABCA6Q8N139 1617 aa31.81■■■□□ 2.68
VSX1-205ENST00000429762 FRMPD1Q5SYB0 1578 aa31.78■■■□□ 2.68
VSX1-205ENST00000429762 KIF3BO15066 747 aa31.78■■■□□ 2.68
VSX1-205ENST00000429762 DEPDC5O75140 1603 aa31.77■■■□□ 2.68
VSX1-205ENST00000429762 A2MP01023 1474 aa31.77■■■□□ 2.68
VSX1-205ENST00000429762 EIF2AK4Q9P2K8 1649 aaKnown RBP31.76■■■□□ 2.67
VSX1-205ENST00000429762 TEX14Q8IWB6 1497 aa31.75■■■□□ 2.67
VSX1-205ENST00000429762 L3MBTL2Q969R5 705 aa31.74■■■□□ 2.67
VSX1-205ENST00000429762 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
VSX1-205ENST00000429762 DIP2CQ9Y2E4 1556 aa31.71■■■□□ 2.67
VSX1-205ENST00000429762 YEATS2Q9ULM3 1422 aa31.69■■■□□ 2.66
VSX1-205ENST00000429762 PRDM15P57071 1507 aaPredicted RBP31.66■■■□□ 2.66
VSX1-205ENST00000429762 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
VSX1-205ENST00000429762 E9PCH4 1651 aa31.65■■■□□ 2.66
VSX1-205ENST00000429762 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.66
VSX1-205ENST00000429762 KANK1Q14678 1352 aa31.63■■■□□ 2.65
VSX1-205ENST00000429762 RNF17Q9BXT8 1623 aaKnown RBP31.61■■■□□ 2.65
VSX1-205ENST00000429762 ZMYM4Q5VZL5 1548 aa31.61■■■□□ 2.65
VSX1-205ENST00000429762 TET3O43151 1660 aa31.6■■■□□ 2.65
VSX1-205ENST00000429762 DIEXFQ68CQ4 756 aaKnown RBP31.58■■■□□ 2.65
VSX1-205ENST00000429762 COL17A1Q9UMD9 1497 aaPredicted RBP31.58■■■□□ 2.65
VSX1-205ENST00000429762 CEP152O94986 1710 aa31.58■■■□□ 2.65
VSX1-205ENST00000429762 CCDC144AA2RUR9 1427 aa31.57■■■□□ 2.64
VSX1-205ENST00000429762 GGT6Q6P531 493 aa31.56■■■□□ 2.64
VSX1-205ENST00000429762 NBPF8Q3BBV2 869 aa31.54■■■□□ 2.64
VSX1-205ENST00000429762 BCORL1Q5H9F3 1711 aa31.54■■■□□ 2.64
VSX1-205ENST00000429762 HIRIP3Q9BW71 556 aaPredicted RBP31.53■■■□□ 2.64
VSX1-205ENST00000429762 ATP10AO60312 1499 aa31.52■■■□□ 2.64
VSX1-205ENST00000429762 SPHKAPQ2M3C7 1700 aa31.5■■■□□ 2.63
VSX1-205ENST00000429762 EFCAB6Q5THR3 1501 aa31.47■■■□□ 2.63
VSX1-205ENST00000429762 ZNF326Q5BKZ1 582 aaKnown RBP31.47■■■□□ 2.63
VSX1-205ENST00000429762 DNAJC5Q9H3Z4 198 aa31.47■■■□□ 2.63
VSX1-205ENST00000429762 LMTK2Q8IWU2 1503 aa31.45■■■□□ 2.62
VSX1-205ENST00000429762 TRPM2O94759 1503 aa31.44■■■□□ 2.62
VSX1-205ENST00000429762 RGL3Q3MIN7 710 aa31.44■■■□□ 2.62
VSX1-205ENST00000429762 KDM2AQ9Y2K7 1162 aa31.43■■■□□ 2.62
VSX1-205ENST00000429762 TRHP20396 242 aaPredicted RBP31.43■■■□□ 2.62
VSX1-205ENST00000429762 ABCC3O15438 1527 aa31.42■■■□□ 2.62
VSX1-205ENST00000429762 PTPRTO14522 1441 aa31.42■■■□□ 2.62
VSX1-205ENST00000429762 CLTCL1P53675 1640 aa31.41■■■□□ 2.62
VSX1-205ENST00000429762 DCAF11Q8TEB1 546 aa31.4■■■□□ 2.62
VSX1-205ENST00000429762 WASHC2CQ9Y4E1 1318 aa31.39■■■□□ 2.62
VSX1-205ENST00000429762 SIGLEC1Q9BZZ2 1709 aa31.39■■■□□ 2.62
VSX1-205ENST00000429762 UGGT1Q9NYU2 1555 aa31.37■■■□□ 2.61
VSX1-205ENST00000429762 CFAP65Q6ZU64 1925 aaKnown RBP31.36■■■□□ 2.61
VSX1-205ENST00000429762 CAMSAP1Q5T5Y3 1602 aa31.35■■■□□ 2.61
VSX1-205ENST00000429762 ARHGEF40Q8TER5 1519 aa31.35■■■□□ 2.61
VSX1-205ENST00000429762 NPATQ14207 1427 aa31.34■■■□□ 2.61
VSX1-205ENST00000429762 UHRF1BP1Q6BDS2 1440 aa31.32■■■□□ 2.6
VSX1-205ENST00000429762 HSPA5P11021 654 aaKnown RBP31.32■■■□□ 2.6
VSX1-205ENST00000429762 REREQ9P2R6 1566 aa31.31■■■□□ 2.6
VSX1-205ENST00000429762 SPATA31E1Q6ZUB1 1445 aa31.3■■■□□ 2.6
VSX1-205ENST00000429762 ZC3H13Q5T200 1668 aaKnown RBP31.27■■■□□ 2.6
VSX1-205ENST00000429762 EIF4G2P78344 907 aaKnown RBP eCLIP31.25■■■□□ 2.59
VSX1-205ENST00000429762 AGLP35573 1532 aa31.25■■■□□ 2.59
VSX1-205ENST00000429762 MLECQ14165 292 aa31.23■■■□□ 2.59
VSX1-205ENST00000429762 RALGAPBQ86X10 1494 aa31.23■■■□□ 2.59
VSX1-205ENST00000429762 PRAG1Q86YV5 1406 aa31.22■■■□□ 2.59
VSX1-205ENST00000429762 MROH2AA6NES4 1674 aa31.19■■■□□ 2.58
VSX1-205ENST00000429762 KIF1BO60333 1816 aa31.19■■■□□ 2.58
VSX1-205ENST00000429762 TRPM1Q7Z4N2 1603 aa31.17■■■□□ 2.58
VSX1-205ENST00000429762 CNTLNQ9NXG0 1405 aa31.16■■■□□ 2.58
VSX1-205ENST00000429762 SYNMO15061 1565 aa31.15■■■□□ 2.58
VSX1-205ENST00000429762 CLTCQ00610 1675 aaKnown RBP31.15■■■□□ 2.58
VSX1-205ENST00000429762 DDX10Q13206 875 aaKnown RBP31.15■■■□□ 2.58
VSX1-205ENST00000429762 MIER1Q8N108 512 aa31.15■■■□□ 2.58
VSX1-205ENST00000429762 NOS1P29475 1434 aa31.14■■■□□ 2.58
VSX1-205ENST00000429762 ARHGAP31Q2M1Z3 1444 aa31.14■■■□□ 2.58
VSX1-205ENST00000429762 CHGAP10645 457 aaKnown RBP31.13■■■□□ 2.57
VSX1-205ENST00000429762 USP47Q96K76 1375 aa31.12■■■□□ 2.57
VSX1-205ENST00000429762 CARD11Q9BXL7 1154 aa31.12■■■□□ 2.57
VSX1-205ENST00000429762 ROCK2O75116 1388 aaKnown RBP31.1■■■□□ 2.57
VSX1-205ENST00000429762 PREX1Q8TCU6 1659 aa31.1■■■□□ 2.57
VSX1-205ENST00000429762 MADDQ8WXG6 1647 aa31.1■■■□□ 2.57
VSX1-205ENST00000429762 ARID4BQ4LE39 1312 aaPredicted RBP31.09■■■□□ 2.57
VSX1-205ENST00000429762 NBPF1Q3BBV0 1214 aa31.09■■■□□ 2.57
VSX1-205ENST00000429762 ADGRB3O60242 1522 aa31.08■■■□□ 2.57
VSX1-205ENST00000429762 NEURL4Q96JN8 1562 aa31.07■■■□□ 2.56
VSX1-205ENST00000429762 FBXO31Q5XUX0 539 aaPredicted RBP31.06■■■□□ 2.56
VSX1-205ENST00000429762 PIK3C2BO00750 1634 aa31.06■■■□□ 2.56
VSX1-205ENST00000429762 C11orf95C9JLR9 678 aaPredicted RBP31.05■■■□□ 2.56
VSX1-205ENST00000429762 WASHC2AQ641Q2 1341 aa31.04■■■□□ 2.56
VSX1-205ENST00000429762 IFT172Q9UG01 1749 aa31.03■■■□□ 2.56
VSX1-205ENST00000429762 PPP6R1Q9UPN7 881 aa31.01■■■□□ 2.55
VSX1-205ENST00000429762 ERVK-7P63135 1459 aa30.99■■■□□ 2.55
VSX1-205ENST00000429762 IDI1Q13907 227 aa30.97■■■□□ 2.55
VSX1-205ENST00000429762 ADGRF5Q8IZF2 1346 aa30.97■■■□□ 2.55
VSX1-205ENST00000429762 GPRASP1Q5JY77 1395 aa30.95■■■□□ 2.55
VSX1-205ENST00000429762 MYOM2P54296 1465 aa30.95■■■□□ 2.54
VSX1-205ENST00000429762 PPLO60437 1756 aa30.94■■■□□ 2.54
VSX1-205ENST00000429762 CCDC7Q96M83 1385 aa30.94■■■□□ 2.54
VSX1-205ENST00000429762 ESF1Q9H501 851 aaKnown RBP30.94■■■□□ 2.54
VSX1-205ENST00000429762 MYO5BQ9ULV0 1848 aa30.94■■■□□ 2.54
VSX1-205ENST00000429762 LAMC1P11047 1609 aa30.93■■■□□ 2.54
VSX1-205ENST00000429762 ST20-MTHFSA0A0A6YYL1 179 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms