RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 ERBINQ96RT1 1412 aa24.3■■□□□ 1.48
ABCF3-203ENST00000429586 UNC13BO14795 1591 aa24.3■■□□□ 1.48
ABCF3-203ENST00000429586 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
ABCF3-203ENST00000429586 PPRC1Q5VV67 1664 aaKnown RBP24.29■■□□□ 1.48
ABCF3-203ENST00000429586 FAM135AQ9P2D6 1515 aa24.28■■□□□ 1.48
ABCF3-203ENST00000429586 KDM5CP41229 1560 aa24.27■■□□□ 1.48
ABCF3-203ENST00000429586 HECW2Q9P2P5 1572 aa24.24■■□□□ 1.47
ABCF3-203ENST00000429586 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
ABCF3-203ENST00000429586 MIER1Q8N108 512 aa24.23■■□□□ 1.47
ABCF3-203ENST00000429586 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
ABCF3-203ENST00000429586 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
ABCF3-203ENST00000429586 KIF3BO15066 747 aa24.2■■□□□ 1.46
ABCF3-203ENST00000429586 ABCA6Q8N139 1617 aa24.2■■□□□ 1.46
ABCF3-203ENST00000429586 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
ABCF3-203ENST00000429586 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
ABCF3-203ENST00000429586 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
ABCF3-203ENST00000429586 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
ABCF3-203ENST00000429586 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
ABCF3-203ENST00000429586 FRMPD1Q5SYB0 1578 aa24.17■■□□□ 1.46
ABCF3-203ENST00000429586 A2MP01023 1474 aa24.15■■□□□ 1.46
ABCF3-203ENST00000429586 DEPDC5O75140 1603 aa24.15■■□□□ 1.46
ABCF3-203ENST00000429586 TEX14Q8IWB6 1497 aa24.15■■□□□ 1.46
ABCF3-203ENST00000429586 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
ABCF3-203ENST00000429586 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
ABCF3-203ENST00000429586 YEATS2Q9ULM3 1422 aa24.12■■□□□ 1.45
ABCF3-203ENST00000429586 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
ABCF3-203ENST00000429586 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
ABCF3-203ENST00000429586 MROH1Q8NDA8 1641 aa24.1■■□□□ 1.45
ABCF3-203ENST00000429586 SLC24A1O60721 1099 aa24.1■■□□□ 1.45
ABCF3-203ENST00000429586 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
ABCF3-203ENST00000429586 ERICH6Q7L0X2 663 aa24.08■■□□□ 1.44
ABCF3-203ENST00000429586 E9PCH4 1651 aa24.07■■□□□ 1.44
ABCF3-203ENST00000429586 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
ABCF3-203ENST00000429586 PLA2R1Q13018 1463 aa24.05■■□□□ 1.44
ABCF3-203ENST00000429586 COL17A1Q9UMD9 1497 aaPredicted RBP24.05■■□□□ 1.44
ABCF3-203ENST00000429586 KANK1Q14678 1352 aa24.05■■□□□ 1.44
ABCF3-203ENST00000429586 GGT6Q6P531 493 aa24.04■■□□□ 1.44
ABCF3-203ENST00000429586 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
ABCF3-203ENST00000429586 CEP152O94986 1710 aa24.03■■□□□ 1.44
ABCF3-203ENST00000429586 ZMYM4Q5VZL5 1548 aa24.02■■□□□ 1.44
ABCF3-203ENST00000429586 TET3O43151 1660 aa24.02■■□□□ 1.44
ABCF3-203ENST00000429586 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
ABCF3-203ENST00000429586 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
ABCF3-203ENST00000429586 CCDC144AA2RUR9 1427 aa24■■□□□ 1.43
ABCF3-203ENST00000429586 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
ABCF3-203ENST00000429586 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
ABCF3-203ENST00000429586 CFAP65Q6ZU64 1925 aaKnown RBP23.97■■□□□ 1.43
ABCF3-203ENST00000429586 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
ABCF3-203ENST00000429586 ZNF326Q5BKZ1 582 aaKnown RBP23.96■■□□□ 1.43
ABCF3-203ENST00000429586 BCORL1Q5H9F3 1711 aa23.96■■□□□ 1.43
ABCF3-203ENST00000429586 SPHKAPQ2M3C7 1700 aa23.95■■□□□ 1.43
ABCF3-203ENST00000429586 ATP10AO60312 1499 aa23.95■■□□□ 1.42
ABCF3-203ENST00000429586 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
ABCF3-203ENST00000429586 EFCAB6Q5THR3 1501 aa23.92■■□□□ 1.42
ABCF3-203ENST00000429586 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
ABCF3-203ENST00000429586 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
ABCF3-203ENST00000429586 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
ABCF3-203ENST00000429586 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
ABCF3-203ENST00000429586 TRPM2O94759 1503 aa23.88■■□□□ 1.41
ABCF3-203ENST00000429586 ABCC3O15438 1527 aa23.88■■□□□ 1.41
ABCF3-203ENST00000429586 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
ABCF3-203ENST00000429586 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
ABCF3-203ENST00000429586 UGGT1Q9NYU2 1555 aa23.87■■□□□ 1.41
ABCF3-203ENST00000429586 PTPRTO14522 1441 aa23.86■■□□□ 1.41
ABCF3-203ENST00000429586 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
ABCF3-203ENST00000429586 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
ABCF3-203ENST00000429586 NPATQ14207 1427 aa23.83■■□□□ 1.41
ABCF3-203ENST00000429586 MLECQ14165 292 aa23.8■■□□□ 1.4
ABCF3-203ENST00000429586 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
ABCF3-203ENST00000429586 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
ABCF3-203ENST00000429586 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
ABCF3-203ENST00000429586 ZC3H13Q5T200 1668 aaKnown RBP23.77■■□□□ 1.4
ABCF3-203ENST00000429586 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
ABCF3-203ENST00000429586 AGLP35573 1532 aa23.75■■□□□ 1.39
ABCF3-203ENST00000429586 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
ABCF3-203ENST00000429586 KIF1BO60333 1816 aa23.74■■□□□ 1.39
ABCF3-203ENST00000429586 MROH2AA6NES4 1674 aa23.72■■□□□ 1.39
ABCF3-203ENST00000429586 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
ABCF3-203ENST00000429586 CLTCQ00610 1675 aaKnown RBP23.71■■□□□ 1.39
ABCF3-203ENST00000429586 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
ABCF3-203ENST00000429586 CHGAP10645 457 aaKnown RBP23.7■■□□□ 1.38
ABCF3-203ENST00000429586 ARID4BQ4LE39 1312 aaPredicted RBP23.7■■□□□ 1.38
ABCF3-203ENST00000429586 SYNMO15061 1565 aa23.69■■□□□ 1.38
ABCF3-203ENST00000429586 TRPM1Q7Z4N2 1603 aa23.68■■□□□ 1.38
ABCF3-203ENST00000429586 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
ABCF3-203ENST00000429586 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
ABCF3-203ENST00000429586 FBXO31Q5XUX0 539 aaPredicted RBP23.66■■□□□ 1.38
ABCF3-203ENST00000429586 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
ABCF3-203ENST00000429586 NOS1P29475 1434 aa23.66■■□□□ 1.38
ABCF3-203ENST00000429586 PREX1Q8TCU6 1659 aa23.66■■□□□ 1.38
ABCF3-203ENST00000429586 ARHGAP31Q2M1Z3 1444 aa23.65■■□□□ 1.38
ABCF3-203ENST00000429586 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
ABCF3-203ENST00000429586 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
ABCF3-203ENST00000429586 USP47Q96K76 1375 aa23.65■■□□□ 1.38
ABCF3-203ENST00000429586 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
ABCF3-203ENST00000429586 ADGRB3O60242 1522 aa23.61■■□□□ 1.37
ABCF3-203ENST00000429586 PIK3C2BO00750 1634 aa23.61■■□□□ 1.37
ABCF3-203ENST00000429586 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
ABCF3-203ENST00000429586 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
ABCF3-203ENST00000429586 WASHC2AQ641Q2 1341 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms