RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
TIMM9P3-201ENST00000428659 OSBPP22059 807 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 NBR1Q14596 966 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 PROX2Q3B8N5 592 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 C6orf132Q5T0Z8 1188 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
TIMM9P3-201ENST00000428659 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
TIMM9P3-201ENST00000428659 PTPREP23469 700 aa9.29□□□□□ -0.92
TIMM9P3-201ENST00000428659 SEMA3EO15041 775 aa9.28□□□□□ -0.92
TIMM9P3-201ENST00000428659 EPAS1Q99814 870 aa9.28□□□□□ -0.92
TIMM9P3-201ENST00000428659 EN1Q05925 392 aaPredicted RBP9.27□□□□□ -0.93
TIMM9P3-201ENST00000428659 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
TIMM9P3-201ENST00000428659 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
TIMM9P3-201ENST00000428659 BHMG1C9JSJ3 638 aaPredicted RBP9.26□□□□□ -0.93
TIMM9P3-201ENST00000428659 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
TIMM9P3-201ENST00000428659 TK2O00142 265 aa9.26□□□□□ -0.93
TIMM9P3-201ENST00000428659 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
TIMM9P3-201ENST00000428659 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
TIMM9P3-201ENST00000428659 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
TIMM9P3-201ENST00000428659 MAP3K7O43318 606 aa9.23□□□□□ -0.93
TIMM9P3-201ENST00000428659 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
TIMM9P3-201ENST00000428659 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
TIMM9P3-201ENST00000428659 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
TIMM9P3-201ENST00000428659 NPDC1Q9NQX5 325 aaPredicted RBP9.23□□□□□ -0.93
TIMM9P3-201ENST00000428659 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
TIMM9P3-201ENST00000428659 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
TIMM9P3-201ENST00000428659 TESPA1A2RU30 521 aaPredicted RBP9.17□□□□□ -0.94
TIMM9P3-201ENST00000428659 P3H3Q8IVL6 736 aa9.17□□□□□ -0.94
TIMM9P3-201ENST00000428659 KCNH8Q96L42 1107 aa9.17□□□□□ -0.94
TIMM9P3-201ENST00000428659 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
TIMM9P3-201ENST00000428659 KCTD12Q96CX2 325 aaKnown RBP9.16□□□□□ -0.94
TIMM9P3-201ENST00000428659 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
TIMM9P3-201ENST00000428659 SMAPO00193 183 aa9.15□□□□□ -0.94
TIMM9P3-201ENST00000428659 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
TIMM9P3-201ENST00000428659 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
TIMM9P3-201ENST00000428659 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
TIMM9P3-201ENST00000428659 PRSS12P56730 875 aa9.13□□□□□ -0.95
TIMM9P3-201ENST00000428659 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
TIMM9P3-201ENST00000428659 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
TIMM9P3-201ENST00000428659 ONECUT3O60422 494 aaPredicted RBP9.09□□□□□ -0.95
TIMM9P3-201ENST00000428659 PTGDRQ13258 359 aa9.09□□□□□ -0.95
TIMM9P3-201ENST00000428659 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
TIMM9P3-201ENST00000428659 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
TIMM9P3-201ENST00000428659 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
TIMM9P3-201ENST00000428659 FECHP22830 423 aa9.08□□□□□ -0.96
TIMM9P3-201ENST00000428659 PTPN5P54829 565 aa9.08□□□□□ -0.96
TIMM9P3-201ENST00000428659 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
TIMM9P3-201ENST00000428659 GPR37O15354 613 aa9.07□□□□□ -0.96
TIMM9P3-201ENST00000428659 BCAMP50895 628 aa9.07□□□□□ -0.96
TIMM9P3-201ENST00000428659 THSD4Q6ZMP0 1018 aa9.07□□□□□ -0.96
TIMM9P3-201ENST00000428659 WNT2BQ93097 391 aa9.07□□□□□ -0.96
TIMM9P3-201ENST00000428659 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
TIMM9P3-201ENST00000428659 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
TIMM9P3-201ENST00000428659 TATDN2Q93075 761 aa9.06□□□□□ -0.96
TIMM9P3-201ENST00000428659 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
TIMM9P3-201ENST00000428659 PNMA3Q9UL41 463 aa9.05□□□□□ -0.96
TIMM9P3-201ENST00000428659 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
TIMM9P3-201ENST00000428659 CERKQ8TCT0 537 aa9.04□□□□□ -0.96
TIMM9P3-201ENST00000428659 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
TIMM9P3-201ENST00000428659 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
TIMM9P3-201ENST00000428659 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
TIMM9P3-201ENST00000428659 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
TIMM9P3-201ENST00000428659 EYA1Q99502 592 aa9.01□□□□□ -0.97
TIMM9P3-201ENST00000428659 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
TIMM9P3-201ENST00000428659 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
TIMM9P3-201ENST00000428659 WBP1LQ9NX94 342 aa8.99□□□□□ -0.97
TIMM9P3-201ENST00000428659 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
TIMM9P3-201ENST00000428659 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
TIMM9P3-201ENST00000428659 ADGRG1Q9Y653 693 aa8.98□□□□□ -0.97
TIMM9P3-201ENST00000428659 FCHSD2O94868 740 aa8.97□□□□□ -0.97
TIMM9P3-201ENST00000428659 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
TIMM9P3-201ENST00000428659 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
TIMM9P3-201ENST00000428659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
TIMM9P3-201ENST00000428659 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
TIMM9P3-201ENST00000428659 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
TIMM9P3-201ENST00000428659 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
TIMM9P3-201ENST00000428659 HPS5Q9UPZ3 1129 aa8.94□□□□□ -0.98
TIMM9P3-201ENST00000428659 HIC1Q14526 733 aa8.93□□□□□ -0.98
TIMM9P3-201ENST00000428659 PHOX2BQ99453 314 aa8.93□□□□□ -0.98
TIMM9P3-201ENST00000428659 GNPATO15228 680 aa8.92□□□□□ -0.98
TIMM9P3-201ENST00000428659 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
TIMM9P3-201ENST00000428659 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
TIMM9P3-201ENST00000428659 PLA2G2EQ9NZK7 142 aa8.91□□□□□ -0.98
TIMM9P3-201ENST00000428659 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
TIMM9P3-201ENST00000428659 PXYLP1Q8TE99 480 aa8.9□□□□□ -0.98
TIMM9P3-201ENST00000428659 TSR3Q9UJK0 312 aaKnown RBP8.89□□□□□ -0.99
TIMM9P3-201ENST00000428659 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
TIMM9P3-201ENST00000428659 APLP1P51693 650 aa8.87□□□□□ -0.99
TIMM9P3-201ENST00000428659 LMOD2Q6P5Q4 547 aa8.87□□□□□ -0.99
TIMM9P3-201ENST00000428659 TMEM134Q9H6X4 195 aa8.87□□□□□ -0.99
TIMM9P3-201ENST00000428659 RNF40O75150 1001 aa8.86□□□□□ -0.99
TIMM9P3-201ENST00000428659 PPP4CP60510 307 aa8.86□□□□□ -0.99
TIMM9P3-201ENST00000428659 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
TIMM9P3-201ENST00000428659 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
TIMM9P3-201ENST00000428659 SLC10A3P09131 477 aa8.85□□□□□ -0.99
TIMM9P3-201ENST00000428659 DNAJB2P25686 324 aa8.84□□□□□ -0.99
TIMM9P3-201ENST00000428659 TJAP1Q5JTD0 557 aa8.82□□□□□ -1
TIMM9P3-201ENST00000428659 ZNF516Q92618 1163 aa8.82□□□□□ -1
TIMM9P3-201ENST00000428659 IRF6O14896 467 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms