RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ANKRD30AQ9BXX3 1397 aa26.39■■□□□ 1.82
AC055811.2-201ENST00000427497 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
AC055811.2-201ENST00000427497 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
AC055811.2-201ENST00000427497 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
AC055811.2-201ENST00000427497 PLXNC1O60486 1568 aa26.36■■□□□ 1.81
AC055811.2-201ENST00000427497 HSPA2P54652 639 aa26.36■■□□□ 1.81
AC055811.2-201ENST00000427497 C3P01024 1663 aa26.36■■□□□ 1.81
AC055811.2-201ENST00000427497 TSPY4P0CV99 314 aa26.35■■□□□ 1.81
AC055811.2-201ENST00000427497 TSPY10P0CW01 314 aa26.35■■□□□ 1.81
AC055811.2-201ENST00000427497 ESF1Q9H501 851 aaKnown RBP26.34■■□□□ 1.81
AC055811.2-201ENST00000427497 A2MP01023 1474 aa26.34■■□□□ 1.81
AC055811.2-201ENST00000427497 SETD1BQ9UPS6 1966 aaKnown RBP26.33■■□□□ 1.81
AC055811.2-201ENST00000427497 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
AC055811.2-201ENST00000427497 RTEL1-TNFRSF6BF6WH68 1400 aa26.3■■□□□ 1.8
AC055811.2-201ENST00000427497 ILDR1Q86SU0 546 aaPredicted RBP26.29■■□□□ 1.8
AC055811.2-201ENST00000427497 MROH2AA6NES4 1674 aa26.27■■□□□ 1.8
AC055811.2-201ENST00000427497 ANKRD50Q9ULJ7 1429 aa26.26■■□□□ 1.79
AC055811.2-201ENST00000427497 UHRF1BP1Q6BDS2 1440 aa26.25■■□□□ 1.79
AC055811.2-201ENST00000427497 KIF15Q9NS87 1388 aa26.24■■□□□ 1.79
AC055811.2-201ENST00000427497 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
AC055811.2-201ENST00000427497 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
AC055811.2-201ENST00000427497 ZMYM3Q14202 1370 aa26.19■■□□□ 1.78
AC055811.2-201ENST00000427497 DHX29Q7Z478 1369 aaKnown RBP26.19■■□□□ 1.78
AC055811.2-201ENST00000427497 GGT6Q6P531 493 aa26.19■■□□□ 1.78
AC055811.2-201ENST00000427497 MPHOSPH9Q99550 1183 aa26.16■■□□□ 1.78
AC055811.2-201ENST00000427497 NPATQ14207 1427 aa26.16■■□□□ 1.78
AC055811.2-201ENST00000427497 PZPP20742 1482 aa26.15■■□□□ 1.78
AC055811.2-201ENST00000427497 PPP6R1Q9UPN7 881 aa26.15■■□□□ 1.78
AC055811.2-201ENST00000427497 STRCQ7RTU9 1775 aa26.15■■□□□ 1.78
AC055811.2-201ENST00000427497 KDM5DQ9BY66 1539 aa26.13■■□□□ 1.77
AC055811.2-201ENST00000427497 DUOX2Q9NRD8 1548 aa26.13■■□□□ 1.77
AC055811.2-201ENST00000427497 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
AC055811.2-201ENST00000427497 KIF3BO15066 747 aa26.09■■□□□ 1.77
AC055811.2-201ENST00000427497 TIMELESSQ9UNS1 1208 aa26.09■■□□□ 1.77
AC055811.2-201ENST00000427497 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
AC055811.2-201ENST00000427497 UNC13BO14795 1591 aa26.06■■□□□ 1.76
AC055811.2-201ENST00000427497 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
AC055811.2-201ENST00000427497 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
AC055811.2-201ENST00000427497 FBXO41Q8TF61 875 aa26.04■■□□□ 1.76
AC055811.2-201ENST00000427497 MYO3AQ8NEV4 1616 aa26.04■■□□□ 1.76
AC055811.2-201ENST00000427497 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
AC055811.2-201ENST00000427497 NEUROD1Q13562 356 aa26.03■■□□□ 1.76
AC055811.2-201ENST00000427497 NUP155O75694 1391 aa26.02■■□□□ 1.76
AC055811.2-201ENST00000427497 ZNF142P52746 1687 aaPredicted RBP26.02■■□□□ 1.76
AC055811.2-201ENST00000427497 ANKRD30BQ9BXX2 1392 aa26.02■■□□□ 1.76
AC055811.2-201ENST00000427497 CAMSAP1Q5T5Y3 1602 aa25.99■■□□□ 1.75
AC055811.2-201ENST00000427497 RNF17Q9BXT8 1623 aaKnown RBP25.98■■□□□ 1.75
AC055811.2-201ENST00000427497 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
AC055811.2-201ENST00000427497 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
AC055811.2-201ENST00000427497 WASHC2CQ9Y4E1 1318 aa25.97■■□□□ 1.75
AC055811.2-201ENST00000427497 PTPRTO14522 1441 aa25.97■■□□□ 1.75
AC055811.2-201ENST00000427497 FOXD1Q16676 465 aa25.96■■□□□ 1.75
AC055811.2-201ENST00000427497 IQGAP3Q86VI3 1631 aa25.95■■□□□ 1.74
AC055811.2-201ENST00000427497 CERKQ8TCT0 537 aa25.93■■□□□ 1.74
AC055811.2-201ENST00000427497 PKD2Q13563 968 aa25.93■■□□□ 1.74
AC055811.2-201ENST00000427497 TONSLQ96HA7 1378 aa25.92■■□□□ 1.74
AC055811.2-201ENST00000427497 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
AC055811.2-201ENST00000427497 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
AC055811.2-201ENST00000427497 DEPDC5O75140 1603 aa25.91■■□□□ 1.74
AC055811.2-201ENST00000427497 ZC3H13Q5T200 1668 aaKnown RBP25.91■■□□□ 1.74
AC055811.2-201ENST00000427497 A2ML1A8K2U0 1454 aa25.9■■□□□ 1.74
AC055811.2-201ENST00000427497 PLA2R1Q13018 1463 aa25.9■■□□□ 1.74
AC055811.2-201ENST00000427497 MROH1Q8NDA8 1641 aa25.89■■□□□ 1.74
AC055811.2-201ENST00000427497 TNRQ92752 1358 aa25.89■■□□□ 1.74
AC055811.2-201ENST00000427497 ABCC3O15438 1527 aa25.89■■□□□ 1.73
AC055811.2-201ENST00000427497 PPP1R15AO75807 674 aaPredicted RBP25.87■■□□□ 1.73
AC055811.2-201ENST00000427497 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
AC055811.2-201ENST00000427497 ZNF316A6NFI3 1004 aaPredicted RBP25.83■■□□□ 1.73
AC055811.2-201ENST00000427497 CEP152O94986 1710 aa25.83■■□□□ 1.73
AC055811.2-201ENST00000427497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.82■■□□□ 1.724e-8■□□□□ 8.4
AC055811.2-201ENST00000427497 VWDEQ8N2E2 1590 aa25.81■■□□□ 1.72
AC055811.2-201ENST00000427497 PRDM15P57071 1507 aaPredicted RBP25.8■■□□□ 1.72
AC055811.2-201ENST00000427497 LTBP4Q8N2S1 1624 aa25.8■■□□□ 1.72
AC055811.2-201ENST00000427497 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
AC055811.2-201ENST00000427497 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
AC055811.2-201ENST00000427497 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.71
AC055811.2-201ENST00000427497 POLR1AO95602 1720 aaPredicted RBP25.76■■□□□ 1.71
AC055811.2-201ENST00000427497 ERVK-7P63135 1459 aa25.75■■□□□ 1.71
AC055811.2-201ENST00000427497 UGGT1Q9NYU2 1555 aa25.74■■□□□ 1.71
AC055811.2-201ENST00000427497 TET3O43151 1660 aa25.74■■□□□ 1.71
AC055811.2-201ENST00000427497 L3MBTL2Q969R5 705 aa25.73■■□□□ 1.71
AC055811.2-201ENST00000427497 E9PCH4 1651 aa25.71■■□□□ 1.71
AC055811.2-201ENST00000427497 KANK1Q14678 1352 aa25.71■■□□□ 1.71
AC055811.2-201ENST00000427497 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
AC055811.2-201ENST00000427497 THEMISQ8N1K5 641 aaPredicted RBP25.71■■□□□ 1.71
AC055811.2-201ENST00000427497 ARHGAP31Q2M1Z3 1444 aa25.7■■□□□ 1.7
AC055811.2-201ENST00000427497 ZNF335Q9H4Z2 1342 aaPredicted RBP25.69■■□□□ 1.7
AC055811.2-201ENST00000427497 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
AC055811.2-201ENST00000427497 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
AC055811.2-201ENST00000427497 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
AC055811.2-201ENST00000427497 CCDC144AA2RUR9 1427 aa25.64■■□□□ 1.7
AC055811.2-201ENST00000427497 UBR1Q8IWV7 1749 aa25.63■■□□□ 1.69
AC055811.2-201ENST00000427497 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
AC055811.2-201ENST00000427497 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
AC055811.2-201ENST00000427497 MED14O60244 1454 aa25.61■■□□□ 1.69
AC055811.2-201ENST00000427497 TRPM2O94759 1503 aa25.6■■□□□ 1.69
AC055811.2-201ENST00000427497 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
AC055811.2-201ENST00000427497 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
AC055811.2-201ENST00000427497 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
AC055811.2-201ENST00000427497 PIK3C2BO00750 1634 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms