RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 EPAS1Q99814 870 aa15.18■□□□□ 0.02
HFM1-202ENST00000427444 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
HFM1-202ENST00000427444 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
HFM1-202ENST00000427444 PDIA6Q15084 440 aa15.15■□□□□ 0.02
HFM1-202ENST00000427444 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
HFM1-202ENST00000427444 PROX2Q3B8N5 592 aa15.14■□□□□ 0.01
HFM1-202ENST00000427444 TSHZ2Q9NRE2 1034 aa15.14■□□□□ 0.01
HFM1-202ENST00000427444 C6orf132Q5T0Z8 1188 aa15.13■□□□□ 0.01
HFM1-202ENST00000427444 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
HFM1-202ENST00000427444 GOLGA8CPA6NN73 597 aa15.12■□□□□ 0.01
HFM1-202ENST00000427444 SPDYE16A6NNV3 312 aaPredicted RBP15.12■□□□□ 0.01
HFM1-202ENST00000427444 NBR1Q14596 966 aa15.11■□□□□ 0.01
HFM1-202ENST00000427444 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
HFM1-202ENST00000427444 PTPN5P54829 565 aa15.08■□□□□ 0
HFM1-202ENST00000427444 ARIH1Q9Y4X5 557 aaPredicted RBP15.06■□□□□ 0
HFM1-202ENST00000427444 GRXCR2A6NFK2 248 aa15.05■□□□□ -0
HFM1-202ENST00000427444 MAP3K7O43318 606 aa15.05■□□□□ -0
HFM1-202ENST00000427444 WNT2BQ93097 391 aa15.05■□□□□ -0
HFM1-202ENST00000427444 RABGEF1Q9UJ41 708 aa15.05■□□□□ -0
HFM1-202ENST00000427444 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
HFM1-202ENST00000427444 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
HFM1-202ENST00000427444 PLA2G2EQ9NZK7 142 aa15.03■□□□□ -0
HFM1-202ENST00000427444 KIAA1468Q9P260 1216 aa15.03■□□□□ -0
HFM1-202ENST00000427444 THSD4Q6ZMP0 1018 aa15.01□□□□□ -0.01
HFM1-202ENST00000427444 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
HFM1-202ENST00000427444 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
HFM1-202ENST00000427444 SEPT9Q9UHD8 586 aaPredicted RBP14.96□□□□□ -0.01
HFM1-202ENST00000427444 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
HFM1-202ENST00000427444 ANKK1Q8NFD2 765 aa14.94□□□□□ -0.02
HFM1-202ENST00000427444 OSBPP22059 807 aa14.91□□□□□ -0.02
HFM1-202ENST00000427444 LAPTM4BQ86VI4 370 aa14.91□□□□□ -0.02
HFM1-202ENST00000427444 KCNV2Q8TDN2 545 aa14.9□□□□□ -0.02
HFM1-202ENST00000427444 BCAMP50895 628 aa14.89□□□□□ -0.03
HFM1-202ENST00000427444 ZFRQ96KR1 1074 aaKnown RBP14.89□□□□□ -0.03
HFM1-202ENST00000427444 TSKSQ9UJT2 592 aa14.89□□□□□ -0.03
HFM1-202ENST00000427444 PACS2Q86VP3 889 aa14.88□□□□□ -0.03
HFM1-202ENST00000427444 ARHGEF1Q92888 912 aaKnown RBP14.87□□□□□ -0.03
HFM1-202ENST00000427444 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
HFM1-202ENST00000427444 CDHR5Q9HBB8 845 aa14.87□□□□□ -0.03
HFM1-202ENST00000427444 PRSS12P56730 875 aa14.85□□□□□ -0.03
HFM1-202ENST00000427444 FAM98CQ17RN3 349 aaKnown RBP14.85□□□□□ -0.03
HFM1-202ENST00000427444 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
HFM1-202ENST00000427444 SOWAHBA6NEL2 793 aa14.83□□□□□ -0.04
HFM1-202ENST00000427444 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
HFM1-202ENST00000427444 SMAPO00193 183 aa14.81□□□□□ -0.04
HFM1-202ENST00000427444 MLLT3P42568 568 aaPredicted RBP14.81□□□□□ -0.04
HFM1-202ENST00000427444 FAM198AQ9UFP1 575 aa14.81□□□□□ -0.04
HFM1-202ENST00000427444 LRCH3Q96II8 777 aa14.77□□□□□ -0.05
HFM1-202ENST00000427444 WBP1LQ9NX94 342 aa14.77□□□□□ -0.05
HFM1-202ENST00000427444 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.77□□□□□ -0.05
HFM1-202ENST00000427444 C3orf80F5H4A9 247 aa14.76□□□□□ -0.05
HFM1-202ENST00000427444 PNMA3Q9UL41 463 aa14.76□□□□□ -0.05
HFM1-202ENST00000427444 TATDN2Q93075 761 aa14.75□□□□□ -0.05
HFM1-202ENST00000427444 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
HFM1-202ENST00000427444 HPS5Q9UPZ3 1129 aa14.74□□□□□ -0.05
HFM1-202ENST00000427444 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
HFM1-202ENST00000427444 NPDC1Q9NQX5 325 aaPredicted RBP14.72□□□□□ -0.05
HFM1-202ENST00000427444 NUDT18Q6ZVK8 323 aa14.71□□□□□ -0.05
HFM1-202ENST00000427444 TSR3Q9UJK0 312 aaKnown RBP14.71□□□□□ -0.05
HFM1-202ENST00000427444 PADI6Q6TGC4 694 aa14.7□□□□□ -0.06
HFM1-202ENST00000427444 SAMD7Q7Z3H4 446 aa14.7□□□□□ -0.06
HFM1-202ENST00000427444 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
HFM1-202ENST00000427444 RBM27Q9P2N5 1060 aaKnown RBP14.69□□□□□ -0.06
HFM1-202ENST00000427444 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
HFM1-202ENST00000427444 SEMA3EO15041 775 aa14.66□□□□□ -0.06
HFM1-202ENST00000427444 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
HFM1-202ENST00000427444 PPP4CP60510 307 aa14.65□□□□□ -0.06
HFM1-202ENST00000427444 TTC13Q8NBP0 860 aa14.64□□□□□ -0.07
HFM1-202ENST00000427444 NUTM2FA1L443 756 aa14.62□□□□□ -0.07
HFM1-202ENST00000427444 RNF40O75150 1001 aa14.62□□□□□ -0.07
HFM1-202ENST00000427444 ITGBL1O95965 494 aaPredicted RBP14.61□□□□□ -0.07
HFM1-202ENST00000427444 A0A0G2JS52 829 aa14.6□□□□□ -0.07
HFM1-202ENST00000427444 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
HFM1-202ENST00000427444 PTGDRQ13258 359 aa14.59□□□□□ -0.07
HFM1-202ENST00000427444 KCNC4Q03721 635 aa14.56□□□□□ -0.08
HFM1-202ENST00000427444 SWT1Q5T5J6 900 aaKnown RBP14.55□□□□□ -0.08
HFM1-202ENST00000427444 EYA1Q99502 592 aa14.53□□□□□ -0.08
HFM1-202ENST00000427444 KDM2AQ9Y2K7 1162 aa14.51□□□□□ -0.09
HFM1-202ENST00000427444 TESPA1A2RU30 521 aaPredicted RBP14.49□□□□□ -0.09
HFM1-202ENST00000427444 FCHSD2O94868 740 aa14.49□□□□□ -0.09
HFM1-202ENST00000427444 FAM161AQ3B820 660 aa14.49□□□□□ -0.09
HFM1-202ENST00000427444 RBM26Q5T8P6 1007 aaKnown RBP14.48□□□□□ -0.09
HFM1-202ENST00000427444 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
HFM1-202ENST00000427444 ADGRG1Q9Y653 693 aa14.47□□□□□ -0.09
HFM1-202ENST00000427444 RGS20O76081 388 aa14.46□□□□□ -0.09
HFM1-202ENST00000427444 APLP1P51693 650 aa14.46□□□□□ -0.09
HFM1-202ENST00000427444 RBM46Q8TBY0 533 aaKnown RBP14.46□□□□□ -0.09
HFM1-202ENST00000427444 TJAP1Q5JTD0 557 aa14.45□□□□□ -0.1
HFM1-202ENST00000427444 SMYD5Q6GMV2 418 aa14.45□□□□□ -0.1
HFM1-202ENST00000427444 SLC4A3P48751 1232 aa14.44□□□□□ -0.1
HFM1-202ENST00000427444 MTRQ99707 1265 aa14.44□□□□□ -0.1
HFM1-202ENST00000427444 DNAJB2P25686 324 aa14.42□□□□□ -0.1
HFM1-202ENST00000427444 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
HFM1-202ENST00000427444 IL21Q9HBE4 155 aa14.41□□□□□ -0.1
HFM1-202ENST00000427444 RCCD1A6NED2 376 aa14.39□□□□□ -0.11
HFM1-202ENST00000427444 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
HFM1-202ENST00000427444 HIC1Q14526 733 aa14.37□□□□□ -0.11
HFM1-202ENST00000427444 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
HFM1-202ENST00000427444 COPS2P61201 443 aa14.36□□□□□ -0.11
HFM1-202ENST00000427444 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms