RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 TXLNBQ8N3L3 684 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 FAM193AP78312 1265 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 SLC4A1APQ9BWU0 796 aaKnown RBP3.16□□□□□ -1.9
NEB-209ENST00000427231 CHRM1P11229 460 aaPredicted RBP3.16□□□□□ -1.9
NEB-209ENST00000427231 NPHP1O15259 732 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 KNSTRNQ9Y448 316 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 TPM3P06753 285 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 KIF16BQ96L93 1317 aa3.15□□□□□ -1.9
NEB-209ENST00000427231 CHAF1AQ13111 956 aaPredicted RBP3.15□□□□□ -1.9
NEB-209ENST00000427231 ERICH4A6NGS2 130 aa3.15□□□□□ -1.9
NEB-209ENST00000427231 FOXD4L1Q9NU39 408 aa3.15□□□□□ -1.9
NEB-209ENST00000427231 SIN3AQ96ST3 1273 aa3.15□□□□□ -1.9
NEB-209ENST00000427231 VGFO15240 615 aaPredicted RBP3.15□□□□□ -1.9
NEB-209ENST00000427231 PODNQ7Z5L7 613 aa3.15□□□□□ -1.91
NEB-209ENST00000427231 PMFBP1Q8TBY8 1022 aa3.15□□□□□ -1.91
NEB-209ENST00000427231 EPB41L2O43491 1005 aaKnown RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 SLKQ9H2G2 1235 aaPredicted RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 GTPBP4Q9BZE4 634 aaKnown RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 WDR43Q15061 677 aaKnown RBP eCLIP3.15□□□□□ -1.91
NEB-209ENST00000427231 SAMD1Q6SPF0 538 aaPredicted RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 CCDC7Q96M83 1385 aa3.15□□□□□ -1.91
NEB-209ENST00000427231 NFKBIBQ15653 356 aa3.15□□□□□ -1.91
NEB-209ENST00000427231 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 ZRSR1Q15695 479 aaKnown RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 FAM43BQ6ZT52 329 aaPredicted RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 GTF2E1P29083 439 aaPredicted RBP3.15□□□□□ -1.91
NEB-209ENST00000427231 CHGAP10645 457 aaKnown RBP3.14□□□□□ -1.91
NEB-209ENST00000427231 CWC22Q9HCG8 908 aaKnown RBP3.14□□□□□ -1.91
NEB-209ENST00000427231 TMF1P82094 1093 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 GPS2Q13227 327 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 BANK1Q8NDB2 785 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 MTUS2Q5JR59 1369 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 LOC102724159A0A0B4J2E5 919 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 GTF2A1P52655 376 aaPredicted RBP3.14□□□□□ -1.91
NEB-209ENST00000427231 PWP2Q15269 919 aaKnown RBP3.14□□□□□ -1.91
NEB-209ENST00000427231 TONSLQ96HA7 1378 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 LETM1O95202 739 aaPredicted RBP3.14□□□□□ -1.91
NEB-209ENST00000427231 TOMM22Q9NS69 142 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 HSP90AB4PQ58FF6 505 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 ZNF592Q92610 1267 aa3.14□□□□□ -1.91
NEB-209ENST00000427231 PPP4R3BQ5MIZ7 849 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 DRC7Q8IY82 874 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 KIAA1211Q6ZU35 1233 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 KIF7Q2M1P5 1343 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 TMX1Q9H3N1 280 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 PDCL3Q9H2J4 239 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 ZBTB22O15209 634 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 FOXD4L5Q5VV16 416 aaPredicted RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 TAF3Q5VWG9 929 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 FOXD4L4Q8WXT5 416 aaPredicted RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 PDCL2Q8N4E4 241 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 CAGE1Q8TC20 777 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 GBP4Q96PP9 640 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 PLCD4Q9BRC7 762 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 POLR3GO15318 223 aaPredicted RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 DDX11L8A8MPP1 907 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 TPM4P67936 248 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 CLGNO14967 610 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 FMNL3Q8IVF7 1028 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 U2SURPO15042 1029 aaKnown RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 RBM26Q5T8P6 1007 aaKnown RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 CCP110O43303 1012 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 FAM177BA6PVY3 158 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 KIF27Q86VH2 1401 aa3.13□□□□□ -1.91
NEB-209ENST00000427231 FRAT2O75474 233 aaPredicted RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 SOS1Q07889 1333 aaPredicted RBP3.13□□□□□ -1.91
NEB-209ENST00000427231 HMMRO75330 724 aa3.12□□□□□ -1.91
NEB-209ENST00000427231 FBXO3Q9UK99 471 aa3.12□□□□□ -1.91
NEB-209ENST00000427231 ZNF692Q9BU19 519 aaPredicted RBP3.12□□□□□ -1.91
NEB-209ENST00000427231 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.12□□□□□ -1.91
NEB-209ENST00000427231 ZNF777Q9ULD5 760 aaPredicted RBP3.12□□□□□ -1.91
NEB-209ENST00000427231 HMGN5P82970 282 aaKnown RBP3.12□□□□□ -1.91
NEB-209ENST00000427231 SLC52A1Q9NWF4 448 aa3.12□□□□□ -1.91
NEB-209ENST00000427231 MAPK8IP3Q9UPT6 1336 aa3.12□□□□□ -1.91
NEB-209ENST00000427231 SH3BGRP55822 239 aaPredicted RBP3.12□□□□□ -1.91
NEB-209ENST00000427231 NLRP13Q86W25 1043 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 CENPJQ9HC77 1338 aaPredicted RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 HSP90AB3PQ58FF7 597 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 TTLL5Q6EMB2 1281 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 ROCK1Q13464 1354 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 EFCAB2Q5VUJ9 269 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 GPATCH3Q96I76 525 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 DNAJC2Q99543 621 aaKnown RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 CCNB3Q8WWL7 1395 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.11□□□□□ -1.91
NEB-209ENST00000427231 CPLX2Q6PUV4 134 aaKnown RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 IQSEC3Q9UPP2 1182 aaPredicted RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 GOLIM4O00461 696 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 MPHOSPH10O00566 681 aaKnown RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 PYM1Q9BRP8 204 aaKnown RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 HIP1O00291 1037 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 WRNQ14191 1432 aaPredicted RBP eCLIP3.11□□□□□ -1.91
NEB-209ENST00000427231 EP400NLQ6ZTU2 488 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 PDE4AP27815 886 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 RWDD1Q9H446 243 aaPredicted RBP3.11□□□□□ -1.91
NEB-209ENST00000427231 INSRP06213 1382 aa3.11□□□□□ -1.91
NEB-209ENST00000427231 HOOK1Q9UJC3 728 aaKnown RBP3.1□□□□□ -1.91
NEB-209ENST00000427231 CREBRFQ8IUR6 639 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 CFDP1Q9UEE9 299 aaPredicted RBP3.1□□□□□ -1.91
NEB-209ENST00000427231 EIF3AQ14152 1382 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms