RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
LINC00472-203ENST00000426635 TRAK2O60296 914 aa21.81■■□□□ 1.08
LINC00472-203ENST00000426635 KIAA1211Q6ZU35 1233 aa21.8■■□□□ 1.08
LINC00472-203ENST00000426635 KDM5CP41229 1560 aa21.79■■□□□ 1.08
LINC00472-203ENST00000426635 CARD11Q9BXL7 1154 aa21.78■■□□□ 1.08
LINC00472-203ENST00000426635 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
LINC00472-203ENST00000426635 ST20-MTHFSA0A0A6YYL1 179 aa21.77■■□□□ 1.08
LINC00472-203ENST00000426635 TBC1D2Q9BYX2 928 aa21.77■■□□□ 1.08
LINC00472-203ENST00000426635 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
LINC00472-203ENST00000426635 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
LINC00472-203ENST00000426635 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
LINC00472-203ENST00000426635 IGHDP01880 384 aa21.73■■□□□ 1.07
LINC00472-203ENST00000426635 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
LINC00472-203ENST00000426635 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
LINC00472-203ENST00000426635 UGGT2Q9NYU1 1516 aa21.73■■□□□ 1.07
LINC00472-203ENST00000426635 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
LINC00472-203ENST00000426635 FGD1P98174 961 aa21.72■■□□□ 1.07
LINC00472-203ENST00000426635 PARD3Q8TEW0 1356 aa21.71■■□□□ 1.07
LINC00472-203ENST00000426635 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.06
LINC00472-203ENST00000426635 DUSP27Q5VZP5 1158 aa21.7■■□□□ 1.06
LINC00472-203ENST00000426635 UPF2Q9HAU5 1272 aaKnown RBP21.69■■□□□ 1.06
LINC00472-203ENST00000426635 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
LINC00472-203ENST00000426635 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
LINC00472-203ENST00000426635 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
LINC00472-203ENST00000426635 ARID3AQ99856 593 aa21.69■■□□□ 1.06
LINC00472-203ENST00000426635 FAM13BQ9NYF5 915 aa21.69■■□□□ 1.06
LINC00472-203ENST00000426635 NLRP1Q9C000 1473 aa21.68■■□□□ 1.06
LINC00472-203ENST00000426635 KIF14Q15058 1648 aa21.67■■□□□ 1.06
LINC00472-203ENST00000426635 ZMYM4Q5VZL5 1548 aa21.66■■□□□ 1.06
LINC00472-203ENST00000426635 RIPK4P57078 832 aa21.66■■□□□ 1.06
LINC00472-203ENST00000426635 KDM2AQ9Y2K7 1162 aa21.66■■□□□ 1.06
LINC00472-203ENST00000426635 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
LINC00472-203ENST00000426635 TBC1D32Q96NH3 1257 aa21.64■■□□□ 1.06
LINC00472-203ENST00000426635 ADAMTS8Q9UP79 889 aa21.64■■□□□ 1.06
LINC00472-203ENST00000426635 CHMP5Q9NZZ3 219 aa21.64■■□□□ 1.05
LINC00472-203ENST00000426635 GAS2L3Q86XJ1 694 aa21.63■■□□□ 1.05
LINC00472-203ENST00000426635 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
LINC00472-203ENST00000426635 GRIN2BQ13224 1484 aa21.62■■□□□ 1.05
LINC00472-203ENST00000426635 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
LINC00472-203ENST00000426635 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
LINC00472-203ENST00000426635 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
LINC00472-203ENST00000426635 BCAR3O75815 825 aa21.61■■□□□ 1.05
LINC00472-203ENST00000426635 GOLGA2Q08379 1002 aa21.6■■□□□ 1.05
LINC00472-203ENST00000426635 ZHX1Q9UKY1 873 aaPredicted RBP21.6■■□□□ 1.05
LINC00472-203ENST00000426635 E9PCH4 1651 aa21.6■■□□□ 1.05
LINC00472-203ENST00000426635 PER1O15534 1290 aaPredicted RBP21.59■■□□□ 1.05
LINC00472-203ENST00000426635 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
LINC00472-203ENST00000426635 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
LINC00472-203ENST00000426635 OFD1O75665 1012 aa21.58■■□□□ 1.05
LINC00472-203ENST00000426635 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.05
LINC00472-203ENST00000426635 DDX11L8A8MPP1 907 aa21.58■■□□□ 1.04
LINC00472-203ENST00000426635 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
LINC00472-203ENST00000426635 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
LINC00472-203ENST00000426635 R3HCC1Q9Y3T6 440 aaKnown RBP21.57■■□□□ 1.04
LINC00472-203ENST00000426635 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
LINC00472-203ENST00000426635 PKD2Q13563 968 aa21.56■■□□□ 1.04
LINC00472-203ENST00000426635 ZSCAN30Q86W11 494 aa21.55■■□□□ 1.04
LINC00472-203ENST00000426635 MAP7D2Q96T17 732 aa21.55■■□□□ 1.04
LINC00472-203ENST00000426635 MSNP26038 577 aaKnown RBP21.54■■□□□ 1.04
LINC00472-203ENST00000426635 PDE4CQ08493 712 aa21.54■■□□□ 1.04
LINC00472-203ENST00000426635 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.54■■□□□ 1.04
LINC00472-203ENST00000426635 PZPP20742 1482 aa21.54■■□□□ 1.04
LINC00472-203ENST00000426635 DAPK1P53355 1430 aa21.52■■□□□ 1.04
LINC00472-203ENST00000426635 INSRP06213 1382 aa21.52■■□□□ 1.04
LINC00472-203ENST00000426635 SMAP1Q8IYB5 467 aaPredicted RBP21.52■■□□□ 1.04
LINC00472-203ENST00000426635 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
LINC00472-203ENST00000426635 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
LINC00472-203ENST00000426635 SLFN5Q08AF3 891 aa21.51■■□□□ 1.03
LINC00472-203ENST00000426635 WDR43Q15061 677 aaKnown RBP eCLIP21.51■■□□□ 1.03
LINC00472-203ENST00000426635 CLUAP1Q96AJ1 413 aa21.51■■□□□ 1.03
LINC00472-203ENST00000426635 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
LINC00472-203ENST00000426635 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
LINC00472-203ENST00000426635 CCDC173Q0VFZ6 552 aa21.5■■□□□ 1.03
LINC00472-203ENST00000426635 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
LINC00472-203ENST00000426635 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
LINC00472-203ENST00000426635 UHRF1BP1Q6BDS2 1440 aa21.49■■□□□ 1.03
LINC00472-203ENST00000426635 PANK3Q9H999 370 aa21.49■■□□□ 1.03
LINC00472-203ENST00000426635 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
LINC00472-203ENST00000426635 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
LINC00472-203ENST00000426635 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
LINC00472-203ENST00000426635 UQCRHLA0A096LP55 91 aa21.47■■□□□ 1.03
LINC00472-203ENST00000426635 UQCRHP07919 91 aa21.47■■□□□ 1.03
LINC00472-203ENST00000426635 NASPP49321 788 aaPredicted RBP21.47■■□□□ 1.03
LINC00472-203ENST00000426635 ABCC5O15440 1437 aa21.47■■□□□ 1.03
LINC00472-203ENST00000426635 MFAP1P55081 439 aaKnown RBP21.47■■□□□ 1.03
LINC00472-203ENST00000426635 CGNL1Q0VF96 1302 aa21.47■■□□□ 1.03
LINC00472-203ENST00000426635 C22orf23Q9BZE7 217 aa21.46■■□□□ 1.03
LINC00472-203ENST00000426635 TERF1P54274 439 aa21.46■■□□□ 1.03
LINC00472-203ENST00000426635 ANP32BQ92688 251 aaKnown RBP21.46■■□□□ 1.03
LINC00472-203ENST00000426635 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
LINC00472-203ENST00000426635 HSCBQ8IWL3 235 aa21.45■■□□□ 1.02
LINC00472-203ENST00000426635 TNPO1Q92973 898 aaKnown RBP21.45■■□□□ 1.02
LINC00472-203ENST00000426635 PPP1R9BQ96SB3 815 aa21.45■■□□□ 1.02
LINC00472-203ENST00000426635 ZNF692Q9BU19 519 aaPredicted RBP21.45■■□□□ 1.02
LINC00472-203ENST00000426635 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
LINC00472-203ENST00000426635 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
LINC00472-203ENST00000426635 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
LINC00472-203ENST00000426635 SAMD9Q5K651 1589 aa21.42■■□□□ 1.02
LINC00472-203ENST00000426635 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
LINC00472-203ENST00000426635 BBXQ8WY36 941 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms