RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
RAB3GAP1-202ENST00000425393 EPAS1Q99814 870 aa13.51□□□□□ -0.25
RAB3GAP1-202ENST00000425393 COL9A1P20849 921 aa13.5□□□□□ -0.25
RAB3GAP1-202ENST00000425393 DDX12PQ92771 950 aa13.5□□□□□ -0.25
RAB3GAP1-202ENST00000425393 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
RAB3GAP1-202ENST00000425393 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
RAB3GAP1-202ENST00000425393 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
RAB3GAP1-202ENST00000425393 SPDYE16A6NNV3 312 aaPredicted RBP13.45□□□□□ -0.26
RAB3GAP1-202ENST00000425393 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
RAB3GAP1-202ENST00000425393 GOLGA8CPA6NN73 597 aa13.44□□□□□ -0.26
RAB3GAP1-202ENST00000425393 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
RAB3GAP1-202ENST00000425393 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
RAB3GAP1-202ENST00000425393 NBR1Q14596 966 aa13.43□□□□□ -0.26
RAB3GAP1-202ENST00000425393 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
RAB3GAP1-202ENST00000425393 RABGEF1Q9UJ41 708 aa13.42□□□□□ -0.26
RAB3GAP1-202ENST00000425393 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
RAB3GAP1-202ENST00000425393 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
RAB3GAP1-202ENST00000425393 PTPN5P54829 565 aa13.38□□□□□ -0.27
RAB3GAP1-202ENST00000425393 THSD4Q6ZMP0 1018 aa13.38□□□□□ -0.27
RAB3GAP1-202ENST00000425393 WNT2BQ93097 391 aa13.38□□□□□ -0.27
RAB3GAP1-202ENST00000425393 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
RAB3GAP1-202ENST00000425393 MAP3K7O43318 606 aa13.36□□□□□ -0.27
RAB3GAP1-202ENST00000425393 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
RAB3GAP1-202ENST00000425393 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
RAB3GAP1-202ENST00000425393 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
RAB3GAP1-202ENST00000425393 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
RAB3GAP1-202ENST00000425393 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
RAB3GAP1-202ENST00000425393 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
RAB3GAP1-202ENST00000425393 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
RAB3GAP1-202ENST00000425393 ANKK1Q8NFD2 765 aa13.28□□□□□ -0.28
RAB3GAP1-202ENST00000425393 OSBPP22059 807 aa13.27□□□□□ -0.29
RAB3GAP1-202ENST00000425393 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
RAB3GAP1-202ENST00000425393 KCNV2Q8TDN2 545 aa13.26□□□□□ -0.29
RAB3GAP1-202ENST00000425393 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
RAB3GAP1-202ENST00000425393 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
RAB3GAP1-202ENST00000425393 BCAMP50895 628 aa13.24□□□□□ -0.29
RAB3GAP1-202ENST00000425393 CDHR5Q9HBB8 845 aa13.24□□□□□ -0.29
RAB3GAP1-202ENST00000425393 RGS20O76081 388 aa13.23□□□□□ -0.29
RAB3GAP1-202ENST00000425393 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
RAB3GAP1-202ENST00000425393 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
RAB3GAP1-202ENST00000425393 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
RAB3GAP1-202ENST00000425393 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
RAB3GAP1-202ENST00000425393 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
RAB3GAP1-202ENST00000425393 PRSS12P56730 875 aa13.2□□□□□ -0.3
RAB3GAP1-202ENST00000425393 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
RAB3GAP1-202ENST00000425393 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
RAB3GAP1-202ENST00000425393 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
RAB3GAP1-202ENST00000425393 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
RAB3GAP1-202ENST00000425393 A0A0G2JS52 829 aa13.14□□□□□ -0.31
RAB3GAP1-202ENST00000425393 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
RAB3GAP1-202ENST00000425393 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
RAB3GAP1-202ENST00000425393 SMAPO00193 183 aa13.13□□□□□ -0.31
RAB3GAP1-202ENST00000425393 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
RAB3GAP1-202ENST00000425393 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
RAB3GAP1-202ENST00000425393 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
RAB3GAP1-202ENST00000425393 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
RAB3GAP1-202ENST00000425393 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
RAB3GAP1-202ENST00000425393 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
RAB3GAP1-202ENST00000425393 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
RAB3GAP1-202ENST00000425393 TATDN2Q93075 761 aa13.1□□□□□ -0.31
RAB3GAP1-202ENST00000425393 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
RAB3GAP1-202ENST00000425393 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
RAB3GAP1-202ENST00000425393 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
RAB3GAP1-202ENST00000425393 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
RAB3GAP1-202ENST00000425393 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
RAB3GAP1-202ENST00000425393 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
RAB3GAP1-202ENST00000425393 NUDT18Q6ZVK8 323 aa13.06□□□□□ -0.32
RAB3GAP1-202ENST00000425393 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
RAB3GAP1-202ENST00000425393 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
RAB3GAP1-202ENST00000425393 SEMA3EO15041 775 aa13.01□□□□□ -0.33
RAB3GAP1-202ENST00000425393 PTGDRQ13258 359 aa13□□□□□ -0.33
RAB3GAP1-202ENST00000425393 PPP4CP60510 307 aa12.99□□□□□ -0.33
RAB3GAP1-202ENST00000425393 KCNC4Q03721 635 aa12.98□□□□□ -0.33
RAB3GAP1-202ENST00000425393 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
RAB3GAP1-202ENST00000425393 RNF40O75150 1001 aa12.94□□□□□ -0.34
RAB3GAP1-202ENST00000425393 EYA1Q99502 592 aa12.94□□□□□ -0.34
RAB3GAP1-202ENST00000425393 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
RAB3GAP1-202ENST00000425393 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
RAB3GAP1-202ENST00000425393 SWT1Q5T5J6 900 aaKnown RBP12.92□□□□□ -0.34
RAB3GAP1-202ENST00000425393 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
RAB3GAP1-202ENST00000425393 FCHSD2O94868 740 aa12.87□□□□□ -0.35
RAB3GAP1-202ENST00000425393 APLP1P51693 650 aa12.87□□□□□ -0.35
RAB3GAP1-202ENST00000425393 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
RAB3GAP1-202ENST00000425393 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
RAB3GAP1-202ENST00000425393 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
RAB3GAP1-202ENST00000425393 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
RAB3GAP1-202ENST00000425393 MTRQ99707 1265 aa12.85□□□□□ -0.35
RAB3GAP1-202ENST00000425393 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
RAB3GAP1-202ENST00000425393 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
RAB3GAP1-202ENST00000425393 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
RAB3GAP1-202ENST00000425393 DNAJB2P25686 324 aa12.83□□□□□ -0.36
RAB3GAP1-202ENST00000425393 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
RAB3GAP1-202ENST00000425393 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
RAB3GAP1-202ENST00000425393 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
RAB3GAP1-202ENST00000425393 TMEM134Q9H6X4 195 aa12.81□□□□□ -0.36
RAB3GAP1-202ENST00000425393 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
RAB3GAP1-202ENST00000425393 HIC1Q14526 733 aa12.79□□□□□ -0.36
RAB3GAP1-202ENST00000425393 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
RAB3GAP1-202ENST00000425393 GPR37O15354 613 aa12.77□□□□□ -0.37
RAB3GAP1-202ENST00000425393 Q6ZNB5 142 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms